1.
2184 Accesses
Long trend dynamics in social media
Chunyan
Wang,
Bernardo
A
Huberman
EPJ Data Science 2012, 1 :2 (18 May 2012)
Abstract | Full text | PDF
2.
2094 Accesses
Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure
Dale
Muzzey,
Katja
Schwartz,
Jonathan
S
Weissman,
Gavin
Sherlock
Genome Biology 2013, 14 :R97 (11 September 2013)
Abstract | Provisional PDF
| PubMed
|
Editor’s summary
An assembly of a diploid Candida albicans phased genome helps detect allele-specific events and significantly expands the number of known polymorphisms
3.
1924 Accesses
Circulating tumor cells versus tumor-derived cell-free DNA: rivals or partners in cancer care in the era of single-cell analysis?
Evelyn
Kidess,
Stefanie
S
Jeffrey
Genome Medicine 2013, 5 :70 (13 August 2013)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
Evelyn Kidess and Stefanie Jeffrey muse on the future uses of cell-free DNA and circulating tumor cells in cancer care and speculate that they will be employed at different treatment steps.
4.
1884 Accesses
Comprehensive annotation of secondary metabolite biosynthetic genes and gene clusters of Aspergillus nidulans , A. fumigatus , A. niger and A. oryzae
Diane
O
Inglis,
Jonathan
Binkley,
Marek
S
Skrzypek,
Martha
B
Arnaud,
Gustavo
C
Cerqueira,
Prachi
Shah,
Farrell
Wymore,
Jennifer
R
Wortman,
Gavin
Sherlock
BMC Microbiology 2013, 13 :91 (26 April 2013)
Abstract | Full text | PDF | PubMed
5.
1857 Accesses
Transplantation of human cord blood mononuclear cells and umbilical cord-derived mesenchymal stem cells in autism
Yong-Tao
Lv,
Yun
Zhang,
Min
Liu,
Jia-na-ti
Qiuwaxi,
Paul
Ashwood,
Sungho
Cho,
Ying
Huan,
Ru-Cun
Ge,
Xing-Wang
Chen,
Zhao-Jing
Wang,
Byung-Jo
Kim,
Xiang
Hu
Journal of Translational Medicine 2013, 11 :196 (27 August 2013)
Abstract | Full text | PDF | PubMed
6.
1712 Accesses
The Stanford Health Assessment Questionnaire: Dimensions and Practical Applications
Bonnie
Bruce,
James
F
Fries
Health and Quality of Life Outcomes 2003, 1 :20 (9 June 2003)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
7.
1497 Accesses
Visual inspection with acetic acid as a cervical cancer test: accuracy validated using latent class analysis
Lynne
Gaffikin,
John
A
McGrath,
Marc
Arbyn,
Paul
D
Blumenthal
BMC Medical Research Methodology 2007, 7 :36 (31 July 2007)
Abstract | Full text | PDF | PubMed |
8.
1475 Accesses
Multiplicity of cerebrospinal fluid functions: New challenges in health and disease
Conrad
E
Johanson,
John
A
Duncan,
Petra
M
Klinge,
Thomas
Brinker,
Edward
G
Stopa,
Gerald
D
Silverberg
Cerebrospinal Fluid Research 2008, 5 :10 (14 May 2008)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
9.
1464 Accesses
A survey of enabling technologies in synthetic biology
Linda
J
Kahl,
Drew
Endy
Journal of Biological Engineering 2013, 7 :13 (10 May 2013)
Abstract | Full text | PDF | PubMed
10.
1427 Accesses
Family history of later-onset breast cancer, breast healthy behavior and invasive breast cancer among postmenopausal women: a cohort study
Robert
Gramling,
Timothy
L
Lash,
Kenneth
J
Rothman,
Howard
J
Cabral,
Rebecca
Silliman,
Mary
Roberts,
Marcia
L
Stefanick,
Rosanne
Harrigan,
Monica
L
Bertoia,
Charles
B
Eaton
Breast Cancer Research 2010, 12 :R82 (12 October 2010)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
Adhering to 'breast healthy' behaviours such as maintaining healthy body weight, being physically active and limiting alcohol intake benefited women with and without a family history of later-onset breast cancer.
11.
1237 Accesses
What determines cell size?
Wallace
F
Marshall,
Kevin
D
Young,
Matthew
Swaffer,
Elizabeth
Wood,
Paul
Nurse,
Akatsuki
Kimura,
Joseph
Frankel,
John
Wallingford,
Virginia
Walbot,
Xian
Qu,
Adrienne
HK
Roeder
BMC Biology 2012, 10 :101 (14 December 2012)
Abstract | Full text | PDF | PubMed |
|
Editor’s summary
In a Forum article in the Cell geometry series, ten experts in ten different systems explain why it matters what size a cell is, and offer ten different answers on how it is controlled – probably all of them right.
12.
1197 Accesses
Model-based Analysis of ChIP-Seq (MACS)
Yong
Zhang,
Tao
Liu,
Clifford
A
Meyer,
Jérôme
Eeckhoute,
David
S
Johnson,
Bradley
E
Bernstein,
Chad
Nusbaum,
Richard
M
Myers,
Myles
Brown,
Wei
Li,
X Shirley
Liu
Genome Biology 2008, 9 :R137 (17 September 2008)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Editor’s summary
MACS performs model-based analysis of ChIP-Seq data generated by short read sequencers.
13.
1188 Accesses
Gene expression changes with age in skin, adipose tissue, blood and brain
Daniel
Glass,
Ana
Viñuela,
Matthew
N
Davies,
Adaikalavan
Ramasamy,
Leopold
Parts,
David
Knowles,
Andrew
A
Brown,
Åsa
K
Hedman,
Kerrin
S
Small,
Alfonso
Buil,
Elin
Grundberg,
Alexandra
C
Nica,
PaolaDi
Meglio,
Frank
O
Nestle,
Mina
Ryten,
Richard
Durbin,
Mark
I
McCarthy,
Panagiotis
Deloukas,
Emmanouil
T
Dermitzakis,
Michael
E
Weale,
Veronique
Bataille,
Tim
D
Spector
Genome Biology 2013, 14 :R75 (26 July 2013)
Abstract | Provisional PDF
| PubMed
|
Editor’s summary
Analysis of microarray experiments in subjects of varying age shows that gene expression in four different tissues changes with time
14.
1179 Accesses
A method for inferring medical diagnoses from patient similarities
Assaf
Gottlieb,
Gideon
Y
Stein,
Eytan
Ruppin,
Russ
B
Altman,
Roded
Sharan
BMC Medicine 2013, 11 :194 (2 September 2013)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
A new method using detailed population based information in electronic health records, can accurately predict discharge diagnosis of patients with acute and chronic diseases and can assist physicians with medical decisions.
15.
1074 Accesses
Integrative genomic and functional profiling of the pancreatic cancer genome
A
Shain,
Keyan
Salari,
Craig
P
Giacomini,
Jonathan
R
Pollack
BMC Genomics 2013, 14 :624 (16 September 2013)
Abstract | Full text | PDF | PubMed
16.
1009 Accesses
Transcriptional profiling of long non-coding RNAs and novel transcribed regions across a diverse panel of archived human cancers
Alayne
L
Brunner,
Andrew
H
Beck,
Badreddin
Edris,
Robert
T
Sweeney,
Shirley
X
Zhu,
Rui
Li,
Kelli
Montgomery,
Sushama
Varma,
Thea
Gilks,
Xiangqian
Guo,
Joseph
W
Foley,
Daniela
M
Witten,
Craig
P
Giacomini,
Ryan
A
Flynn,
Jonathan
R
Pollack,
Robert
Tibshirani,
Howard
Y
Chang,
Matt
van de Rijn,
Robert
B
West
Genome Biology 2012, 13 :R75 (28 August 2012)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Editor’s summary
Transcript sequencings from 64 solid tumours of 17 diagnostic classes reveals cancer-specific lncRNAs
17.
982 Accesses
Specific post-translational histone modifications of neutrophil extracellular traps as immunogens and potential targets of lupus autoantibodies
Chih
Liu,
Stephanie
Tangsombatvisit,
Jacob
M
Rosenberg,
Gil
Mandelbaum,
Emily
C
Gillespie,
Or
P
Gozani,
Ash
A
Alizadeh,
Paul
J
Utz
Arthritis Research & Therapy 2012, 14 :R25 (2 February 2012)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
18.
960 Accesses
Two Pfam protein families characterized by a crystal structure of protein lpg2210 from Legionella pneumophila
Penelope
Coggill,
Ruth
Y
Eberhardt,
Robert
D
Finn,
Yuanyuan
Chang,
Lukasz
Jaroszewski,
Adam
Godzik,
Debanu
Das,
Qingping
Xu,
Herbert
L
Axelrod,
L
Aravind,
Alexey
G
Murzin,
Alex
Bateman
BMC Bioinformatics 2013, 14 :265 (3 September 2013)
Abstract | Full text | PDF | PubMed
19.
933 Accesses
All-you-can-eat: autophagy in neurodegeneration and neuroprotection
Philipp
A
Jaeger,
Tony
Wyss-Coray
Molecular Neurodegeneration 2009, 4 :16 (6 April 2009)
Abstract | Full text | PDF | PubMed
20.
927 Accesses
Microbiota's 'little helpers': bacteriophages and antibiotic-associated responses in the gut microbiome
Christine
L
Sun,
David
A
Relman
Genome Biology 2013, 14 :127 (30 July 2013)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
David Relman and Christine Sun discuss recent research into how bacteriophage mediate the impact of antibiotics on the gut microbiome
21.
888 Accesses
Rapid and sustained improvements in health-related quality of life, fatigue, and other patient-reported outcomes in rheumatoid arthritis patients treated with certolizumab pegol plus methotrexate over 1 year: results from the RAPID 1 randomized controlled trial
Vibeke
Strand,
Philip
Mease,
Gerd
R
Burmester,
Enkeleida
Nikaï,
Geoffroy
Coteur,
Ronald
van Vollenhoven,
Bernard
Combe,
Edward
C
Keystone,
Arthur
Kavanaugh
Arthritis Research & Therapy 2009, 11 :R170 (12 November 2009)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
22.
879 Accesses
The Transcription Factor Encyclopedia
Dimas
Yusuf,
Stefanie
L
Butland,
Magdalena
I
Swanson,
Eugene
Bolotin,
Amy
Ticoll,
Warren
A
Cheung,
Xiao
Cindy Zhang,
Christopher
TD
Dickman,
Debra
L
Fulton,
Jonathan
S
Lim,
Jake
M
Schnabl,
Oscar
HP
Ramos,
Mireille
Vasseur-Cognet,
Charles
N
de Leeuw,
Elizabeth
M
Simpson,
Gerhart
U
Ryffel,
Eric
W-F
Lam,
Ralf
Kist,
Miranda
SC
Wilson,
Raquel
Marco-Ferreres,
Jan
J
Brosens,
Leonardo
L
Beccari,
Paola
Bovolenta,
Bérénice
A
Benayoun,
Lara
J
Monteiro,
Helma
DC
Schwenen,
Lars
Grontved,
Elizabeth
Wederell,
Susanne
Mandrup,
Reiner
A
Veitia
et al.
Genome Biology 2012, 13 :R24 (29 March 2012)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central |
|
Editor’s summary
A high quality compendium of transcription factor data that allows researchers to add new data via a peer-review system
23.
875 Accesses
Comparison of the canine and human olfactory receptor gene repertoires
Pascale
Quignon,
Ewen
Kirkness,
Edouard
Cadieu,
Nizar
Touleimat,
Richard
Guyon,
Corinne
Renier,
Christophe
Hitte,
Catherine
André,
Claire
Fraser,
Francis
Galibert
Genome Biology 2003, 4 :R80 (28 November 2003)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Editor’s summary
In this study, 817 novel canine olfactory receptor (OR) sequences were identified, and 640 have been characterized. Of the 661 characterized OR sequences, representing half of the canine repertoire, 18% are predicted to be pseudogenes, compared with 63% in human and 20% in mouse.
24.
866 Accesses
A survey study of the association between mobile phone use and daytime sleepiness in California high school students
Nila
Nathan,
Jamie
Zeitzer
BMC Public Health 2013, 13 :840 (12 September 2013)
Abstract | Full text | PDF | PubMed
25.
849 Accesses
Generation and characterization of transgene-free human induced pluripotent stem cells and conversion to putative clinical-grade status
Jason
P
Awe,
Patrick
C
Lee,
Cyril
Ramathal,
Agustin
Vega-Crespo,
Jens
Durruthy-Durruthy,
Aaron
Cooper,
Saravanan
Karumbayaram,
William
E
Lowry,
Amander
T
Clark,
Jerome
A
Zack,
Vittorio
Sebastiano,
Donald
B
Kohn,
April
D
Pyle,
Martin
G
Martin,
Gerald
S
Lipshutz,
Patricia
E
Phelps,
Renee A Reijo
Pera,
James
A
Byrne
Stem Cell Research & Therapy 2013, 4 :87 (26 July 2013)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
Transgene-free human induced pluripotent stem cells (iPSCs) generated using the stem cell cassette vector were fully characterized, differentiated into therapeutically relevant cell lineages, and converted to putative clinical-grade conditions.