1.
Ginger and turmeric expressed sequence tags identify signature genes for rhizome identity and development and the biosynthesis of curcuminoids, gingerols and terpenoids
Hyun Jo
Koo,
Eric
T
McDowell,
Xiaoqiang
Ma,
Kevin
A
Greer,
Jeremy
Kapteyn,
Zhengzhi
Xie,
Anne
Descour,
HyeRan
Kim,
Yeisoo
Yu,
David
Kudrna,
Rod
A
Wing,
Carol
A
Soderlund,
David
R
Gang
BMC Plant Biology 2013, 13 :27 (15 February 2013)
Abstract | Provisional PDF
| PubMed
2.
Genetic characterization of Theileria equi infecting horses in North America: evidence for a limited source of U.S. introductions
Carina
M
Hall,
Joseph
D
Busch,
Glen
A
Scoles,
Kristina
A
Palma-Cagle,
Massaro
W
Ueti,
Lowell
S
Kappmeyer,
David
M
Wagner
Parasites & Vectors 2013, 6 :35 (11 February 2013)
Abstract | Provisional PDF
| PubMed
|
Editor’s summary
This study found North American Theileria equi were placed in two of the four previously described 18S groups. We also found a large amount of microsatellite diversity in U.S. isolates using a novel MSAT genotyping panel we developed using the first T. equi whole genome sequence. Image: Maltese cross formation within erythrocyte.
3.
FitSearch: a robust way to interpret a yeast fitness profile in terms of drug's mode-of-action
Minho
Lee,
Sangjo
Han,
Hyeshik
Chang,
Youn-Sig
Kwak,
David
M
Weller,
Dongsup
Kim
BMC Genomics 2013, 14 (Suppl 1):S6 (21 January 2013)
Abstract | Full text | PDF | PubMed
4.
Use of somatic mutations to quantify random contributions to mouse development
Wenyu
Zhou,
Yunbing
Tan,
Donovan
J
Anderson,
Eva
M
Crist,
Hannele
Ruohola-Baker,
Stephen
J
Salipante,
Marshall
S
Horwitz
BMC Genomics 2013, 14 :39 (18 January 2013)
Abstract | Full text | PDF | PubMed
5.
Saturated linkage map construction in Rubus idaeus using genotyping by sequencing and genome-independent imputation
Judson
A
Ward,
Jasbir
Bhangoo,
Felicidad
Fernández-Fernández,
Patrick
Moore,
JD
Swanson,
Roberto
Viola,
Riccardo
Velasco,
Nahla
Bassil,
Courtney
A
Weber,
Daniel
J
Sargent
BMC Genomics 2013, 14 :2 (16 January 2013)
Abstract | Full text | PDF | PubMed
6.
A specific family of interspersed repeats (SINEs) facilitates meiotic synapsis in mammals
Matthew
E
Johnson,
Ross
A
Rowsey,
Sofia
Shirley,
Catherine
VandeVoort,
Jeffrey
Bailey,
Terry
Hassold
Molecular Cytogenetics 2013, 6 :1 (1 January 2013)
Abstract | Full text | PDF | PubMed
7.
Arrhenotoky and oedipal mating in the northern fowl mite (Ornithonyssus sylviarum ) (Acari: Gamasida: Macronyssidae)
John
B
McCulloch,
Jeb
P
Owen
Parasites & Vectors 2012, 5 :281 (4 December 2012)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
The northern fowl mite is a widespread ectoparasite of birds and a pest of poultry. We report that unmated females produce male offspring and are able to mate with sons to subsequently produce both sexes. This makes all females, regardless of mating status, capable of transmitting to new hosts to initiate infestations. Image: Scanning electron micrograph of an adult, female northern fowl mite.
8.
Comparative genomics and transcriptomics of trait-gene association
Sebastián
Pierlé,
Michael
J
Dark,
Dani
Dahmen,
Guy
H
Palmer,
Kelly
A
Brayton
BMC Genomics 2012, 13 :669 (26 November 2012)
Abstract | Full text | PDF | PubMed
9.
Rapid transcriptome characterization and parsing of sequences in a non-model host-pathogen interaction; pea-Sclerotinia sclerotiorum
Xiaofeng
Zhuang,
Kevin
E
McPhee,
Tristan
E
Coram,
Tobin
L
Peever,
Martin
I
Chilvers
BMC Genomics 2012, 13 :668 (26 November 2012)
Abstract | Full text | PDF | PubMed
10.
Comparative genomic analysis and phylogenetic position of Theileria equi
Lowell
S
Kappmeyer,
Mathangi
Thiagarajan,
David
R
Herndon,
Joshua
D
Ramsay,
Elisabet
Caler,
Appolinaire
Djikeng,
Joseph
J
Gillespie,
Audrey
OT
Lau,
Eric
H
Roalson,
Joana
C
Silva,
Marta
G
Silva,
Carlos
E
Suarez,
Massaro
W
Ueti,
Vishvanath
M
Nene,
Robert
H
Mealey,
Donald
P
Knowles,
Kelly
A
Brayton
BMC Genomics 2012, 13 :603 (9 November 2012)
Abstract | Full text | PDF | PubMed
11.
The salmonid myostatin gene family: a novel model for investigating mechanisms that influence duplicate gene fate
Casey
B
Lawson,
Takumu
Niino,
Russell
A
Hermansen,
Vera
Brok-Volchanskaya,
Melissa
F
Jackson,
Dilip
K
Garikipati,
David
A
Liberles,
Buel
D
Rodgers
BMC Evolutionary Biology 2012, 12 :202 (8 October 2012)
Abstract | Full text | PDF | PubMed
12.
Epigenetic transgenerational inheritance of somatic transcriptomes and epigenetic control
regions
Michael
K
Skinner,
Mohan
Manikkam,
Md
M
Haque,
Bin
Zhang,
Marina
I
Savenkova
Genome Biology 2012, 13 :R91 (3 October 2012)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
Inherited changes in transcriptional networks associated with epimutations in rats treated with the fungicide vinclozolin
13.
Transcriptome analyses of early cucumber fruit growth identifies distinct gene modules associated with phases of development
Kaori
Ando,
Kevin
M
Carr,
Rebecca
Grumet
BMC Genomics 2012, 13 :518 (2 October 2012)
Abstract | Full text | PDF | PubMed
14.
Impacts of genetically engineered crops on pesticide use in the U.S. -- the first sixteen years
Charles
M
Benbrook
Environmental Sciences Europe 2012, 24 :24 (28 September 2012)
Abstract | Full text | PDF
15.
Behavioral and physiological female responses to male sex ratio bias in a pond-breeding amphibian
Kristine
L
Grayson,
Stephen
P
De Lisle,
Jerrah
E
Jackson,
Samuel
J
Black,
Erica
J
Crespi
Frontiers in Zoology 2012, 9 :24 (18 September 2012)
Abstract | Full text | PDF | PubMed
16.
Genome wide identification of chilling responsive microRNAs in Prunus persica
Abdelali
Barakat,
Aditya
Sriram,
Joseph
Park,
Tetyana
Zhebentyayeva,
Dorrie
Main,
Albert
Abbott
BMC Genomics 2012, 13 :481 (15 September 2012)
Abstract | Full text | PDF | PubMed
17.
Endometrial stromal beta-catenin is required for steroid-dependent mesenchymal-epithelial cross talk and decidualization
Ling
Zhang,
Amanda
L
Patterson,
Lihua
Zhang,
Jose
M
Teixeira,
James
K
Pru
Reproductive Biology and Endocrinology 2012, 10 :75 (7 September 2012)
Abstract | Full text | PDF | PubMed
18.
Analysis of Babesia bovis infection-induced gene expression changes in larvae from the cattle tick, Rhipicephalus (Boophilus) microplus
Andrew
M
Heekin,
Felix
D
Guerrero,
Kylie
G
Bendele,
Leo
Saldivar,
Glen
A
Scoles,
Cedric
Gondro,
Vishvanath
Nene,
Appolinaire
Djikeng,
Kelly
A
Brayton
Parasites & Vectors 2012, 5 :162 (7 August 2012)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
This study reports the reaction of the Rhipicephalus microplus larval transcriptome in response to infection by Babesia bovis. Our approach detected a difference in transcript levels related to protein and lipid metabolism in infected ticks versus uninfected ticks. Image: Rhipicephalus microplus feeding on a cow.
19.
Rapid selection and identification of Miscanthus genotypes with enhanced glucan and xylan yields from hydrothermal pretreatment followed by enzymatic hydrolysis
Taiying
Zhang,
Charles
E
Wyman,
Katrin
Jakob,
Bin
Yang
Biotechnology for Biofuels 2012, 5 :56 (3 August 2012)
Abstract | Full text | PDF | PubMed
20.
Silencing of Apoptosis-Inducing factor and poly(ADP-ribose) glycohydrolase reveals novel roles in breast cancer cell death after chemotherapy
Xiaoxing
Feng,
Yiran
Zhou,
Alicia
M
Proctor,
Mandi
M
Hopkins,
Mengwei
Liu,
David
W
Koh
Molecular Cancer 2012, 11 :48 (29 July 2012)
Abstract | Full text | PDF | PubMed
21.
Feasibility of filamentous fungi for biofuel production using hydrolysate from dilute sulfuric acid pretreatment of wheat straw
Yubin
Zheng,
Xiaochen
Yu,
Jijiao
Zeng,
Shulin
Chen
Biotechnology for Biofuels 2012, 5 :50 (23 July 2012)
Abstract | Full text | PDF | PubMed
22.
Modeling the chemical dynamics of chloride ion indicators
Alexander
J
Redford,
Susan
Ingram,
Alexander
Dimitrov
BMC Neuroscience 2012, 13 (Suppl 1):P113 (16 July 2012)
Full text | PDF
23.
Influence of inhibition on encoding vocalizations in the mouse auditory midbrain
Alexander
G
Dimitrov,
Graham
I
Cummins,
Zachary
M
Mayko,
Christine
V
Portfors
BMC Neuroscience 2012, 13 (Suppl 1):P72 (16 July 2012)
Full text | PDF
24.
Characterization of fatty acid modifying enzyme activity in staphylococcal mastitis isolates and other bacteria
Thea
Lu,
Joo
Park,
Kelleen
Parnell,
Larry
K
Fox,
Mark
A
McGuire
BMC Research Notes 2012, 5 :323 (22 June 2012)
Abstract | Full text | PDF | PubMed
25.
An elm EST database for identifying leaf beetle egg-induced defense genes
Kerstin
Büchel,
Eric
McDowell,
Will
Nelson,
Anne
Descour,
Jonathan
Gershenzon,
Monika
Hilker,
Carol
Soderlund,
David
R
Gang,
Trevor
Fenning,
Torsten
Meiners
BMC Genomics 2012, 13 :242 (15 June 2012)
Abstract | Full text | PDF | PubMed