1.
Maximizing capture of gene co-expression relationships through pre-clustering of input expression samples: an Arabidopsis case study
F
Feltus,
Stephen
P
Ficklin,
Scott
M
Gibson,
Melissa
C
Smith
BMC Systems Biology 2013, 7 :44 (5 June 2013)
Abstract | Full text | PDF | PubMed
2.
Decreased tryptophan metabolism in patients with autism spectrum disorders
Luigi
Boccuto,
Chin-Fu
Chen,
Ayla
R
Pittman,
Cindy
D
Skinner,
Heather
J
McCartney,
Kelly
Jones,
Barry
R
Bochner,
Roger
E
Stevenson,
Charles
E
Schwartz
Molecular Autism 2013, 4 :16 (3 June 2013)
Abstract | Full text | PDF | PubMed
3.
Maternal nutrient restriction in the ewe from early to midgestation programs reduced steroidogenic enzyme expression and tended to reduce progesterone content of corpora lutea, as well as circulating progesterone in nonpregnant aged female offspring
Nathan
M
Long,
Nuermaimaiti
Tuersunjiang,
Lindsey
A
George,
Caleb
O
Lemley,
Yan
Ma,
William
J
Murdoch,
Peter
W
Nathanielsz,
Stephen
P
Ford
Reproductive Biology and Endocrinology 2013, 11 :34 (8 May 2013)
Abstract | Full text | PDF | PubMed
4.
Nanobiotechnology can boost crop production and quality: first evidence from increased plant biomass, fruit yield and phytomedicine content in bitter melon (Momordica charantia )
Chittaranjan
Kole,
Phullara
Kole,
K Manoj
Randunu,
Poonam
Choudhary,
Ramakrishna
Podila,
Pu Chun
Ke,
Apparao
M
Rao,
Richard
K
Marcus
BMC Biotechnology 2013, 13 :37 (26 April 2013)
Abstract | Full text | PDF | PubMed
5.
Staff retention after the privatization of township-village health centers: a case study from the Haimen City of East China
Jiayan
Huang,
Lu
Shi,
Yingyao
Chen
BMC Health Services Research 2013, 13 :136 (12 April 2013)
Abstract | Full text | PDF | PubMed
6.
Qualitative developmental research among low income African American adults to inform a social marketing campaign for walking
Dawn
K
Wilson,
Sara
M
St George,
Nevelyn
N
Trumpeter,
Sandra
M
Coulon,
Sarah
F
Griffin,
Abe
Wandersman,
Melinda
Forthofer,
Barney
Gadson,
Porschia
V
Brown
International Journal of Behavioral Nutrition and Physical Activity 2013, 10 :33 (5 March 2013)
Abstract | Full text | PDF | PubMed
7.
Supramolecular glucose oxidase-SWNT conjugates formed by ultrasonication: effect of tube length, functionalization and processing time
Olukayode
Karunwi,
Anthony
Guiseppi-Elie
Journal of Nanobiotechnology 2013, 11 :6 (20 February 2013)
Abstract | Full text | PDF | PubMed
8.
Characterization of the basal angiosperm Aristolochia fimbriata : a potential experimental system for genetic studies
Barbara
J
Bliss,
Stefan
Wanke,
Abdelali
Barakat,
Saravanaraj
Ayyampalayam,
Norman
Wickett,
P Kerr
Wall,
Yuannian
Jiao,
Lena
Landherr,
Paula
E
Ralph,
Yi
Hu,
Christoph
Neinhuis,
Jim
Leebens-Mack,
Kathiravetpilla
Arumuganathan,
Sandra
W
Clifton,
Siela
N
Maximova,
Hong
Ma,
Claude
W
dePamphilis
BMC Plant Biology 2013, 13 :13 (24 January 2013)
Abstract | Full text | PDF | PubMed
9.
Genome-wide prediction and analysis of human tissue-selective genes using microarray expression data
Shaolei
Teng,
Jack
Y
Yang,
Liangjiang
Wang
BMC Medical Genomics 2013, 6 (Suppl 1):S10 (23 January 2013)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
10.
Protein Nano-Object Integrator (ProNOI) for generating atomic style objects for molecular modeling
Nicholas
Smith,
Brandon
Campbell,
Lin
Li,
Chuan
Li,
Emil
Alexov
BMC Structural Biology 2012, 12 :31 (5 December 2012)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
Protein Nano-Object Integrator (ProNOI) is a novel software tool for generating atomic-style nano shapes in conjunction with biological macromolecules, allowing users to manipulate shape, dimension and position, and charge objects with user-specified charge density.
11.
Bioenergy grass feedstock: current options and prospects for trait improvement using emerging genetic, genomic, and systems biology toolkits
Frank
Feltus,
Joshua
P
Vandenbrink
Biotechnology for Biofuels 2012, 5 :80 (2 November 2012)
Abstract | Full text | PDF | PubMed
12.
Key factors influencing canine heartworm, Dirofilaria immitis , in the United States
Heidi
E
Brown,
Laura
C
Harrington,
Phillip
E
Kaufman,
Tanja
McKay,
Dwight
D
Bowman,
C
Nelson,
Dongmei
Wang,
Robert
Lund
Parasites & Vectors 2012, 5 :245 (30 October 2012)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
An examination of the Companion Animal Parasite Council¿s (CAPC) canine heartworm data to clarify the spatial prevalence of heartworm in the United States. Factors thought to influence the spatial risk of disease, as identified in a recent CAPC workshop, are discussed. Image: Spatially smoothed proportions of positive canine heartworm-antigen tests recorded by US veterinarians in 2011.
13.
Prosthesis alignment affects axial rotation motion after total knee replacement: a prospective in vivo study combining computed tomography and fluoroscopic evaluations
Melinda
K
Harman,
Scott
A
Banks,
Stephan
Kirschner,
Jörg
Lützner
BMC Musculoskeletal Disorders 2012, 13 :206 (23 October 2012)
Abstract | Full text | PDF | PubMed
14.
Expansion of cardiac ischemia/reperfusion injury after instillation of three forms of multi-walled carbon nanotubes
Rakhee
N
Urankar,
Robert
M
Lust,
Erin
Mann,
Pranita
Katwa,
Xiaojia
Wang,
Ramakrishna
Podila,
Susana
C
Hilderbrand,
Benjamin
S
Harrison,
Pengyu
Chen,
Pu
Ke,
Apparao
M
Rao,
Jared
M
Brown,
Christopher
J
Wingard
Particle and Fibre Toxicology 2012, 9 :38 (16 October 2012)
Abstract | Full text | PDF | PubMed
15.
Enhanced DPPH radical scavenging activity and DNA protection effect of litchi pericarp extract by Aspergillus awamori bioconversion
Sen
Lin,
Bao
Yang,
Feng
Chen,
Guoxiang
Jiang,
Qing
Li,
Xuewu
Duan,
Yueming
Jiang
Chemistry Central Journal 2012, 6 :108 (27 September 2012)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
16.
Genome wide identification of chilling responsive microRNAs in Prunus persica
Abdelali
Barakat,
Aditya
Sriram,
Joseph
Park,
Tetyana
Zhebentyayeva,
Dorrie
Main,
Albert
Abbott
BMC Genomics 2012, 13 :481 (15 September 2012)
Abstract | Full text | PDF | PubMed
17.
Simple and efficient methods to generate split roots and grafted plants useful for long-distance signaling studies in Medicago truncatula and other small plants
Tessema
K
Kassaw,
Julia
A
Frugoli
Plant Methods 2012, 8 :38 (12 September 2012)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
The authors describe methods for efficiently making shoot-to-root grafts and for generating plants having roots of two different genotypes. These techniques, which are applicable to a variety of species, should prove valuable for studies aimed at dissecting long distance signalling pathways controlling plant development.
18.
Modeling cuttlefish behavioural chromatophore response
Zach
Zboch,
James
Peterson
BMC Neuroscience 2012, 13 (Suppl 1):P4 (16 July 2012)
Full text | PDF
19.
The roles of abiotic factors, dispersal, and species interactions in structuring stream assemblages of black flies (Diptera: Simuliidae)
John
W
McCreadie,
Peter
H
Adler
Aquatic Biosystems 2012, 8 :14 (28 June 2012)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
The drivers of species assemblage at stream sites were found to include both biological and abiotic factors for black flies and their larvae, with results varying over spatial and temporal scales.
20.
Predicting synthetic lethal genetic interactions in Saccharomyces cerevisiae using short polypeptide clusters
Yuehua
Zhang,
Bo
Li,
Pradip
K
Srimani,
Xuewen
Chen,
Feng
Luo
Proteome Science 2012, 10 (Suppl 1):S4 (21 June 2012)
Abstract | Full text | PDF | PubMed
21.
Cytotoxic and potent CYP1 inhibitors from the marine algae Cymopolia barbata
Simone
Badal,
Winklet
Gallimore,
George
Huang,
Tzuen-Rong
Tzeng,
Rupika
Delgoda
Organic and Medicinal Chemistry Letters 2012, 2 :21 (11 June 2012)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Graphical abstract
22.
Molecular ecological network analyses
Ye
Deng,
Yi-Huei
Jiang,
Yunfeng
Yang,
Zhili
He,
Feng
Luo,
Jizhong
Zhou
BMC Bioinformatics 2012, 13 :113 (30 May 2012)
Abstract | Full text | PDF | PubMed
23.
DelPhi: a comprehensive suite for DelPhi software and associated resources
Lin
Li,
Chuan
Li,
Subhra
Sarkar,
Jie
Zhang,
Shawn
Witham,
Zhe
Zhang,
Lin
Wang,
Nicholas
Smith,
Marharyta
Petukh,
Emil
Alexov
BMC Biophysics 2012, 5 :9 (14 May 2012)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Editor’s summary
The DelPhi package is a comprehensive and user-friendly suite of tools for modelling electrostatic potentials in macromolecules using the Poisson-Boltzmann Equation, and is now enriched with additional features for greater usability.
24.
Construction of physical maps for the sex-specific regions of papaya sex chromosomes
Jong-Kuk
Na,
Jianping
Wang,
Jan
E
Murray,
Andrea
R
Gschwend,
Wenli
Zhang,
Qingyi
Yu,
Rafael
Pérez,
F
Feltus,
Cuixia
Chen,
Zdenek
Kubat,
Paul
H
Moore,
Jiming
Jiang,
Andrew
H
Paterson,
Ray
Ming
BMC Genomics 2012, 13 :176 (8 May 2012)
Abstract | Full text | PDF | PubMed
25.
Scheduling parity checks for increased throughput in early-termination, layered decoding of QC-LDPC codes on a stream processor
JaWone
A
Kennedy,
Daniel
L
Noneaker
EURASIP Journal on Wireless Communications and Networking 2012, 2012 :141 (12 April 2012)
Abstract | Full text | PDF