51.
Dietary fat and not calcium supplementation or dairy product consumption is associated with changes in anthropometrics during a randomized, placebo-controlled energy-restriction trial
Jennifer
T
Smilowitz,
Michelle
M
Wiest,
Dorothy
Teegarden,
Michael
B
Zemel,
J Bruce
German,
Marta
D
Van Loan
Nutrition & Metabolism 2011, 8 :67 (5 October 2011)
Abstract | Full text | PDF | PubMed
52.
Validity of estimating minute-by-minute energy expenditure of continuous walking bouts by accelerometry
Erin
E
Kuffel,
Scott
E
Crouter,
Jere
D
Haas,
Edward
A
Frongillo,
David
R
Bassett
International Journal of Behavioral Nutrition and Physical Activity 2011, 8 :92 (24 August 2011)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
53.
Neighborhood disparities in stroke and myocardial infarction mortality: a GIS and spatial scan statistics approach
Ashley
Pedigo,
Tim
Aldrich,
Agricola
Odoi
BMC Public Health 2011, 11 :644 (12 August 2011)
Abstract | Full text | PDF | PubMed
54.
Comparative studies of high-throughput biological graphs
Jonathan
Reyles,
Charles
Phillips
BMC Bioinformatics 2011, 12 (Suppl 7):A12 (5 August 2011)
Full text | PDF
55.
Determining anion-quadrupole interactions among protein, DNA, and ligand molecules
Jason
B
Harris,
David
D
Jenkins,
Jonathan
Reyles,
Stephanie
Rickett,
Jordan
M
Utley,
Elizabeth
E
Howell,
Jerome
Baudry,
Robert
J
Hinde
BMC Bioinformatics 2011, 12 (Suppl 7):A5 (5 August 2011)
Full text | PDF
56.
A protocol for enumeration of aquatic viruses by epifluorescence microscopy using Anodisc™ 13 membranes
Charles
R
Budinoff,
Star
N
Loar,
Gary
R
LeCleir,
Steven
W
Wilhelm,
Alison
Buchan
BMC Microbiology 2011, 11 :168 (25 July 2011)
Abstract | Full text | PDF | PubMed
57.
ADAM: Analysis of Discrete Models of Biological Systems Using Computer Algebra
Franziska
Hinkelmann,
Madison
Brandon,
Bonny
Guang,
Rustin
McNeill,
Grigoriy
Blekherman,
Alan
Veliz-Cuba,
Reinhard
Laubenbacher
BMC Bioinformatics 2011, 12 :295 (20 July 2011)
Abstract | Full text | PDF | PubMed
58.
Switchgrass (Panicum virgatum L.) polyubiquitin gene (PvUbi1 and PvUbi2 ) promoters for use in plant transformation
David
GJ
Mann,
Zachary
R
King,
Wusheng
Liu,
Blake
L
Joyce,
Ryan
J
Percifield,
Jennifer
S
Hawkins,
Peter
R
LaFayette,
Barbara
J
Artelt,
Jason
N
Burris,
Mitra
Mazarei,
Jeffrey
L
Bennetzen,
Wayne
A
Parrott,
Charles
N
Stewart
BMC Biotechnology 2011, 11 :74 (11 July 2011)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
59.
Developmental evolution of flowering plant pollen tube cell walls: callose synthase (CalS ) gene expression patterns
Jason
M
Abercrombie,
Brian
C
O'Meara,
Andrew
R
Moffatt,
Joseph
H
Williams
EvoDevo 2011, 2 :14 (1 July 2011)
Abstract | Full text | PDF | PubMed
60.
Allometric scaling of dietary linoleic acid on changes in tissue arachidonic acid using human equivalent diets in mice
Kylie
A
Weldon,
Jay
Whelan
Nutrition & Metabolism 2011, 8 :43 (24 June 2011)
Abstract | Full text | PDF | PubMed
61.
Increasing dietary linoleic acid does not increase tissue arachidonic acid content in adults consuming Western-type diets: a systematic review
Brian
S
Rett,
Jay
Whelan
Nutrition & Metabolism 2011, 8 :36 (10 June 2011)
Abstract | Full text | PDF | PubMed
62.
SO2426 is a positive regulator of siderophore expression in Shewanella oneidensis MR-1
Kristene
L
Henne,
Xiu-Feng
Wan,
Wei
Wei,
Dorothea
K
Thompson
BMC Microbiology 2011, 11 :125 (31 May 2011)
Abstract | Full text | PDF | PubMed
63.
The nuclear envelope localization of DYT1 dystonia torsinA-Δ E requires the SUN1 LINC complex component
Michael
T
Jungwirth,
Dhivya
Kumar,
Danielle
Y
Jeong,
Rose
E
Goodchild
BMC Cell Biology 2011, 12 :24 (31 May 2011)
Abstract | Full text | PDF | PubMed
64.
A new heat propagation velocity prevails over Brownian particle velocities in determining the thermal conductivities of nanofluids
Kenneth
D
Kihm,
Chan
Chon,
Joon
Lee,
Stephen
US
Choi
Nanoscale Research Letters 2011, 6 :361 (27 April 2011)
Abstract | Full text | PDF | PubMed
65.
Population growth of Mexican free-tailed bats (Tadarida brasiliensis mexicana ) predates human agricultural activity
Amy
L
Russell,
Murray
P
Cox,
Veronica
A
Brown,
Gary
F
McCracken
BMC Evolutionary Biology 2011, 11 :88 (1 April 2011)
Abstract | Full text | PDF | PubMed
66.
Fnr (EtrA) acts as a fine-tuning regulator of anaerobic metabolism in Shewanella oneidensis MR-1
Claribel
Cruz-GarcÃa,
Alison
E
Murray,
Jorge
LM
Rodrigues,
Jeffrey
A
Gralnick,
Lee
McCue,
Margaret
F
Romine,
Frank
E
Löffler,
James
M
Tiedje
BMC Microbiology 2011, 11 :64 (30 March 2011)
Abstract | Full text | PDF | PubMed
67.
Decentralized Turbo Bayesian Compressed Sensing with Application to UWB Systems
Depeng
Yang,
Husheng
Li,
Gregory
D
Peterson
EURASIP Journal on Advances in Signal Processing 2011, 2011 :817947 (15 March 2011)
Abstract | Full text | PDF
68.
The spatial epidemiology and clinical features of reported cases of La Crosse Virus infection in West Virginia from 2003 to 2007
Andrew
D
Haddow,
Danae
Bixler,
Agricola
Odoi
BMC Infectious Diseases 2011, 11 :29 (26 January 2011)
Abstract | Full text | PDF | PubMed
69.
Genetic and genomic analysis of hyperlipidemia, obesity and diabetes using (C57BL/6J × TALLYHO/JngJ) F2 mice
Taryn
P
Stewart,
Hyoung
Kim,
Arnold
M
Saxton,
Jung
Kim
BMC Genomics 2010, 11 :713 (19 December 2010)
Abstract | Full text | PDF | PubMed
70.
T-RFPred: a nucleotide sequence size prediction tool for microbial community description based on terminal-restriction fragment length polymorphism chromatograms
Antonio
Fernà ndez-Guerra,
Alison
Buchan,
Xiaozhen
Mou,
Emilio
O
Casamayor,
José
M
González
BMC Microbiology 2010, 10 :262 (15 October 2010)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
71.
Discovering gene functional relationships using FAUN (Feature Annotation Using Nonnegative matrix factorization)
Elina
Tjioe,
Michael
W
Berry,
Ramin
Homayouni
BMC Bioinformatics 2010, 11 (Suppl 6):S14 (7 October 2010)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
72.
Feature-Based Image Comparison for Semantic Neighbor Selection in Resource-Constrained Visual Sensor Networks
Yang
Bai,
Hairong
Qi
EURASIP Journal on Image and Video Processing 2010, 2010 :469563 (26 September 2010)
Abstract | Full text | PDF
73.
Temporal diversification of Central American cichlids
C Darrin
Hulsey,
Phillip
R
Hollingsworth,
James
A
Fordyce
BMC Evolutionary Biology 2010, 10 :279 (14 September 2010)
Abstract | Full text | PDF | PubMed
74.
Translation reinitiation and development are compromised in similar ways by mutations in translation initiation factor eIF3h and the ribosomal protein RPL24
Fujun
Zhou,
Bijoyita
Roy,
Albrecht
G
von Arnim
BMC Plant Biology 2010, 10 :193 (27 August 2010)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
Mutations in the Arabidopsis translation initiation factor eIF3 and ribosomal protein RPL24 impair translation re-initiation of mRNAs containing a regulatory upstream-ORF in a similar manner leading to auxin-related development defects.
75.
Nanofibers and nanoparticles from the insect-capturing adhesive of the Sundew (Drosera ) for cell attachment
Mingjun
Zhang,
Scott
C
Lenaghan,
Lijin
Xia,
Lixin
Dong,
Wei
He,
William
R
Henson,
Xudong
Fan
Journal of Nanobiotechnology 2010, 8 :20 (18 August 2010)
Abstract | Full text | PDF | PubMed
76.
Development of tools for the automated analysis of spectra generated by tandem mass spectrometry
Sally
Ellingson,
Joe
Hughes,
Dylan
Storey,
Rick
Weber,
Nathan
VerBerkmoes
BMC Bioinformatics 2010, 11 (Suppl 4):P27 (23 July 2010)
Full text | PDF
77.
Serendipitous discoveries in microarray analysis
Sally
R
Ellingson,
Charles
A
Phillips,
Randy
Glenn,
Douglas
Swanson,
Thomas
Ha,
Daniel
Goldowitz,
Michael
A
Langston
BMC Bioinformatics 2010, 11 (Suppl 4):P24 (23 July 2010)
Full text | PDF
78.
Graph algorithms for machine learning: a case-control study based on prostate cancer populations and high throughput transcriptomic data
Gary
L
Rogers,
Pablo
Moscato,
Michael
A
Langston
BMC Bioinformatics 2010, 11 (Suppl 4):P21 (23 July 2010)
Full text | PDF
79.
Developing measures for microbial genome assembly quality control
Rachel
M
Adams,
Jason
B
Harris,
Jeremy
J
Jay,
Beth
G
Johnson,
Miriam
L
Land,
Loren
J
Hauser
BMC Bioinformatics 2010, 11 (Suppl 4):P14 (23 July 2010)
Full text | PDF
80.
Comparative functional genomic study of substrate specificity evolution of the SABATH family of methyltransferases in plants
Nan
Zhao,
Jean-Luc
Ferrer,
Xiaofeng
Zhuang,
Feng
Chen
BMC Bioinformatics 2010, 11 (Suppl 4):P7 (23 July 2010)
Full text | PDF
81.
Inferring gene coexpression networks for low dose ionizing radiation using graph theoretical algorithms and systems genetics
Sudhir
Naswa,
Gary
L
Rogers,
Rachel
M
Lynch,
Stephen
A
Kania,
Suchita
Das,
Elissa
J
Chesler,
Arnold
M
Saxton,
Brynn
H
Voy,
Michael
A
Langston
BMC Bioinformatics 2010, 11 (Suppl 4):O5 (23 July 2010)
Full text | PDF
82.
Resource Allocation with EGOS Constraint in Multicell OFDMA Communication Systems: Combating Intercell Interference
Husheng
Li
EURASIP Journal on Wireless Communications and Networking 2010, 2010 :747102 (11 July 2010)
Abstract | Full text | PDF
83.
Ultraviolet Extinction and Visible Transparency by Ivy Nanoparticles
Quanshui
Li,
Lijin
Xia,
Zhili
Zhang,
Mingjun
Zhang
Nanoscale Research Letters 2010, 5 :1487-1491 (16 June 2010)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
84.
Naturally occurring nanoparticles from English ivy: an alternative to metal-based nanoparticles for UV protection
Lijin
Xia,
Scott
C
Lenaghan,
Mingjun
Zhang,
Zhili
Zhang,
Quanshui
Li
Journal of Nanobiotechnology 2010, 8 :12 (9 June 2010)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central |
85.
Multiagent ![]()
-Learning for Aloha-Like Spectrum Access in Cognitive Radio Systems
Husheng
Li
EURASIP Journal on Wireless Communications and Networking 2010, 2010 :876216 (23 May 2010)
Abstract | Full text | PDF
86.
Proteomics reveals a core molecular response of Pseudomonas putida F1 to acute chromate challenge
Dorothea
K
Thompson,
Karuna
Chourey,
Gene
S
Wickham,
Stephanie
B
Thieman,
Nathan
C
VerBerkmoes,
Bing
Zhang,
Andrea
T
McCarthy,
Matt
A
Rudisill,
Manesh
Shah,
Robert
L
Hettich
BMC Genomics 2010, 11 :311 (19 May 2010)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
87.
Retention of low-fitness genotypes over six decades of admixture between native and introduced tiger salamanders
Jarrett
R
Johnson,
Benjamin
M
Fitzpatrick,
H Bradley
Shaffer
BMC Evolutionary Biology 2010, 10 :147 (18 May 2010)
Abstract | Full text | PDF | PubMed
88.
A high-throughput transient gene expression system for switchgrass (Panicum virgatum L.) seedlings
Xinlu
Chen,
Raymie
Equi,
Holly
Baxter,
Kyle
Berk,
Jin
Han,
Sujata
Agarwal,
Janice
Zale
Biotechnology for Biofuels 2010, 3 :9 (7 May 2010)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
89.
A high-throughput de novo sequencing approach for shotgun proteomics using high-resolution tandem mass spectrometry
Chongle
Pan,
Byung
H
Park,
William
H
McDonald,
Patricia
A
Carey,
Jillian
F
Banfield,
Nathan
C
VerBerkmoes,
Robert
L
Hettich,
Nagiza
F
Samatova
BMC Bioinformatics 2010, 11 :118 (5 March 2010)
Abstract | Full text | PDF | PubMed
90.
Bias correction and Bayesian analysis of aggregate counts in SAGE libraries
Russell
L
Zaretzki,
Michael
A
Gilchrist,
William
M
Briggs,
Artin
Armagan
BMC Bioinformatics 2010, 11 :72 (3 February 2010)
Abstract | Full text | PDF | PubMed
91.
Accurate Computation of Electric Field Enhancement Factors for Metallic Nanoparticles Using the Discrete Dipole Approximation
A
DePrince,
Robert
J
Hinde
Nanoscale Research Letters 2010, 5 :592-596 (29 January 2010)
Abstract | Full text | PDF | PubMed
92.
Comparison of threshold selection methods for microarray gene co-expression matrices
Bhavesh
R
Borate,
Elissa
J
Chesler,
Michael
A
Langston,
Arnold
M
Saxton,
Brynn
H
Voy
BMC Research Notes 2009, 2 :240 (2 December 2009)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
93.
Securing Collaborative Spectrum Sensing against Untrustworthy Secondary Users in Cognitive Radio Networks
Wenkai
Wang,
Husheng
Li,
Yan(Lindsay)
Sun,
Zhu
Han
EURASIP Journal on Advances in Signal Processing 2010, 2010 :695750 (22 November 2009)
Abstract | Full text | PDF
94.
Genetic load and transgenic mitigating genes in transgenic Brassica rapa (field mustard) × Brassica napus (oilseed rape) hybrid populations
Christy
W
Rose,
Reginald
J
Millwood,
Hong
S
Moon,
Murali
R
Rao,
Matthew
D
Halfhill,
Paul
L
Raymer,
Suzanne
I
Warwick,
Hani
Al-Ahmad,
Jonathan
Gressel,
C Neal
Stewart
BMC Biotechnology 2009, 9 :93 (31 October 2009)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
Brassica rapa (weed) x Brassica napus (crop) transgenic hybrids are less fit than B. rapa in competitive conditions, with crop alleles acting as a negative genetic load opposing transgene introgression, while a mitigating transgene is soon lost from hybrids.
95.
Novel software package for cross-platform transcriptome analysis (CPTRA)
Xin
Zhou,
Zhen
Su,
R Douglas
Sammons,
Yanhui
Peng,
Patrick
J
Tranel,
C Neal
Stewart,
Joshua
S
Yuan
BMC Bioinformatics 2009, 10 (Suppl 11):S16 (8 October 2009)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central |
96.
Threshold selection in gene co-expression networks using spectral graph theory techniques
Andy
D
Perkins,
Michael
A
Langston
BMC Bioinformatics 2009, 10 (Suppl 11):S4 (8 October 2009)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
97.
Comparative genome analysis of lignin biosynthesis gene families across the plant kingdom
Zhanyou
Xu,
Dandan
Zhang,
Jun
Hu,
Xin
Zhou,
Xia
Ye,
Kristen
L
Reichel,
Nathan
R
Stewart,
Ryan
D
Syrenne,
Xiaohan
Yang,
Peng
Gao,
Weibing
Shi,
Crissa
Doeppke,
Robert
W
Sykes,
Jason
N
Burris,
Joseph
J
Bozell,
(Max) Zong-Ming
Cheng,
Douglas
G
Hayes,
Nicole
Labbe,
Mark
Davis,
C Neal
Stewart,
Joshua
S
Yuan
BMC Bioinformatics 2009, 10 (Suppl 11):S3 (8 October 2009)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
98.
Bridging the gap between systems biology and medicine
Gilles
Clermont,
Charles
Auffray,
Yves
Moreau,
David
M
Rocke,
Daniel
Dalevi,
Devdatt
Dubhashi,
Dana
R
Marshall,
Peter
Raasch,
Frank
Dehne,
Paolo
Provero,
Jesper
Tegner,
Bruce
J
Aronow,
Michael
A
Langston,
Mikael
Benson
Genome Medicine 2009, 1 :88 (29 September 2009)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Editor’s summary
The translation of data generated by systems biology approaches into the clinic generates a series of unique questions and challenges, and should be driven by the collaboration of clinical, experimental, and computational scientists.
99.
High-level chromate resistance in Arthrobacter sp. strain FB24 requires previously uncharacterized accessory genes
Kristene
L
Henne,
Cindy
H
Nakatsu,
Dorothea
K
Thompson,
Allan
E
Konopka
BMC Microbiology 2009, 9 :199 (16 September 2009)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
100.
Restless Watchdog: Selective Quickest Spectrum Sensing in Multichannel Cognitive Radio Systems
Husheng
Li
EURASIP Journal on Advances in Signal Processing 2009, 2009 :417457 (1 September 2009)
Abstract | Full text | PDF