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Commentary
Translational bioinformatics applications in genome medicine Butte AJ Genome Med 2009, 1 :64 (29 June 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Investigations of fine-scale phylogeography in Tigriopus californicus reveal historical patterns of population divergence Willett CS, Ladner JT BMC Evolutionary Biology 2009, 9 :139 (23 June 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
The complete genome of klassevirus Greninger AL, Runckel C, Chiu CY, Haggerty T, Parsonnet J, Ganem D, DeRisi JL Virology Journal 2009, 6 :82 (18 June 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research
Monte Carlo dose verification of prostate patients treated with simultaneous integrated boost intensity modulated radiation therapy Dogan N, Mihaylov I, Wu Y, Keall PJ, Siebers JV, Hagan MP Radiation Oncology 2009, 4 :18 (15 June 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research
Molecular genetic analysis of FGFR1 signalling reveals distinct roles of MAPK and PLC Ma DK, Ponnusamy K, Song MR, Ming G, Song H Molecular Brain 2009, 2 :16 (8 June 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
Generation and analysis of transcriptomic resources for a model system on the rise: the sea anemone Aiptasia pallida and its dinoflagellate endosymbiont Sunagawa S, Wilson EC, Thaler M, Smith ML, Caruso C, Pringle JR, Weis VM, Medina M, Schwarz JA BMC Genomics 2009, 10 :258 (5 June 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Metabolic-network-driven analysis of bacterial ecological strategies Freilich S, Kreimer A, Borenstein E, Yosef N, Sharan R, Gophna U, Ruppin E Genome Biology 2009, 10 :R61 (5 June 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
118 SNPs of folate-related genes and risks of spina bifida and conotruncal heart defects Shaw GM, Lu W, Zhu H, Yang W, Briggs FBS, Carmichael SL, Barcellos LF, Lammer EJ, Finnell RH BMC Medical Genetics 2009, 10 :49 (3 June 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Inter-observer reproducibility of HER2 immunohistochemical assessment and concordance with fluorescent in situ hybridization (FISH): pathologist assessment compared to quantitative image analysis Turashvili G, Leung S, Turbin D, Montgomery K, Gilks B, West R, Carrier M, Huntsman D, Aparicio S BMC Cancer 2009, 9 :165 (29 May 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Low levels of amyloid-beta and its transporters in neonatal rats with and without hydrocephalus Deren KE, Forsyth J, Abdullah O, Hsu EW, Klinge PM, Silverberg GD, Johanson CE, McAllister JP Cerebrospinal Fluid Research 2009, 6 :4 (26 May 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
Blood autoantibody and cytokine profiles predict response to anti-tumor necrosis factor therapy in rheumatoid arthritis Hueber W, Tomooka BH, Batliwalla F, Li W, Monach PA, Tibshirani RJ, Van Vollenhoven RF, Lampa J, Saito K, Tanaka Y, Genovese MC, Klareskog L, Gregersen PK, Robinson WH Arthritis Research & Therapy 2009, 11 :R76 (21 May 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Effects of a popular exercise and weight loss program on weight loss, body composition, energy expenditure and health in obese women Kerksick C, Thomas A, Campbell B, Taylor L, Wilborn C, Marcello B, Roberts M, Pfau E, Grimstvedt M, Opusunju J, Magrans-Courtney T, Rasmussen C, Wilson R, Kreider RB Nutrition & Metabolism 2009, 6 :23 (14 May 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Correspondence
Worldwide patterns of haplotype diversity at 9p21.3, a locus associated with type 2 diabetes and coronary heart disease Silander K, Tang H, Myles S, Jakkula E, Timpson NJ, Cavalli-Sforza L, Peltonen L Genome Med 2009, 1 :51 (12 May 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Study protocol
Randomised controlled trial of a secondary prevention program for myocardial infarction patients ('ProActive Heart'): study protocol Hawkes AL, Atherton J, Taylor CB, Scuffham P, Eadie K, Miller NH, Oldenburg B BMC Cardiovascular Disorders 2009, 9 :16 (9 May 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [1 comment ]
Research article
Colocalization of connexin 36 and corticotropin-releasing hormone in the mouse brain Westberg L, Sawa E, Wang AY, Gunaydin LA, Ribeiro AC, Pfaff DW BMC Neuroscience 2009, 10 :41 (30 April 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Oncologist use of the Adjuvant! model for risk communication: a pilot study examining patient knowledge of 10-year prognosis Belkora JK, Rugo HS, Moore DH, Hutton DW, Chen DF, Esserman LJ BMC Cancer 2009, 9 :127 (28 April 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Review
All-you-can-eat: autophagy in neurodegeneration and neuroprotection Jaeger PA, Wyss-Coray T Molecular Neurodegeneration 2009, 4 :16 (6 April 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research
Kit ligand promotes first polar body extrusion of mouse preovulatory oocytes Ye Y, Kawamura K, Sasaki M, Kawamura N, Groenen P, Gelpke MDS, Rauch R, Hsueh AJW, Tanaka T Reproductive Biology and Endocrinology 2009, 7 :26 (3 April 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Review
Mental health issues in unaccompanied refugee minors Huemer J, Karnik NS, Voelkl-Kernstock S, Granditsch E, Dervic K, Friedrich MH, Steiner H Child and Adolescent Psychiatry and Mental Health 2009, 3 :13 (2 April 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
Novel insights into iron metabolism by integrating deletome and transcriptome analysis in an iron deficiency model of the yeast Saccharomyces cerevisiae Jo WJ, Kim JH, Oh E, Jaramillo D, Holman P, Loguinov AV, Arkin AP, Nislow C, Giaever G, Vulpe CD BMC Genomics 2009, 10 :130 (25 March 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Methodology
Measuring the activity of BioBrick promoters using an in vivo reference standard Kelly JR, Rubin AJ, Davis JH, Ajo-Franklin CM, Cumbers J, Czar MJ, de Mora K, Glieberman AL, Monie DD, Endy D Journal of Biological Engineering 2009, 3 :4 (20 March 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Methodology article
Digital PCR provides sensitive and absolute calibration for high throughput sequencing White RA, Blainey PC, Fan HC, Quake SR BMC Genomics 2009, 10 :116 (19 March 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
A compact VEGF signature associated with distant metastases and poor outcomes Hu Z, Fan C, Livasy C, He X, Oh DS, Ewend MG, Carey LA, Subramanian S, West R, Ikpatt F, Olopade OI, van de Rijn M, Perou CM BMC Medicine 2009, 7 :9 (16 March 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Study protocol
A model to optimize public health care and downstage breast cancer in limited-resource populations in southern Brazil. (Porto Alegre Breast Health Intervention Cohort) Caleffi M, Ribeiro RA, Filho DLD, Ashton-Prolla P, Bedin AJ, Skonieski GP, Zignani JM, Giacomazzi J, Franco LR, Graudenz M, Pohlmann P, Fernandes JG, Kivitz P, Weber B BMC Public Health 2009, 9 :83 (13 March 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Poster presentation
Strain-specific and pathogen-specific physiologic and genomic differences in murine inflammatory cardiac dysfunction Ackland G, Agrawal R, Hou C, Patterson A Critical Care 2009, 13 (Suppl 1):P370 (13 March 2009) [Full text ] [PDF ]
Research article
Smoking, drinking and body weight after re-employment: does unemployment experience and compensation make a difference? Bolton KL, Rodriguez E BMC Public Health 2009, 9 :77 (6 March 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Short Report
Rapid intracerebroventricular delivery of Cu-DOTA-etanercept after peripheral administration demonstrated by PET imaging Tobinick EL, Chen K, Chen X BMC Research Notes 2009, 2 :28 (27 February 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Genetic correction of splice site mutation in purified and enriched myoblasts isolated from mdx5cv mice Maguire K, Suzuki T, DiMatteo D, Parekh-Olmedo H, Kmiec E BMC Molecular Biology 2009, 10 :15 (23 February 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Review
Programmed cell death in host-symbiont associations, viewed through the Gene Ontology Chibucos MC, Collmer CW, Torto-Alalibo T, Gwinn-Giglio M, Lindeberg M, Li D, Tyler BM BMC Microbiology 2009, 9 (Suppl 1):S5 (19 February 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Methodology article
Short hairpin RNA-mediated knockdown of protein expression in Entamoeba histolytica Linford AS, Moreno H, Good KR, Zhang H, Singh U, Petri WA BMC Microbiology 2009, 9 :38 (17 February 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Micro-geographic risk factors for malarial infection Myers WP, Myers AP, Cox-Singh J, Lau HC, Mokuai B, Malley R Malaria Journal 2009, 8 :27 (13 February 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Introduction
Selected proceedings of the First Summit on Translational Bioinformatics 2008 Butte AJ, Sarkar IN, Ramoni M, Lussier Y, Troyanskaya O BMC Bioinformatics 2009, 10 (Suppl 2):I1 (5 February 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Ontology-driven indexing of public datasets for translational bioinformatics Shah NH, Jonquet C, Chiang AP, Butte AJ, Chen R, Musen MA BMC Bioinformatics 2009, 10 (Suppl 2):S1 (5 February 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
The "etiome": identification and clustering of human disease etiological factors Liu YI, Wise PH, Butte AJ BMC Bioinformatics 2009, 10 (Suppl 2):S14 (5 February 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Computational neuroanatomy: ontology-based representation of neural components and connectivity Rubin DL, Talos IF, Halle M, Musen MA, Kikinis R BMC Bioinformatics 2009, 10 (Suppl 2):S3 (5 February 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Pharmspresso: a text mining tool for extraction of pharmacogenomic concepts and relationships from full text Garten Y, Altman RB BMC Bioinformatics 2009, 10 (Suppl 2):S6 (5 February 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Case Report
Complete remission of primary plasma cell leukemia with bortezomib, doxorubicin, and dexamethasone: a case report Chan SM, George T, Cherry AM, Medeiros BC Cases Journal 2009, 2 :121 (4 February 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Oral presentation
Clearance of amyloid-beta in experimental neonatal hydrocephalus Kelly KD, Forsyth J, Klinge P, Silverberg G, Johanson C, McAllister JP Cerebrospinal Fluid Research 2009, 6 (Suppl 1):S26 (3 February 2009) [Abstract ] [Full text ] [PDF ]
Research
Ancient, independent evolution and distinct molecular features of the novel human T-lymphotropic virus type 4 Switzer WM, Salemi M, Qari SH, Jia H, Gray RR, Katzourakis A, Marriott SJ, Pryor KN, Wolfe ND, Burke DS, Folks TM, Heneine W Retrovirology 2009, 6 :9 (2 February 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
Protein domain organisation: adding order Kummerfeld SK, Teichmann SA BMC Bioinformatics 2009, 10 :39 (29 January 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Oral presentation
Cardiac magnetic resonance of targeted annexin-iron oxide labeling detects cardiac cell death in vivo after doxorubicin and myocardial infarction Dash R, Chan T, Yamada M, Paningbatan M, Myagmar BE, Swigart P, Simpson PC, Yang PC Journal of Cardiovascular Magnetic Resonance 2009, 11 (Suppl 1):O8 (28 January 2009) [Abstract ] [Full text ] [PDF ]
Oral presentation
Feasibility of noninvasive 3 T MRI-guided myocardial ablation with high intensity focused ultrasound Swaminathan A, Rieke V, King RL, Pauly J, Butts-Pauly K, McConnell M Journal of Cardiovascular Magnetic Resonance 2009, 11 (Suppl 1):O86 (28 January 2009) [Abstract ] [Full text ] [PDF ]
Poster presentation
7 T MRI of macrophages in mouse carotid atherosclerosis using novel nanoparticle platforms Kosuge H, Terashima M, Uchida M, Sherlock S, Tsao PS, Young MJ, Douglas T, Dai H, McConnell MV Journal of Cardiovascular Magnetic Resonance 2009, 11 (Suppl 1):P151 (28 January 2009) [Abstract ] [Full text ] [PDF ]
Poster presentation
Viability imaging of stem cell using a MRI reporter gene and MEMRI Chung J, Kee K, Perra RR, Yang PC Journal of Cardiovascular Magnetic Resonance 2009, 11 (Suppl 1):P181 (28 January 2009) [Abstract ] [Full text ] [PDF ]
Correspondence
Race and ancestry in biomedical research: exploring the challenges Caulfield T, Fullerton SM, Ali-Khan SE, Arbour L, Burchard EG, Cooper RS, Hardy BJ, Harry S, Hyde-Lay R, Kahn J, Kittles R, Koenig BA, Lee SSJ, Malinowski M, Ravitsky V, Sankar P, Scherer SW, Séguin B, Shickle D, Suarez-Kurtz G, Daar AS Genome Med 2009, 1 :8 (21 January 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Combining chemical genomics screens in yeast to reveal spectrum of effects of chemical inhibition of sphingolipid biosynthesis Kemmer D, McHardy LM, Hoon S, Rebérioux D, Giaever G, Nislow C, Roskelley CD, Roberge M BMC Microbiology 2009, 9 :9 (14 January 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Evaluation of bioluminescent imaging for noninvasive monitoring of colorectal cancer progression in the liver and its response to immunogene therapy Zabala M, Alzuguren P, Benavides C, Crettaz J, Gonzalez-Aseguinolaza G, Ortiz de Solorzano C, Gonzalez-Aparicio M, Kramer MG, Prieto J, Hernandez-Alcoceba R Molecular Cancer 2009, 8 :2 (7 January 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
Heterogeneity in the developmental potential of motor neuron progenitors revealed by clonal analysis of single cells in vitro Agalliu D, Schieren I Neural Development 2009, 4 :2 (5 January 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Commentary
A systematic approach to biomarker discovery; Preamble to "the iSBTc-FDA taskforce on immunotherapy biomarkers" Butterfield LH, Disis ML, Fox BA, Lee PP, Khleif SN, Thurin M, Trinchieri G, Wang E, Wigginton J, Chaussabel D, Coukos G, Dhodapkar M, Håkansson L, Janetzki S, Kleen TO, Kirkwood JM, Maccalli C, Maecker H, Maio M, Malyguine A, Masucci G, Palucka AK, Potter DM, Ribas A, Rivoltini L, Schendel D, Seliger B, Selvan S, Slingluff CL, Stroncek DF, et al. Journal of Translational Medicine 2008, 6 :81 (23 December 2008) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ] [1 comment ]
Research
Male reproductive development: gene expression profiling of maize anther and pollen ontogeny Ma J, Skibbe DS, Fernandes J, Walbot V Genome Biology 2008, 9 :R181 (19 December 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Software
GeneChaser: Identifying all biological and clinical conditions in which genes of interest are differentially expressed Chen R, Mallelwar R, Thosar A, Venkatasubrahmanyam S, Butte AJ BMC Bioinformatics 2008, 9 :548 (18 December 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
FitSNPs: highly differentially expressed genes are more likely to have variants associated with disease Chen R, Morgan AA, Dudley J, Deshpande T, Li L, Kodama K, Chiang AP, Butte AJ Genome Biology 2008, 9 :R170 (5 December 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Review
Regulatory T cells and their role in rheumatic diseases: a potential target for novel therapeutic development Milojevic D, Nguyen KD, Wara D, Mellins ED Pediatric Rheumatology 2008, 6 :20 (1 December 2008) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Methodology article
Unsupervised reduction of random noise in complex data by a row-specific, sorted principal component-guided method Foley JW, Katagiri F BMC Bioinformatics 2008, 9 :508 (29 November 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Risk estimation of distant metastasis in node-negative, estrogen receptor-positive breast cancer patients using an RT-PCR based prognostic expression signature Tutt A, Wang A, Rowland C, Gillett C, Lau K, Chew K, Dai H, Kwok S, Ryder K, Shu H, Springall R, Cane P, McCallie B, Kam-Morgan L, Anderson S, Buerger H, Gray J, Bennington J, Esserman L, Hastie T, Broder S, Sninsky J, Brandt B, Waldman F BMC Cancer 2008, 8 :339 (21 November 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
The C. elegans EMAP-like protein, ELP-1 is required for touch sensation and associates with microtubules and adhesion complexes Hueston JL, Herren GP, Cueva JG, Buechner M, Lundquist EA, Goodman MB, Suprenant KA BMC Developmental Biology 2008, 8 :110 (17 November 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Case Report
Radiation induced malignant histiocytoma of the contralateral breast following treatment of breast cancer: a case report and review of the literature Biswas S, Badiuddin F Cases Journal 2008, 1 :313 (17 November 2008) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
Improved identification of conserved cassette exons using Bayesian networks Sinha R, Hiller M, Pudimat R, Gausmann U, Platzer M, Backofen R BMC Bioinformatics 2008, 9 :477 (12 November 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Case Report
Leiomyosarcoma of the breast in a patient with a 10-year-history of cyclophosphamide exposure: a case report De la Pena J, Wapnir I Cases Journal 2008, 1 :301 (7 November 2008) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Method
Boolean implication networks derived from large scale, whole genome microarray datasets Sahoo D, Dill DL, Gentles AJ, Tibshirani R, Plevritis SK Genome Biology 2008, 9 :R157 (30 October 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Meeting abstract
118 Manganese guided cellular MRI enables evaluation of human stromal cell viability Yamada M, Gurney PT, Stein W, Kundu P, Smith A, Robbins RC, Yang PC Journal of Cardiovascular Magnetic Resonance 2008, 10 (Suppl 1):A19 (22 October 2008) [Abstract ] [Full text ] [PDF ]
Meeting abstract
2089 Detecting inflammation in atherosclerosis using protein cage nanoparticles as cellular imaging agents Terashima M, Uchida M, Kosuge H, Keren S, Tsao PS, Young MJ, Douglas T, McConnell MV Journal of Cardiovascular Magnetic Resonance 2008, 10 (Suppl 1):A358 (22 October 2008) [Abstract ] [Full text ] [PDF ]
Meeting abstract
2105 Graphite/metal core-shell nanocrystals as MRI contrast agents to detect vascular inflammation Kosuge H, Terashima M, Sherlock S, Lee JH, Dai H, McConnell MV Journal of Cardiovascular Magnetic Resonance 2008, 10 (Suppl 1):A374 (22 October 2008) [Abstract ] [Full text ] [PDF ]
Meeting abstract
2119 Visualization of micro-vasculature using FeCo-core/graphitic-carbon-shell nanocrystals and high-resolution 3D spiral imaging Lee JH, Terashima M, Seo WS, Kosuge H, Sherlock S, McConnell M, Nishimura D, Daiv H Journal of Cardiovascular Magnetic Resonance 2008, 10 (Suppl 1):A388 (22 October 2008) [Abstract ] [Full text ] [PDF ]
Meeting abstract
230 Manganese guided cellular MRI of human embryonic stem cell viability Yamada M, Gurney PT, Kundu P, Robbins RC, Yang PC Journal of Cardiovascular Magnetic Resonance 2008, 10 (Suppl 1):A91 (22 October 2008) [Abstract ] [Full text ] [PDF ]
Meeting abstract
232 Real-time and gated MR Doppler Santos JM, Kerr AB, Lee D, McConnell M, Hu BS, Pauly JM Journal of Cardiovascular Magnetic Resonance 2008, 10 (Suppl 1):A93 (22 October 2008) [Abstract ] [Full text ] [PDF ]
Technical advance
Expression-based Pathway Signature Analysis (EPSA): Mining publicly available microarray data for insight into human disease Tenenbaum JD, Walker MG, Utz PJ, Butte AJ BMC Medical Genomics 2008, 1 :51 (20 October 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Intraspecific divergence in sperm morphology of the green sea urchin, Strongylocentrotus droebachiensis : implications for selection in broadcast spawners Manier MK, Palumbi SR BMC Evolutionary Biology 2008, 8 :283 (13 October 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
A conserved acidic patch in the Myb domain is required for activation of an endogenous target gene and for chromatin binding Ko ER, Ko D, Chen C, Lipsick JS Molecular Cancer 2008, 7 :77 (7 October 2008) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
Pharmacokinetics and pharmacodynamics of fenoldopam mesylate for blood pressure control in pediatric patients Hammer GB, Verghese ST, Drover DR, Yaster M, Tobin JR BMC Anesthesiology 2008, 8 :6 (6 October 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Short communication
A quantitative PCR method to detect blood microRNAs associated with tumorigenesis in transgenic mice Fan AC, Goldrick MM, Ho J, Liang Y, Bachireddy P, Felsher DW Molecular Cancer 2008, 7 :74 (30 September 2008) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
Epitope spreading to citrullinated antigens in mouse models of autoimmune arthritis and demyelination Kidd BA, Ho PP, Sharpe O, Zhao X, Tomooka BH, Kanter JL, Steinman L, Robinson WH Arthritis Research & Therapy 2008, 10 :R119 (30 September 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
The rules of gene expression in plants: Organ identity and gene body methylation are key factors for regulation of gene expression in Arabidopsis thaliana Aceituno FF, Moseyko N, Rhee SY, Gutiérrez RA BMC Genomics 2008, 9 :438 (23 September 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Oral presentation
Axon/myelin traffic of Theiler's virus during persistent CNS infection Roussarie JP, Ruffie C, Edgar JM, Griffiths I, Brahic M BMC Proceedings 2008, 2 (Suppl 1):S38 (23 September 2008) [Abstract ] [Full text ] [PDF ]
Research article
Genome signature analysis of thermal virus metagenomes reveals Archaea and thermophilic signatures Pride DT, Schoenfeld T BMC Genomics 2008, 9 :420 (17 September 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Method
Model-based Analysis of ChIP-Seq (MACS) Zhang Y, Liu T, Meyer CA, Eeckhoute J, Johnson DS, Bernstein BE, Nussbaum C, Myers RM, Brown M, Li W, Liu XS Genome Biology 2008, 9 :R137 (17 September 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
The FEATURE framework for protein function annotation: modeling new functions, improving performance, and extending to novel applications Halperin I, Glazer DS, Wu S, Altman RB BMC Genomics 2008, 9 (Suppl 2):S2 (16 September 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Evaluation of text-mining systems for biology: overview of the Second BioCreative community challenge Krallinger M, Morgan A, Smith L, Leitner F, Tanabe L, Wilbur J, Hirschman L, Valencia A Genome Biology 2008, 9 (Suppl 2):S1 (1 September 2008) [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Overview of BioCreative II gene normalization Morgan AA, Lu Z, Wang X, Cohen AM, Fluck J, Ruch P, Divoli A, Fundel K, Leaman R, Hakenberg J, Sun C, Liu H, Torres R, Krauthammer M, Lau WW, Liu H, Hsu CN, Schuemie M, Cohen KB, Hirschman L Genome Biology 2008, 9 (Suppl 2):S3 (1 September 2008) [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Text mining for biology - the way forward: opinions from leading scientists Altman RB, Bergman CM, Blake J, Blaschke C, Cohen A, Gannon F, Grivell L, Hahn U, Hersh W, Hirschman L, Jensen LJ, Krallinger M, Mons B, O'Donoghue SI, Peitsch MC, Rebholz-Schuhmann D, Shatkay H, Valencia A Genome Biology 2008, 9 (Suppl 2):S7 (1 September 2008) [Full text ] [PDF ]
Study protocol
Ultra-brief intervention for problem drinkers: research protocol Cunningham JA, Neighbors C, Wild C, Humphreys K BMC Public Health 2008, 8 :298 (26 August 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Association of alleles carried at TNFA -850 and BAT1 -22 with Alzheimer's disease Gnjec A, D'Costa KJ, Laws SM, Hedley R, Balakrishnan K, Taddei K, Martins G, Paton A, Verdile G, Gandy SE, Broe GA, Brooks WS, Bennett H, Piguet O, Price P, Miklossy J, Hallmayer J, McGeer PL, Martins RN Journal of Neuroinflammation 2008, 5 :36 (20 August 2008) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
Circulating immune complexes contain citrullinated fibrinogen in rheumatoid arthritis Zhao X, Okeke NL, Sharpe O, Batliwalla FM, Lee AT, Ho PP, Tomooka BH, Gregersen PK, Robinson WH Arthritis Research & Therapy 2008, 10 :R94 (18 August 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Association of narcolepsy-cataplexy with HLA-DRB1 and DQB1 in Mexican patients: A relationship between HLA and gender is suggested Alaez C, Lin L, Flores-A H, Vazquez M, Munguia A, Mignot E, Haro R, Baker H, Gorodezky C BMC Medical Genetics 2008, 9 :79 (15 August 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Natural variation of HIV-1 group M integrase: Implications for a new class of antiretroviral inhibitors Rhee SY, Liu TF, Kiuchi M, Zioni R, Gifford RJ, Holmes SP, Shafer RW Retrovirology 2008, 5 :74 (7 August 2008) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research
The feasibility of preventing mother-to-child transmission of HIV using peer counselors in Zimbabwe Shetty AK, Marangwanda C, Stranix-Chibanda L, Chandisarewa W, Chirapa E, Mahomva A, Miller A, Simoyi M, Maldonado Y AIDS Research and Therapy 2008, 5 :17 (1 August 2008) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
A classification model to predict synergism/antagonism of cytotoxic mixtures using protein-drug docking scores Boik JC, Newman RA BMC Pharmacology 2008, 8 :13 (29 July 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Open letter
The ethics of characterizing difference: guiding principles on using racial categories in human genetics Lee SSJ, Mountain J, Koenig B, Altman R, Brown M, Camarillo A, Cavalli-Sforza L, Cho M, Eberhardt J, Feldman M, Ford R, Greely H, King R, Markus H, Satz D, Snipp M, Steele C, Underhill P Genome Biology 2008, 9 :404 (15 July 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [1 comment ]
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a novel picornavirus in pediatric stool
1 activation for self-renewal of adult neural stem cells