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1.

Research   Open Access

Whole-exome sequencing supports genetic heterogeneity in childhood apraxia of speech

Elizabeth A Worthey, Gordana Raca, Jennifer J Laffin, Brandon M Wilk, Jeremy M Harris, Kathy J Jakielski, David P Dimmock, Edythe A Strand, Lawrence D Shriberg Journal of Neurodevelopmental Disorders 2013, 5:29 (2 October 2013)

Abstract | Provisional PDF |  Editor’s summary

Whole exome sequencing (WES) of individuals with Childhood Apraxia of Speech (CAS) suggests that CAS is genetically heterogeneous, and that WES could have a potential role in the clinical and genetic diagnosis of pediatric motor speech disorders.

2.

Research   Open Access

Impact of vitamin a with zinc supplementation on malaria morbidity in Ghana

Seth Owusu-Agyei, Sam Newton, Emmanuel Mahama, Lawrence Gyabaa Febir, Martha Ali, Kwame Adjei, Kofi Tchum, Latifa Alhassan, Thabisile Moleah, Sherry A Tanumihardjo Nutrition Journal 2013, 12:131 (23 September 2013)

Abstract | Provisional PDF

3.

Research article   Open Access

Probing the ArcA regulon under aerobic/ROS conditions in Salmonella enterica serovar Typhimurium

Eduardo H Morales, Bernardo Collao, Prerak T Desai, Iván L Calderón, Fernando Gil, Roberto Luraschi, Steffen Porwollik, Michael McClelland, Claudia P Saavedra BMC Genomics 2013, 14:626 (17 September 2013)

Abstract | Full text | PDF | PubMed

4.

Research   Open Access

A detailed phenotypic analysis of immune cell populations in the bronchoalveolar lavage fluid of atopic asthmatics after segmental allergen challenge

Jonathan S Boomer, Amit D Parulekar, Brenda M Patterson, Huiqing Yin-Declue, Christine M Deppong, Seth Crockford, Nizar N Jarjour, Mario Castro, Jonathan M Green Allergy, Asthma & Clinical Immunology 2013, 9:37 (17 September 2013)

Abstract | Full text | PDF

5.

Research   Open Access

Data fusion with international large scale assessments: a case study using the OECD PISA and TALIS surveys

David Kaplan, Alyn McCarty Large-scale Assessments in Education 2013, 1:6 (16 September 2013)

Abstract | Full text | PDF

6.

Research article   Open Access

Global insights into energetic and metabolic networks in Rhodobacter sphaeroides

Saheed Imam, Daniel R Noguera, Timothy J Donohue BMC Systems Biology 2013, 7:89 (13 September 2013)

Abstract | Full text | PDF | PubMed

7.

Research   Open Access Highly Accessed

Predicting expected progeny difference for marbling score in Angus cattle using artificial neural networks and Bayesian regression models

Hayrettin Okut, Xiao-Liao Wu, Guilherme JM Rosa, Stewart Bauck, Brent Woodward, Robert D Schnabel, Jeremy F Taylor, Daniel Gianola Genetics Selection Evolution 2013, 45:34 (11 September 2013)

Abstract | Provisional PDF | PubMed

8.

Research article   Open Access

Pilot randomized trial on mindfulness training for smokers in young adult binge drinkers

James M Davis, David M Mills, Kristin A Stankevitz, Alison R Manley, Matthew R Majeskie, Stevens S Smith BMC Complementary and Alternative Medicine 2013, 13:215 (3 September 2013)

Abstract | Full text | PDF | PubMed

9.

Research   Open Access

Beyond climate-smart agriculture: toward safe operating spaces for global food systems

Henry Neufeldt, Molly Jahn, Bruce M Campbell, John R Beddington, Fabrice DeClerck, Alessandro De Pinto, Jay Gulledge, Jonathan Hellin, Mario Herrero, Andy Jarvis, David LeZaks, Holger Meinke, Todd Rosenstock, Mary Scholes, Robert Scholes, Sonja Vermeulen, Eva Wollenberg, Robert Zougmoré Agriculture & Food Security 2013, 2:12 (30 August 2013)

Abstract | Full text | PDF

10.

Research article   Open Access

ITGB5 and AGFG1 variants are associated with severity of airway responsiveness

Blanca E Himes, Weiliang Qiu, Barbara Klanderman, John Ziniti, Jody Senter-Sylvia, Stanley J Szefler, Robert F Lemanske, Jr, Robert S Zeiger, Robert C Strunk, Fernando D Martinez, Homer Boushey, Vernon M Chinchilli, Elliot Israel, David Mauger, Gerard H Koppelman, Maartje AE Nieuwenhuis, Dirkje S Postma, Judith M Vonk, Nicholas Rafaels, Nadia N Hansel, Kathleen Barnes, Benjamin Raby, Kelan G Tantisira, Scott T Weiss BMC Medical Genetics 2013, 14:86 (28 August 2013)

Abstract | Full text | PDF | PubMed

11.

Research   Open Access

Johan Turi’s animal, mineral, vegetable cures and healing practices: an in-depth analysis of Sami (Saami) folk healing one hundred years ago

Thomas A DuBois, Jonathan F Lang Journal of Ethnobiology and Ethnomedicine 2013, 9:57 (13 August 2013)

Abstract | Full text | PDF | PubMed

12.

Research article   Open Access Highly Accessed

In vitro prion protein conversion suggests risk of bighorn sheep (Ovis canadensis) to transmissible spongiform encephalopathies

Aaron R Morawski, Christina M Carlson, Haeyoon Chang, Christopher J Johnson BMC Veterinary Research 2013, 9:157 (9 August 2013)

Abstract | Full text | PDF | PubMed

13.

Research   Open Access

Associations between internet use and fitness among college students: an experience sampling approach

Megan A Moreno, Lauren A Jelenchick, Rosalind Koff, Jens C Eickhoff, Natalie Goniu, Angela Davis, Henry N Young, Elizabeth D Cox, Dimitri A Christakis Journal of Interaction Science 2013, 1:4 (9 August 2013)

Abstract | Full text | PDF

14.

Research article   Open Access Highly Accessed

Specific mutations in H5N1 mainly impact the magnitude and velocity of the host response in mice

Nicolas Tchitchek, Amie J Eisfeld, Jennifer Tisoncik-Go, Laurence Josset, Lisa E Gralinski, Christophe Bécavin, Susan C Tilton, Bobbie-Jo Webb-Robertson, Martin T Ferris, Allison L Totura, Chengjun Li, Gabriele Neumann, Thomas O Metz, Richard D Smith, Katrina M Waters, Ralph Baric, Yoshihiro Kawaoka, Michael G Katze BMC Systems Biology 2013, 7:69 (29 July 2013)

Abstract | Full text | PDF | PubMed

15.

Research   Open Access

Phenotypic selection of a wild Saccharomyces cerevisiae strain for simultaneous saccharification and co-fermentation of AFEX™ pretreated corn stover

Mingjie Jin, Cory Sarks, Christa Gunawan, Benjamin D Bice, Shane P Simonett, Ragothaman Avanasi Narasimhan, Laura B Willis, Bruce E Dale, Venkatesh Balan, Trey K Sato Biotechnology for Biofuels 2013, 6:108 (27 July 2013)

Abstract | Full text | PDF | PubMed

16.

Research article   Open Access Highly Accessed

Discovery of structural alterations in solid tumor oligodendroglioma by single molecule analysis

Mohana Ray, Steve Goldstein, Shiguo Zhou, Konstantinos Potamousis, Deepayan Sarkar, Michael A Newton, Elizabeth Esterberg, Christina Kendziorski, Oliver Bogler, David C Schwartz BMC Genomics 2013, 14:505 (26 July 2013)

Abstract | Full text | PDF | PubMed

17.

Research   Open Access Highly Accessed

West Nile virus methyltransferase domain interacts with protein kinase G

Julie A Keating, Dipankar Bhattacharya, Pei-Yin Lim, Shaun Falk, Bernard Weisblum, Kristen A Bernard, Mayuri Sharma, Richard J Kuhn, Rob Striker Virology Journal 2013, 10:242 (22 July 2013)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Multiple phosphorylation sites were identified in West Nile virus NS5 protein following its interaction with protein kinase G, suggesting this may enhance virus replication.

18.

Research   Open Access Highly Accessed

Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species

Keith R Bradnam, Joseph N Fass, Anton Alexandrov, Paul Baranay, Michael Bechner, Inanç Birol, Sébastien Boisvert, Jarrod A Chapman, Guillaume Chapuis, Rayan Chikhi, Hamidreza Chitsaz, Wen-Chi Chou, Jacques Corbeil, Cristian Del Fabbro, T Docking, Richard Durbin, Dent Earl, Scott Emrich, Pavel Fedotov, Nuno A Fonseca, Ganeshkumar Ganapathy, Richard A Gibbs, Sante Gnerre, Élénie Godzaridis, Steve Goldstein, Matthias Haimel, Giles Hall, David Haussler, Joseph B Hiatt, Isaac Y Ho et al. GigaScience 2013, 2:10 (22 July 2013)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Assemblathon 2 is the largest systematic assessment of how the process of genome assembly is carried out, with 21 participating teams submitting 43 entries based on data from 3 different genomes

19.

Research article   Open Access

Predictors of receiving therapy among very low birth weight 2-year olds eligible for Part C early intervention in Wisconsin

Beth McManus, Stephanie Robert, Aggie Albanese, Mona Sadek-Badawi, Mari Palta BMC Pediatrics 2013, 13:106 (11 July 2013)

Abstract | Full text | PDF | PubMed

20.

Research   Open Access

In silico analysis of the fucosylation-associated genome of the human blood fluke Schistosoma mansoni: cloning and characterization of the enzymes involved in GDP-L-fucose synthesis and Golgi import

Nathan A Peterson, Tavis K Anderson, Xiao-Jun Wu, Timothy P Yoshino Parasites & Vectors 2013, 6:201 (9 July 2013)

Abstract | Full text | PDF | PubMed |  Editor’s summary

A homology-based genome-wide bioinformatics approach was used to identify and characterize the enzymes that contribute to GDP-L-fucose synthesis and Golgi import in the human blood fluke, Schistosoma mansoni. Image: Confocal laser scanning micrograph showing the distribution of GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase (GMER) immunoreactivity in a miracidium of Schistosoma mansoni.

21.

Methodology   Open Access Highly Accessed

A quantitative infection assay for human type I, II, and III interferon antiviral activities

Emily Voigt, Bahar İnankur, Ashley Baltes, John Yin Virology Journal 2013, 10:224 (6 July 2013)

Abstract | Full text | PDF | PubMed

22.

Research   Open Access

A phase II study of sorafenib (BAY 43–9006) in recurrent diffuse large B cell lymphoma: an eastern cooperative oncology group study (E1404)

Daniel R Greenwald, Hailun Li, Selina M Luger, Ronald S Go, David King, Taral Patel, Randy D Gascoyne, Jill Kolesar, Brad S Kahl, Sandra Horning Journal of Hematology & Oncology 2013, 6:46 (5 July 2013)

Abstract | Full text | PDF | PubMed

23.

Research article   Open Access

Gene expression differences during the heterogeneous progression of peripheral atherosclerosis in familial hypercholesterolemic swine

Martin Bahls, Christopher A Bidwell, Juan Hu, Armando Tellez, Greg L Kaluza, Juan F Granada, Christian G Krueger, Jess D Reed, M Laughlin, William G Van Alstine, Sean C Newcomer BMC Genomics 2013, 14:443 (3 July 2013)

Abstract | Full text | PDF | PubMed

24.

Research   Open Access

A clinical study of serum lipid disturbance in Chinese patients with sudden deafness

Tingwen Weng, Erin E Devine, Hongming Xu, Zhisong Yan, Pin Dong Lipids in Health and Disease 2013, 12:95 (3 July 2013)

Abstract | Full text | PDF | PubMed

25.

Meeting report   Open Access

Professional development session for early career scientists at SITC 2012

Christian M Capitini, William L Redmond, Kimberly A Shafer-Weaver Journal for ImmunoTherapy of Cancer 2013, 1:6 (27 June 2013)

Abstract | Full text | PDF

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