201.
Quantitative image analysis of intra-tumoral bFGF level as a molecular marker of paclitaxel resistance
Colin
T
Walsh,
Yong
Wei,
M Guillaume
Wientjes,
Jessie
LS
Au
Journal of Translational Medicine 2008, 6 :4 (18 January 2008)
Abstract | Full text | PDF | PubMed
202.
A highly sensitive and specific system for large-scale gene expression profiling
Guohong
Hu,
Qifeng
Yang,
Xiangfeng
Cui,
Gang
Yue,
Marco
A
Azaro,
Hui-Yun
Wang,
Honghua
Li
BMC Genomics 2008, 9 :9 (10 January 2008)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
203.
Specificity of DNA-binding by the FAX-1 and NHR-67 nuclear receptors of Caenorhabditis elegans is partially mediated via a subclass-specific P-box residue
Stephen
D
DeMeo,
Rebecca
M
Lombel,
Melissa
Cronin,
Eric
L
Smith,
Danielle
R
Snowflack,
Kristy
Reinert,
Sheila
Clever,
Bruce
Wightman
BMC Molecular Biology 2008, 9 :2 (7 January 2008)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
204.
Probabilistic Global Motion Estimation Based on Laplacian Two-Bit Plane Matching for Fast Digital Image Stabilization
Nam-Joon
Kim,
Hyuk-Jae
Lee,
Jae-Beom
Lee
EURASIP Journal on Advances in Signal Processing 2008, 2008 :180582 (1 January 2008)
Abstract | Full text | PDF
205.
Activity Representation Using 3D Shape Models
MohamedF
Abdelkader,
AmitK
Roy-Chowdhury,
Rama
Chellappa,
Umut
Akdemir
EURASIP Journal on Image and Video Processing 2008, 2008 :347050 (6 December 2007)
Abstract | Full text | PDF
206.
Analysis of gene expression during neurite outgrowth and regeneration
Moriah
L
Szpara,
Karen
Vranizan,
Yu
Tai,
Corey
S
Goodman,
Terence
P
Speed,
John
Ngai
BMC Neuroscience 2007, 8 :100 (23 November 2007)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
207.
A database of schemes that prioritize sites and species based on their conservation value: focusing business on biodiversity
Arthur
G
Blundell,
Tormod
V
Burkey
BMC Ecology 2007, 7 :10 (27 September 2007)
Abstract | Full text | PDF | PubMed
208.
Inferring cellular networks – a review
Florian
Markowetz,
Rainer
Spang
BMC Bioinformatics 2007, 8 (Suppl 6):S5 (27 September 2007)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
209.
Pose-Encoded Spherical Harmonics for Face Recognition and Synthesis Using a Single Image
Zhanfeng
Yue,
Wenyi
Zhao,
Rama
Chellappa
EURASIP Journal on Advances in Signal Processing 2008, 2008 :748483 (25 September 2007)
Abstract | Full text | PDF
210.
Selection of long oligonucleotides for gene expression microarrays using weighted rank-sum strategy
Guangan
Hu,
Manuel
LlinĂ¡s,
Jingguang
Li,
Peter
Preiser,
Zbynek
Bozdech
BMC Bioinformatics 2007, 8 :350 (19 September 2007)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
211.
Extensive parallelism in protein evolution
Georgii
A
Bazykin,
Fyodor
A
Kondrashov,
Michael
Brudno,
Alexander
Poliakov,
Inna
Dubchak,
Alexey
S
Kondrashov
Biology Direct 2007, 2 :20 (16 August 2007)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
212.
Portraits of breast cancer progression
Gul
S
Dalgin,
Gabriela
Alexe,
Daniel
Scanfeld,
Pablo
Tamayo,
Jill
P
Mesirov,
Shridar
Ganesan,
Charles
DeLisi,
Gyan
Bhanot
BMC Bioinformatics 2007, 8 :291 (6 August 2007)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
213.
High-throughput analysis of spatio-temporal dynamics in Dictyostelium
Satoshi
Sawai,
Xiao-Juan
Guan,
Adam
Kuspa,
Edward
C
Cox
Genome Biology 2007, 8 :R144 (21 July 2007)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
A time-lapse based approach is presented that allows a rapid examination of the spatio-temporal dynamics of Dictyostelium cell populations, enabling users to search and retrieve movies on a gene-by-gene and phenotype-by-phenotype basis.
214.
Nearest Neighbor Networks: clustering expression data based on gene neighborhoods
Curtis
Huttenhower,
Avi
I
Flamholz,
Jessica
N
Landis,
Sauhard
Sahi,
Chad
L
Myers,
Kellen
L
Olszewski,
Matthew
A
Hibbs,
Nathan
O
Siemers,
Olga
G
Troyanskaya,
Hilary
A
Coller
BMC Bioinformatics 2007, 8 :250 (12 July 2007)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
215.
Protease inhibitor associated mutations compromise the efficacy of therapy in human immunodeficiency virus – 1 (HIV-1) infected pediatric patients: a cross-sectional study
Amisha
Malhotra,
Sunanda
Gaur,
Patricia
Whitley-Williams,
Caitlin
Loomis,
Anna
Petrova
AIDS Research and Therapy 2007, 4 :15 (9 July 2007)
Abstract | Full text | PDF | PubMed
216.
Neural coding of natural stimuli: information at sub-millisecond resolution
Ilya
Nemenman,
Geoffrey
D
Lewen,
William
Bialek,
Rob
R
de Ruyter van Steveninck
BMC Neuroscience 2007, 8 (Suppl 2):S7 (6 July 2007)
Full text | PDF
217.
Cell-specific microarray profiling experiments reveal a comprehensive picture of gene expression in the C. elegans nervous system
Stephen
E
Von Stetina,
Joseph
D
Watson,
Rebecca
M
Fox,
Kellen
L
Olszewski,
W Clay
Spencer,
Peter
J
Roy,
David
M
Miller
Genome Biology 2007, 8 :R135 (5 July 2007)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Editor’s summary
A novel strategy for profiling Caenorhabditis elegans cells identifies transcripts highly enriched in either the embryonic or larval C. elegans nervous system, including 19 conserved transcripts of unknown function that are also expressed in the mammalian brain.
218.
Transcriptional recapitulation and subversion of embryonic colon development by mouse colon tumor models and human colon cancer
Sergio
Kaiser,
Young-Kyu
Park,
Jeffrey
L
Franklin,
Richard
B
Halberg,
Ming
Yu,
Walter
J
Jessen,
Johannes
Freudenberg,
Xiaodi
Chen,
Kevin
Haigis,
Anil
G
Jegga,
Sue
Kong,
Bhuvaneswari
Sakthivel,
Huan
Xu,
Timothy
Reichling,
Mohammad
Azhar,
Gregory
P
Boivin,
Reade
B
Roberts,
Anika
C
Bissahoyo,
Fausto
Gonzales,
Greg
C
Bloom,
Steven
Eschrich,
Scott
L
Carter,
Jeremy
E
Aronow,
John
Kleimeyer,
Michael
Kleimeyer,
Vivek
Ramaswamy,
Stephen
H
Settle,
Braden
Boone,
Shawn
Levy,
Jonathan
M
Graff
et al.
Genome Biology 2007, 8 :R131 (5 July 2007)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Editor’s summary
Colon tumors from four independent mouse models and 100 human colorectal cancers all exhibited striking recapitulation of embryonic colon gene expression from embryonic days 13.5-18.5.
219.
Coordinated regulation of Myc trans-activation targets by Polycomb and the Trithorax group protein Ash1
Julie
M
Goodliffe,
Michael
D
Cole,
Eric
Wieschaus
BMC Molecular Biology 2007, 8 :40 (22 May 2007)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
220.
SVM-Fold: a tool for discriminative multi-class protein fold and superfamily recognition
Iain
Melvin,
Eugene
Ie,
Rui
Kuang,
Jason
Weston,
William
Noble,
Christina
Leslie
BMC Bioinformatics 2007, 8 (Suppl 4):S2 (22 May 2007)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
221.
Adenovirus type 5 exerts genome-wide control over cellular programs governing proliferation, quiescence, and survival
Daniel
L
Miller,
Chad
L
Myers,
Brenden
Rickards,
Hilary
A
Coller,
S Jane
Flint
Genome Biology 2007, 8 :R58 (12 April 2007)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Editor’s summary
The effects of the adenovirus Ad5 on basic host cell programs, such as cell-cycle regulation, were studied in a microarray analysis of human fibroblasts. About 2,000 genes were up- or down-regulated after Ad5 infection and Ad5 infection was shown to induce reversal of the quiescence program and recapitulation of the core serum response.
222.
Early hypothermia in severely injured trauma patients is a significant risk factor for multiple organ dysfunction syndrome but not mortality
G
Beilman,
T
Nelson,
A
Nathens,
F
Moore,
P
Rhee,
J
Puyana,
E
Moore,
S
Cohn
Critical Care 2007, 11 (Suppl 2):P345 (22 March 2007)
Full text | PDF
223.
On Energy-Efficient Hierarchical Cross-Layer Design: Joint Power Control and Routing for Ad Hoc Networks
Cristina
Comaniciu,
HVincent
Poor
EURASIP Journal on Wireless Communications and Networking 2007, 2007 :060707 (14 March 2007)
Abstract | Full text | PDF
224.
Examining correlates of treatment satisfaction for injectable insulin in type 2 diabetes: lessons learned from a clinical trial comparing biphasic and basal analogues
Meryl
Brod,
David
Cobden,
Morten
Lammert,
Donald
Bushnell,
Philip
Raskin
Health and Quality of Life Outcomes 2007, 5 :8 (7 February 2007)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
225.
Intron Evolution and Information processing in the DNA polymerase α gene in spirotrichous ciliates: A hypothesis for interconversion between DNA and RNA deletion
Wei-Jen
Chang,
Victoria
M
Addis,
Anya
J
Li,
Elin
Axelsson,
David
H
Ardell,
Laura
F
Landweber
Biology Direct 2007, 2 :6 (1 February 2007)
Abstract | Full text | PDF | PubMed