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	1.	Research article Genomic reconstruction of transcriptional regulatory networks in lactic acid bacteria Dmitry A Ravcheev, Aaron A Best, Natalia V Sernova, Marat D Kazanov, Pavel S Novichkov, Dmitry A Rodionov BMC Genomics 2013, 14:94 (12 February 2013) Abstract \| Provisional PDF \| PubMed
	2.	Research Virion stiffness regulates immature HIV-1 entry Hong-Bo Pang, Liron Hevroni, Nitzan Kol, Debra M Eckert, Marianna Tsvitov, Michael S Kay, Itay Rousso Retrovirology 2013, 10:4 (10 January 2013) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary A linkage between particle stiffness and viral entry activity illustrates a novel level of regulation for viral replication.
	3.	Research Enhancement of mouse sperm motility by trophinin-binding peptide Seong Park, Jiwon Yoon, Ling Wang, Toshiaki K Shibata, Khatereh Motamedchaboki, Kyung Shim, Mun Chang, Seung Lee, Naoaki Tamura, Shingo Hatakeyama, Daita Nadano, Kazuhiro Sugihara, Michiko N Fukuda Reproductive Biology and Endocrinology 2012, 10:101 (29 November 2012) Abstract \| Full text \| PDF \| PubMed
	4.	Research article Reversal by RARα agonist Am580 of c-Myc-induced imbalance in RARα/RARγ expression during MMTV-Myc tumorigenesis Almudena Bosch, Silvina P Bertran, Yongke Lu, Avalon Garcia, Alexis M Jones, Marcia I Dawson, Eduardo F Farias Breast Cancer Research 2012, 14:R121 (24 August 2012) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	5.	Research article Cell proliferation along vascular islands during microvascular network growth Molly R Kelly-Goss, Erica R Winterer, Peter C Stapor, Ming Yang, Richard S Sweat, William B Stallcup, Geert W Schmid-Schönbein, Walter L Murfee BMC Physiology 2012, 12:7 (21 June 2012) Abstract \| Full text \| PDF \| PubMed
	6.	Research article Sorting nexin 12 interacts with BACE1 and regulates BACE1-mediated APP processing Yonghao Zhao, Yunshu Wang, Jiaye Yang, Xin Wang, Yingjun Zhao, Xian Zhang, Yun-wu Zhang Molecular Neurodegeneration 2012, 7:30 (18 June 2012) Abstract \| Full text \| PDF \| PubMed
	7.	Oral presentation OA02.01. Effect of macronutrient composition of weight loss diets on reduction of the inflammatory marker hsCRP J Nicklas, F Sacks, S Smith, M LeBoff, J Rood, G Bray, P Ridker BMC Complementary and Alternative Medicine 2012, 12(Suppl 1):O5 (12 June 2012) Full text \| PDF
	8.	Research Immunodominant fragments of myelin basic protein initiate T cell-dependent pain Huaqing Liu, Sergey A Shiryaev, Andrei V Chernov, Youngsoon Kim, Igor Shubayev, Albert G Remacle, Svetlana Baranovskaya, Vladislav S Golubkov, Alex Y Strongin, Veronica I Shubayev Journal of Neuroinflammation 2012, 9:119 (7 June 2012) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	9.	Proceedings Reversal of transforming growth factor-β induced epithelial-to-mesenchymal transition and the ZEB proteins Shreyasi Das, Bryan N Becker, F Michael Hoffmann, Janet E Mertz Fibrogenesis & Tissue Repair 2012, 5(Suppl 1):S28 (6 June 2012) Abstract \| Full text \| PDF
	10.	Poster presentation “Tasting” fructose with pancreatic beta-cells: modulation of insulin release by sweet taste receptor signaling and its role in metabolic diseases George A Kyriazis, Kathleen R Mosure, Mangala M Soundarapandian, Richard E Pratley, Björn Tyrberg BMC Proceedings 2012, 6(Suppl 3):P29 (1 June 2012) Full text \| PDF
	11.	Review Sex differences in human adipose tissues – the biology of pear shape Kalypso Karastergiou, Steven R Smith, Andrew S Greenberg, Susan K Fried Biology of Sex Differences 2012, 3:13 (31 May 2012) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	12.	Research article Early vascular deficits are correlated with delayed mammary tumorigenesis in the MMTV-PyMT transgenic mouse following genetic ablation of the NG2 proteoglycan Krissa Gibby, Weon-Kyoo You, Kuniko Kadoya, Hildur Helgadottir, Lawrence JT Young, Lesley G Ellies, Yunchao Chang, Robert D Cardiff, William B Stallcup Breast Cancer Research 2012, 14:R67 (24 April 2012) Abstract \| Full text \| PDF \| PubMed
	13.	Research Regulation of transcriptome, translation, and proteome in response to environmental stress in fission yeast Daniel H Lackner, Michael W Schmidt, Shuangding Wu, Dieter A Wolf, Jürg Bähler Genome Biology 2012, 13:R25 (18 April 2012) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary Changes in transcription and translation are measured in fission yeast exposed to different stresses to elucidate layers of gene expression control
	14.	Lecture presentation Identifying an APP-binding protein in neuronal cell death Yunwu Zhang, Huaxi Xu Molecular Neurodegeneration 2012, 7(Suppl 1):L22 (7 February 2012) Full text \| PDF \| PubMed
	15.	Research article Genome-wide analysis of hepatic LRH-1 reveals a promoter binding preference and suggests a role in regulating genes of lipid metabolism in concert with FXR Hansook Chong, Jacob Biesinger, Young-Kyo Seo, Xiaohui Xie, Timothy F Osborne BMC Genomics 2012, 13:51 (1 February 2012) Abstract \| Full text \| PDF \| PubMed
	16.	Research article Predicting outcomes of steady-state ¹³C isotope tracing experiments using Monte Carlo sampling Jan Schellenberger, Daniel C Zielinski, Wing Choi, Sunthosh Madireddi, Vasiliy Portnoy, David A Scott, Jennifer L Reed, Andrei L Osterman, Bernhard ∅ Palsson BMC Systems Biology 2012, 6:9 (30 January 2012) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary A new Monte Carlo sampling algorithm determines the capability of 13C labeling experiments to resolve fluxes in metabolic networks, and is demonstrated on an E. coli isotopomer model to determine reaction fluxes.
	17.	Research Reduced inflammation accompanies diminished myelin damage and repair in the NG2 null mouse spinal cord Karolina Kucharova, Yunchao Chang, Andrej Boor, Voon Yong, William B Stallcup Journal of Neuroinflammation 2011, 8:158 (13 November 2011) Abstract \| Full text \| PDF \| PubMed
	18.	Research article The docking protein p130Cas regulates cell sensitivity to proteasome inhibition Ming Zhao, Kristiina Vuori BMC Biology 2011, 9:73 (28 October 2011) Abstract \| Full text \| PDF \| PubMed
	19.	Research article Detailed kinetics and regulation of mammalian 2-oxoglutarate dehydrogenase Feng Qi, Ranjan K Pradhan, Ranjan K Dash, Daniel A Beard BMC Biochemistry 2011, 12:53 (26 September 2011) Abstract \| Full text \| PDF \| PubMed
	20.	Research Chromatin regulated interchange between polycomb repressive complex 2 (PRC2)-Ezh2 and PRC2-Ezh1 complexes controls myogenin activation in skeletal muscle cells Lovorka Stojic, Zuzana Jasencakova, Carolina Prezioso, Alexandra Stützer, Beatrice Bodega, Diego Pasini, Rebecca Klingberg, Chiara Mozzetta, Raphael Margueron, Pier Puri, Dirk Schwarzer, Kristian Helin, Wolfgang Fischle, Valerio Orlando Epigenetics & Chromatin 2011, 4:16 (5 September 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	21.	Research Nef-mediated enhancement of cellular activation and human immunodeficiency virus type 1 replication in primary T cells is dependent on association with p21-activated kinase 2 Kevin C Olivieri, Joya Mukerji, Dana Gabuzda Retrovirology 2011, 8:64 (5 August 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary Nef-mediated enhancement of cellular activation and viral replication in primary T cells is dependent on PAK2 and on the strength of the activating stimuli, and correlates with the ability of Nef to associate with PAK2. PAK2 is likely to play a role in Nef-mediated enhancement of viral replication and immune activation in vivo.
	22.	Software GPS-Prot: A web-based visualization platform for integrating host-pathogen interaction data Marie E Fahey, Melanie J Bennett, Cathal Mahon, Stefanie Jäger, Lars Pache, Dhiraj Kumar, Alex Shapiro, Kanury Rao, Sumit K Chanda, Charles S Craik, Alan D Frankel, Nevan J Krogan BMC Bioinformatics 2011, 12:298 (22 July 2011) Abstract \| Full text \| PDF \| PubMed
	23.	Correction Correction: Dermatan sulfate in tunicate phylogeny: Order-specific sulfation pattern and the effect of [→4IdoA(2-Sulfate)β-1→3GalNAc(4-Sulfate)β-1→] motifs in dermatan sulfate on heparin cofactor II activity Eliene O Kozlowski, Paula C Lima, Cristina P Vicente, Tito Lotufo, Xingfeng Bao, Kazuyuki Sugahara, Mauro SG Pavão BMC Biochemistry 2011, 12:37 (13 July 2011) Abstract \| Full text \| PDF \| PubMed
	24.	Research *Comparative genomic reconstruction of transcriptional networks controlling central metabolism in the Shewanella* genus** Dmitry A Rodionov, Pavel S Novichkov, Elena D Stavrovskaya, Irina A Rodionova, Xiaoqing Li, Marat D Kazanov, Dmitry A Ravcheev, Anna V Gerasimova, Alexey E Kazakov, Galina Kovaleva, Elizabeth A Permina, Olga N Laikova, Ross Overbeek, Margaret F Romine, James K Fredrickson, Adam P Arkin, Inna Dubchak, Andrei L Osterman, Mikhail S Gelfand BMC Genomics 2011, 12(Suppl 1):S3 (15 June 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	25.	Research article Dermatan sulfate in tunicate phylogeny: Order-specific sulfation pattern and the effect of [→4IdoA(2-Sulfate)β-1→3GalNAc(4-Sulfate)β-1→] motifs in dermatan sulfate on heparin cofactor II activity Eliene O Kozlowski, Paula C Lima, Cristina P Vicente, Tito Lotufo, Xingfeng Bao, Kazuyuki Sugahara, Mauro SG Pavão BMC Biochemistry 2011, 12:29 (29 May 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central