1.
The 3rd DBCLS BioHackathon: improving life science data integration with semantic Web technologies
Toshiaki
Katayama,
Mark
D
Wilkinson,
Gos
Micklem,
Shuichi
Kawashima,
Atsuko
Yamaguchi,
Mitsuteru
Nakao,
Yasunori
Yamamoto,
Shinobu
Okamoto,
Kenta
Oouchida,
Hong-Woo
Chun,
Jan
Aerts,
Hammad
Afzal,
Erick
Antezana,
Kazuharu
Arakawa,
Bruno
Aranda,
Francois
Belleau,
Jerven
Bolleman,
Raoul
Jean
Bonnal,
Brad
Chapman,
Peter
Cock,
Tore
Eriksson,
Paul
Gordon,
Naohisa
Goto,
Kazuhiro
Hayashi,
Heiko
Horn,
Ryosuke
Ishiwata,
Eli
Kaminuma,
Arek
Kasprzyk,
Hideya
Kawaji,
Nobuhiro
Kido
et al.
Journal of Biomedical Semantics 2013, 4 :6 (11 February 2013)
Abstract | Provisional PDF
| PubMed
2.
A case-control study of physical activity patterns and risk of non-fatal myocardial infarction
Jian
Gong,
Hannia
Campos,
Joseph Mark
A
Fiecas,
Stephen
T
McGarvey,
Robert
Goldberg,
Caroline
Richardson,
Ana
Baylin
BMC Public Health 2013, 13 :122 (8 February 2013)
Abstract | Full text | PDF | PubMed
3.
Discovery and validation of cell cycle arrest biomarkers in human acute kidney injury
Kianoush
Kashani,
Ali
Al-Khafaji,
Thomas
Ardiles,
Antonio
Artigas,
Sean
M
Bagshaw,
Max
Bell,
Azra
Bihorac,
Robert
Birkhahn,
Cynthia
M
Cely,
Lakhmir
S
Chawla,
Danielle
L
Davison,
Thorsten
Feldkamp,
Lui
G
Forni,
Michelle
Gong,
Kyle
J
Gunnerson,
Michael
Haase,
James
Hackett,
Patrick
M
Honore,
Eric
AJ
Hoste,
Olivier
Joannes-Boyau,
Michael
Joannidis,
Patrick
Kim,
Jay
L
Koyner,
Daniel
T
Laskowitz,
Matthew
E
Lissauer,
Gernot
Marx,
Peter
A
McCullough,
Scott
Mullaney,
Marlies
Ostermann,
Thomas
Rimmelé,
Nathan
I
Shapiro,
Andrew
D
Shaw,
Jing
Shi,
Amy
M
Sprague,
Jean-Louis
Vincent,
Christophe
Vinsonneau
et al.
Critical Care 2013, 17 :R25 (6 February 2013)
Abstract | Provisional PDF
| PubMed | Cited on BioMed Central | F1000 Biology
|
Editor’s summary
Urine TIMP-2, and IGFBP7, two novel biomarkers for risk stratification of acute kidney injury, have been discovered and validated in more than 1000 critically ill patients.
4.
Diverse captive non-human primates with phytanic acid-deficient diets rich in plant products have substantial phytanic acid levels in their red blood cells
Ann
B
Moser,
Jody
Hey,
Patricia
K
Dranchak,
Mazen
W
Karaman,
Junsong
Zhao,
Laura
A
Cox,
Oliver
A
Ryder,
Joseph
G
Hacia
Lipids in Health and Disease 2013, 12 :10 (4 February 2013)
Abstract | Full text | PDF | PubMed
5.
Rilonacept in the treatment of acute gouty arthritis: a randomized, controlled clinical trial using indomethacin as the active comparator
Robert
A
Terkeltaub,
H Ralph
Schumacher,
John
D
Carter,
Herbert
SB
Baraf,
Robert
R
Evans,
Jian
Wang,
Shirletta
King-Davis,
Steven
P
Weinstein
Arthritis Research & Therapy 2013, 15 :R25 (1 February 2013)
Abstract | Provisional PDF
| PubMed
|
Editor’s summary
Treatment with indomethacin alone in patients with acute gout flare is more effective than treatment with rilonacept and no greater pain relief is provided when used in combination with rilonacept.
6.
Assessment of the 9p21.3 locus in severity of coronary artery disease in the presence and absence of type 2 diabetes
Natalia
V
Rivera,
Robert
Carreras-Torres,
Roberta
Roncarati,
Chiara
Viviani-Anselmi,
Francesca
De Micco,
Alessandra
Mezzelani,
Werner
Koch,
Petra
Hoppmann,
Adnan
Kastrati,
Alexandre
FR
Stewart,
Li
Chen,
Robert
Roberts,
Lennart
C
Karssen,
Najaf
Amin,
Valentina
Trimarco,
Raffaele
Izzo,
Guido
Iaccarino,
Gerolama
Condorelli,
Annibale
A
Puca,
Paolo
Pagnotta,
Flavio
Airoldi,
Bruno
Trimarco,
Cornelia
M
van Duijn,
Gianluigi
Condorelli,
Carlo
Briguori
BMC Medical Genetics 2013, 14 :11 (23 January 2013)
Abstract | Full text | PDF | PubMed
7.
A brief primer on microRNAs and their roles in angiogenesis
Sudarshan
Anand
Vascular Cell 2013, 5 :2 (16 January 2013)
Abstract | Full text | PDF | PubMed
8.
High expression of IL-17 and IL-17RE associate with poor prognosis of hepatocellular carcinoma
Rui
Liao,
Jian
Sun,
Han
Wu,
Yong
Yi,
Jia-Xing
Wang,
Hong-Wei
He,
Xiao-Yan
Cai,
Jian
Zhou,
Yun-Feng
Cheng,
Jia
Fan,
Shuang-Jian
Qiu
Journal of Experimental & Clinical Cancer Research 2013, 32 :3 (11 January 2013)
Abstract | Provisional PDF
| PubMed
9.
Time course and progression of wild type α -Synuclein accumulation in a transgenic mouse model
David
Amschl,
Jörg
Neddens,
Daniel
Havas,
Stefanie
Flunkert,
Roland
Rabl,
Heinrich
Römer,
Edward
Rockenstein,
Eliezer
Masliah,
Manfred
Windisch,
Birgit
Hutter-Paier
BMC Neuroscience 2013, 14 :6 (9 January 2013)
Abstract | Full text | PDF | PubMed
10.
2013 WSES guidelines for management of intra-abdominal infections
Massimo
Sartelli,
Pierluigi
Viale,
Fausto
Catena,
Luca
Ansaloni,
Ernest
Moore,
Mark
Malangoni,
Frederick
A
Moore,
George
Velmahos,
Raul
Coimbra,
Rao
Ivatury,
Andrew
Peitzman,
Kaoru
Koike,
Ari
Leppaniemi,
Walter
Biffl,
Clay Cothren
Burlew,
Zsolt
J
Balogh,
Ken
Boffard,
Cino
Bendinelli,
Sanjay
Gupta,
Yoram
Kluger,
Ferdinando
Agresta,
Salomone
Di Saverio,
Imtiaz
Wani,
Alex
Escalona,
Carlos
Ordonez,
Gustavo
P
Fraga,
Gerson Alves Pereira
Junior,
Miklosh
Bala,
Yunfeng
Cui,
Sanjay
Marwah
et al.
World Journal of Emergency Surgery 2013, 8 :3 (8 January 2013)
Abstract | Full text | PDF | PubMed
11.
Complicated intra-abdominal infections in a worldwide context: an observational prospective study (CIAOW Study)
Massimo
Sartelli,
Fausto
Catena,
Luca
Ansaloni,
Ernest
Moore,
Mark
Malangoni,
George
Velmahos,
Raul
Coimbra,
Kaoru
Koike,
Ari
Leppaniemi,
Walter
Biffl,
Zsolt
Balogh,
Cino
Bendinelli,
Sanjay
Gupta,
Yoram
Kluger,
Ferdinando
Agresta,
Salomone
di Saverio,
Gregorio
Tugnoli,
Elio
Jovine,
Carlos
Ordonez,
Carlos Augusto
Gomes,
Gerson Alves Pereira
Junior,
Kuo-Ching
Yuan,
Miklosh
Bala,
Miroslav
P
Peev,
Yunfeng
Cui,
Sanjay
Marwah,
Sanoop
Zachariah,
Boris
Sakakushev,
Victor
Kong,
Adamu
Ahmed
et al.
World Journal of Emergency Surgery 2013, 8 :1 (3 January 2013)
Abstract | Full text | PDF | PubMed
12.
Imaging joints for calcium pyrophosphate crystal deposition: a knock to the knees
Robert
Terkeltaub
Arthritis Research & Therapy 2012, 14 :128 (27 December 2012)
Abstract | Full text | PDF | PubMed
13.
Differential analysis of high-throughput quantitative genetic interaction data
Gordon
J
Bean,
Trey
Ideker
Genome Biology 2012, 13 :R123 (26 December 2012)
Abstract | Provisional PDF
| PubMed
|
Editor’s summary
A new method for the differential analysis of genetic interactions
14.
Multi-species data integration and gene ranking enrich significant results in an alcoholism genome-wide association study
Zhongming
Zhao,
An-Yuan
Guo,
Edwin
JCG
van den Oord,
Fazil
Aliev,
Peilin
Jia,
Howard
J
Edenberg,
Brien
P
Riley,
Danielle
M
Dick,
Jill
C
Bettinger,
Andrew
G
Davies,
Michael
S
Grotewiel,
Marc
A
Schuckit,
Arpana
Agrawal,
John
Kramer,
John
I
Nurnberger,
Kenneth
S
Kendler,
Bradley
T
Webb,
Michael
F
Miles
BMC Genomics 2012, 13 (Suppl 8):S16 (17 December 2012)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
15.
Identification of a 3-aminoimidazo[1,2-a]pyridine inhibitor of HIV-1 reverse transcriptase
Daniel
Elleder,
Thomas
J
Baiga,
Rebecca
L
Russell,
John
A
Naughton,
Stephen
H
Hughes,
Joseph
P
Noel,
John
AT
Young
Virology Journal 2012, 9 :305 (11 December 2012)
Abstract | Full text | PDF | PubMed
16.
Silencer-delimited transgenesis: NRSE/RE1 sequences promote neural-specific transgene expression in a NRSF/REST-dependent manner
Xiayang
Xie,
Jonathan
R
Mathias,
Marie-Ange
Smith,
Steven
L
Walker,
Yong
Teng,
Martin
Distel,
Reinhard
W
Köster,
Howard
I
Sirotkin,
Meera
T
Saxena,
Jeff
S
Mumm
BMC Biology 2012, 10 :93 (30 November 2012)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
Genetic tools that support in vivo manipulation are revolutionizing functional studies, in particular in the brain, but their precision can be spoiled by unwonted "off-site" expression. Xiayang Xie and colleagues deploy a neuron-restrictive silencer element to address this problem, demonstrating its efficacy when hitched to transgenes in zebrafish.
17.
Gut Pharmacomicrobiomics: the tip of an iceberg of complex interactions between drugs and gut-associated microbes
Rama
Saad,
Mariam
R
Rizkallah,
Ramy
K
Aziz
Gut Pathogens 2012, 4 :16 (30 November 2012)
Abstract | Full text | PDF | PubMed
18.
Multiple-omic data analysis of Klebsiella pneumoniae MGH 78578 reveals its transcriptional architecture and regulatory features
Joo-Hyun
Seo,
Jay Sung-Joong
Hong,
Donghyuk
Kim,
Byung-Kwan
Cho,
Tzu-Wen
Huang,
Shih-Feng
Tsai,
Bernhard
O
Palsson,
Pep
Charusanti
BMC Genomics 2012, 13 :679 (29 November 2012)
Abstract | Full text | PDF | PubMed
19.
Salinomycin induces cell death and differentiation in head and neck squamous cell carcinoma stem cells despite activation of epithelial-mesenchymal transition and Akt
Selena
Z
Kuo,
Katherine
J
Blair,
Elham
Rahimy,
Alan
Kiang,
Eric
Abhold,
Jian-Bing
Fan,
Jessica
Wang-Rodriguez,
Xabier
Altuna,
Weg
M
Ongkeko
BMC Cancer 2012, 12 :556 (24 November 2012)
Abstract | Full text | PDF | PubMed
20.
High prevalence of lipoatrophy in pre-pubertal South African children on antiretroviral therapy: a cross-sectional study
Steve
Innes,
Mark
F
Cotton,
Richard
Haubrich,
Maria
M
Conradie,
Margaret
van Niekerk,
Clair
Edson,
Helena
Rabie,
Sonia
Jain,
Xiaoying
Sun,
Ekkehard
W
Zöllner,
Stephen
Hough,
Sara
H
Browne
BMC Pediatrics 2012, 12 :183 (23 November 2012)
Abstract | Full text | PDF | PubMed
21.
Determinants of male involvement in maternal and child health services in sub-Saharan Africa: a review
John
Ditekemena,
Olivier
Koole,
Cyril
Engmann,
Richard
Matendo,
Antoinette
Tshefu,
Robert
Ryder,
Robert
Colebunders
Reproductive Health 2012, 9 :32 (21 November 2012)
Abstract | Full text | PDF | PubMed
22.
Correlates of STI symptoms among female sex workers with truck driver clients in two Mexican border towns
Nadine
E
Chen,
Steffanie
A
Strathdee,
Felipe
J
Uribe-Salas,
Thomas
L
Patterson,
Maria
Rangel,
Perth
Rosen,
Kimberly
C
Brouwer
BMC Public Health 2012, 12 :1000 (20 November 2012)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
23.
Translational benefits to patients in the post-genomic era
JG
Gleeson
Cilia 2012, 1 (Suppl 1):K1 (16 November 2012)
Full text | PDF
24.
The efficacy of vigorous-intensity exercise as an aid to smoking cessation in adults with elevated anxiety sensitivity: study protocol for a randomized controlled trial
Jasper
A J
Smits,
Michael
J
Zvolensky,
David
Rosenfield,
Bess
H
Marcus,
Timothy
S
Church,
Georita
M
Frierson,
Mark
B
Powers,
Michael
W
Otto,
Michelle
L
Davis,
Lindsey
B
DeBoer,
Nicole
F
Briceno
Trials 2012, 13 :207 (13 November 2012)
Abstract | Full text | PDF | PubMed
25.
Career perspective: John B West
John
B
West
Extreme Physiology & Medicine 2012, 1 :11 (7 November 2012)
Abstract | Full text | PDF