Alignments Example alignments of ESTs with genomic sequence. Points indicate identical bases, asterisks missing bases. Genomic sequence names start with Ppoly-G A 10 20 30 40 50 51 EL576865 .................................................. 52 EL568812 ................................. 50 EL569042 ................................. 53 EL567881 ................................. 54 EL573059 ................................. CONSENSUS AGTACGCGTTGCGCACAACTGTGTGGTTAAAAGCACGAGCTTGAAGATAT 60 70 80 90 100 51 EL576865 .................................................. 52 EL568812 .................................................. 50 EL569042 .................................................. 53 EL567881 .................................................. 54 EL573059 .................................................. CONSENSUS ATTACATTTTATACTATTGGTAGCCCTCTACAAGGTTTGTTTTCTCCTCC 110 120 130 140 150 51 EL576865 .................................................. 52 EL568812 .................................................. 50 EL569042 .................................................. 53 EL567881 .................................................. 54 EL573059 .................................................. 7 Ppoly-G-P-19.p41 .................... 92 Ppoly-G-P-2.p41 .... CONSENSUS ATTCTCCTGTTATCCAGCTTGAGAACTAGCAGGCCTTATAGTGTATGAAT 160 170 180 190 200 51 EL576865 ....********************************************** 52 EL568812 ....********************************************** 50 EL569042 ....********************************************** 53 EL567881 ....********************************************** 54 EL573059 ....********************************************** 7 Ppoly-G-P-19.p41 .................................................. 92 Ppoly-G-P-2.p41 .................................................. CONSENSUS GTTGGTATGAGTAAACAAACAATAAAACAAAGAAGAAGGATAAAAAAATA 210 220 230 240 250 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** 7 Ppoly-G-P-19.p41 .................................................. 92 Ppoly-G-P-2.p41 .................................................. CONSENSUS GGGAAAAGAAGAAAGGGAGAAGGAAGAAGAAAGCAGACGAAAGGGAGAAA 260 270 280 290 300 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** 7 Ppoly-G-P-19.p41 .................................................. 92 Ppoly-G-P-2.p41 .................................................. CONSENSUS GGAGAAAGGAGAAAGGAAGAGAAAGGAGAAAGGAAGAGAAAGGAAGAGAA 310 320 330 340 350 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** 7 Ppoly-G-P-19.p41 .................................................. 92 Ppoly-G-P-2.p41 .................................................. CONSENSUS AGGAGAAAAAAGAAAAAAGAGAAAAGAGAAAAGAGAAATGAGAAAAGAGA 360 370 380 390 400 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** 7 Ppoly-G-P-19.p41 .........c..................................cG.... 92 Ppoly-G-P-2.p41 .................................................. CONSENSUS AAAGAGAAACGAGAAAAGAGAAAAGAGAAAAGAGAAAAGAGAAACAAGAA 410 420 430 440 450 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** 7 Ppoly-G-P-19.p41 .............................c.................... 92 Ppoly-G-P-2.p41 .................................................. CONSENSUS AAGAGAAAAGAGAAAAGAGGAAAGAGAAACGAGAAAAGAGAAAAGAGAAA 460 470 480 490 500 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** 7 Ppoly-G-P-19.p41 .................................................. 92 Ppoly-G-P-2.p41 .................................................. CONSENSUS AGAGAAAAGAGAAAAGAGAAAAGAGAAAAGAGAAAAGAGAAAAGAGAAAA 510 520 530 540 550 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** 7 Ppoly-G-P-19.p41 .................................................. 92 Ppoly-G-P-2.p41 .................................................. CONSENSUS GAGAAAAGAGAAAAGAGAAAAGAGAAAAGAGAAAAGAGAAACAAGAAAAG 560 570 580 590 600 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** 7 Ppoly-G-P-19.p41 .................................................. 92 Ppoly-G-P-2.p41 .................................................. CONSENSUS AGAAAAGAGAAACGAGAAAAGAGAAAAGAGAAAAGAGAAAAGAGAAAAGA 610 620 630 640 650 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** 7 Ppoly-G-P-19.p41 .................................................. 92 Ppoly-G-P-2.p41 .................................................. -93 Ppoly-G-P-2.p51 .................................. CONSENSUS GAAAAGAGAAAAGAGAAAAGAGAAAAGAGAAAAGAGAAAAGAGAAAAGAG 660 670 680 690 700 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** 7 Ppoly-G-P-19.p41 .................................................. 92 Ppoly-G-P-2.p41 .................................................. -93 Ppoly-G-P-2.p51 .................................................. CONSENSUS AAAAGAGAAAAGAGAAAAGAGGAGAAAGAGAAAGGAGGAGGGAGAAAGGA 710 720 730 740 750 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** 7 Ppoly-G-P-19.p41 ...... 92 Ppoly-G-P-2.p41 .................................................. -93 Ppoly-G-P-2.p51 .................................................. CONSENSUS GAAAGGGGGAGAAAGGGGGAGAAAGGAGAAAGGGGGAGAAAGGAGAAAGG 760 770 780 790 800 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** 92 Ppoly-G-P-2.p41 ...... -93 Ppoly-G-P-2.p51 .................................................. CONSENSUS GGGAGAAAGGAGAAAGGGGAGAAAGGAGAAAGGGGGAGAAAGGAGAAAGG 810 820 830 840 850 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** -93 Ppoly-G-P-2.p51 .................................................. CONSENSUS GGGAGAAAGGAGAAAGGGGGAGAAAGGAGAAAGAAGAGGGGAAAGGAGAA 860 870 880 890 900 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** -93 Ppoly-G-P-2.p51 .................................................. CONSENSUS AGGAGAGGGGAAAGGAGAAAGGAGAGGGGAAAGGAGAAAGGAGAAAGGAG 910 920 930 940 950 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** -93 Ppoly-G-P-2.p51 .................................................. CONSENSUS CAAGGAGAAAAAATGGAAGAAAAGGAGAAAAGGGGAAATGGAAGGAAAGG 960 970 980 990 1000 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** -93 Ppoly-G-P-2.p51 .................................................. CONSENSUS TAAGGTAAGGGAAGGGAAGGGAAGGGAAGGGAATGAAAGGAAAGGGAATG 1010 1020 1030 1040 1050 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** -93 Ppoly-G-P-2.p51 .................................................. CONSENSUS AAAGGAAAGCAAATGAAAGGAAAGGAAGAGAAAGGAAAGAAAAGGAAAGA 1060 1070 1080 1090 1100 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** -93 Ppoly-G-P-2.p51 .................................................. CONSENSUS AAAGGAGTACACAGGAAAAGGTAAATAGAAAGAGTTATAGGCTGTTATAA 1110 1120 1130 1140 1150 51 EL576865 ************************************************.. 52 EL568812 ************************************************.. 50 EL569042 ************************************************.. 53 EL567881 ************************************************.. 54 EL573059 ************************************************.. -93 Ppoly-G-P-2.p51 .................................................. CONSENSUS AAGAGACAAATATTAAATATTAAATATTAAGCTTTACTAAATTTATAGGC 1160 1170 1180 1190 1200 51 EL576865 .................................................. 52 EL568812 .................................................. 50 EL569042 .................................................. 53 EL567881 .................................................. 54 EL573059 .................................................. -93 Ppoly-G-P-2.p51 .................................................. CONSENSUS CTTGTAAATCAAGCTAGACTAGAAAATGCCTTGAACCATCTTTTCCCTTC 1210 1220 1230 1240 1250 51 EL576865 .....********************************************* 52 EL568812 .....********************************************* 50 EL569042 .....********************************************* 53 EL567881 .....********************************************* 54 EL573059 .....********************************************* -93 Ppoly-G-P-2.p51 .................................................. 95 Ppoly-G-P-3.p52 .................... CONSENSUS TGATCATATCTTGTCCATCTCTTTCCCTCCTTTCCTTCCCTTTCATACCC 1260 1270 1280 1290 1300 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** -93 Ppoly-G-P-2.p51 .................................................. 95 Ppoly-G-P-3.p52 .................................................. CONSENSUS CTACTCTCTCTCTCTCTCACTCCTCTCATGTTGCTTTTTTATTTTTCTTG 1310 1320 1330 1340 1350 51 EL576865 *******************************************....... 52 EL568812 *******************************************....... 50 EL569042 *******************************************....... 53 EL567881 *******************************************....... 54 EL573059 *******************************************....... -93 Ppoly-G-P-2.p51 .................................................. 95 Ppoly-G-P-3.p52 .................................................. CONSENSUS CCCACTCTTTTCCTTCTTTTCTAATTCTTTGATTGATTTGCAAGGCTTAT 1360 1370 1380 1390 1400 51 EL576865 .................................................. 52 EL568812 .................................................. 50 EL569042 .................................................. 53 EL567881 .................................................. 54 EL573059 .................................................. -93 Ppoly-G-P-2.p51 ............................... 95 Ppoly-G-P-3.p52 .................................................. -8 Ppoly-G-P-19.p42 .................................. CONSENSUS AAAAAATGCAAGAAAAGCAGCCTCAATAAAAAATTCAGGGACTGGAGAAT 1410 1420 1430 1440 1450 51 EL576865 .................................................. 52 EL568812 .................................................. 50 EL569042 .................................................. 53 EL567881 .................................................. 54 EL573059 .................................................. 95 Ppoly-G-P-3.p52 .................................................. -8 Ppoly-G-P-19.p42 .................................................. CONSENSUS TTTTGGAAGTTGATTTGTGGTATCCAAATCTCAATTTGGGTTTTGAGTTC 1460 1470 1480 1490 1500 51 EL576865 ...*********************************************** 52 EL568812 ...*********************************************** 50 EL569042 ...*********************************************** 53 EL567881 ...*********************************************** 54 EL573059 ...*********************************************** 95 Ppoly-G-P-3.p52 .................................................. -8 Ppoly-G-P-19.p42 .................................................. -94 Ppoly-G-P-3.p42 .............................. CONSENSUS CAGGTACTCTTTTTTTACCTTTCCCACTCTCCCCTTACTTTTCCCTTCTT 1510 1520 1530 1540 1550 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** 95 Ppoly-G-P-3.p52 .................................................. -8 Ppoly-G-P-19.p42 .................................................. -94 Ppoly-G-P-3.p42 .................................................. CONSENSUS CCCTTCATACTCATTCTTTTCCCTTCTTGCCCTTCCCCTTCCCCTTCTTT 1560 1570 1580 1590 1600 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** 95 Ppoly-G-P-3.p52 .................................................. -8 Ppoly-G-P-19.p42 .................................................. -94 Ppoly-G-P-3.p42 .................................................. CONSENSUS CCCCCTCTTTTGTCCTCTTTCCCATGCTTTCCTTTCCCTTTTTCATCTTT 1610 1620 1630 1640 1650 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** 95 Ppoly-G-P-3.p52 .................................................. -8 Ppoly-G-P-19.p42 .................................................. -94 Ppoly-G-P-3.p42 .................................................. CONSENSUS TCTTTTCTTTCTTTTCTTTTTCTATTCTATTCTCTTTCTTCTTTTCTTTT 1660 1670 1680 1690 1700 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** 95 Ppoly-G-P-3.p52 .................................................. -8 Ppoly-G-P-19.p42 .................................................. -94 Ppoly-G-P-3.p42 .................................................. CONSENSUS CTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTCTTTTCTTTTCT 1710 1720 1730 1740 1750 51 EL576865 *************..................................... 52 EL568812 *************..................................... 50 EL569042 *************..................................... 53 EL567881 *************..................................... 54 EL573059 *************..................................... 95 Ppoly-G-P-3.p52 .................................................. -8 Ppoly-G-P-19.p42 .................................................. -94 Ppoly-G-P-3.p42 .................................................. CONSENSUS TAATGACATTTAGGATTCATATCATTACCACCCCACATGGTACTGTCAAG 1760 1770 1780 1790 1800 51 EL576865 ..............................******************** 52 EL568812 ..............................******************** 50 EL569042 ..............................******************** 53 EL567881 ..............................******************** 54 EL573059 ..............................******************** 95 Ppoly-G-P-3.p52 .................................................. -8 Ppoly-G-P-19.p42 .................................................. -94 Ppoly-G-P-3.p42 .................................................. CONSENSUS TTCCTCTCTCTGTGGTACAAGAAAGAGATAGTATCTAAAAAGTTCTGCTC 1810 1820 1830 1840 1850 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** 95 Ppoly-G-P-3.p52 .................................................. -8 Ppoly-G-P-19.p42 .................................................. -94 Ppoly-G-P-3.p42 .................................................. CONSENSUS CTTTTAGTCAGAAACTAAAATTTTATAGCAAGGTCCACATTTGCCTTCTG 1860 1870 1880 1890 1900 51 EL576865 ************************************************** 52 EL568812 ************************************************** 50 EL569042 ************************************************** 53 EL567881 ************************************************** 54 EL573059 ************************************************** 95 Ppoly-G-P-3.p52 .................................................. -8 Ppoly-G-P-19.p42 ............................................. -94 Ppoly-G-P-3.p42 .................................................. CONSENSUS AAGTATAGTTGTTAGTTAGCCTGAGTATTACACCTTTGTCTATATCATAT 1910 1920 1930 1940 1950 51 EL576865 .................................................. 52 EL568812 ..***********************************************. 50 EL569042 ..***********************************************. 53 EL567881 ..***********************************************. 54 EL573059 ..***********************************************. 95 Ppoly-G-P-3.p52 .......................... -94 Ppoly-G-P-3.p42 ..G CONSENSUS ATTTGTATTCGTGTGCAGATTGTTGGAATTGATGATGGACAACGTGGAGA 1960 1970 1980 1990 2000 51 EL576865 .................................................. 52 EL568812 .....********************************************* 50 EL569042 .....********************************************* 53 EL567881 .....********************************************* 54 EL573059 .....********************************************* CONSENSUS CCAAAGTGAAGTCCTTACCATCCTTTTGTTGTATAATATGCAACTTATCT 2010 2020 2030 2040 2050 51 EL576865 .................................................. 52 EL568812 **************************........................ 50 EL569042 **************************........................ 53 EL567881 **************************........................ 54 EL573059 **************************........................ CONSENSUS TTGATGCGCCTGATTAGAATACCTCAAGAGATTTGTTGCTACAGTATGGG 2060 2070 2080 2090 2100 51 EL576865 .................................................. 52 EL568812 .............................................C.... 50 EL569042 .................................................. 53 EL567881 .................................................. 54 EL573059 .................................................. CONSENSUS TATACACTTGTTCTCATTCCTTGCTGGTGGAATGGCACTTTGGAAAGTTT 2110 2120 2130 2140 2150 51 EL576865 ................................................ 52 EL568812 ................................................. 50 EL569042 ................................................. 53 EL567881 ................................................. 54 EL573059 ................................................. CONSENSUS ACAAGCCACCATTAACTTTCATCGACCAGATATTTTTTCTGAGAACTTT 2160 2170 2180 2190 2200 52 EL568812 .................................................. 50 EL569042 .................................................. 53 EL567881 .................................................. 54 EL573059 .................................................. CONSENSUS CCTTTAGTGATCCCATGCAACCCTTTCTTACATTTTTTCCCAGTAACAAA 2210 2220 2230 2240 2250 52 EL568812 .......N.......................................... 50 EL569042 .................................................. 53 EL567881 .................................................. 54 EL573059 .................................................. CONSENSUS CATATCAAAAAACACACAGTTGATGTTGGCATCATTCCCCAGTACTCTGG 2260 2270 2280 2290 2300 52 EL568812 ............................................N..... 50 EL569042 ............................................N..... 53 EL567881 .................................................. 54 EL573059 ..........................................*....... CONSENSUS AACTAGTTGTTGCATCCTCTCACAATCAATGGTGGCTTGGCGAAAAATAT 2310 2320 2330 2340 2350 52 EL568812 ................... 50 EL569042 ................................NN................ 53 EL567881 .................................................. 54 EL573059 .................................................. CONSENSUS GATGGTGTGAGATGCTATTGGAGACCCAATGAAAAGCAGTTATATTCAAG 2360 2370 2380 2390 2400 50 EL569042 .............................N.........N.......... 53 EL567881 .................................................. 54 EL573059 .................................................. CONSENSUS GCAAGGTCTTGTAATATCAATTTATTCTTCAAGTGTTCCAAGCAATTTAT 2410 2420 2430 2440 2450 50 EL569042 .................................................. 53 EL567881 .................................................. 54 EL573059 ......................................... CONSENSUS TTGGTGACATTGTGATGGATGGAGAAATATGGTGTGGCCGAAGATTTTTT 2460 2470 2480 2490 50 EL569042 ...............a...........a......*......... 53 EL567881 ...........................a.......... CONSENSUS TTAGAGTCACAAACAATTGTGAGCTCAACACCCAATAAAGTGGA B 10 20 30 40 50 75 EL571585 .................................................. CONSENSUS AAATAGAAGCCACACATGATTGGTATTCGGATATCTTTTTGTGCAGTGGC 60 70 80 90 100 75 EL571585 .................................................. 69 EL569325 ....................................... 63 EL577163 ...................................... -15 Ppoly-G-P-4.p12 .T.......TC................ 65 EL568516 .......................... 64 EL575396 A................. 62 EL571592 ................. CONSENSUS TAGCGCCCTTGCATTTGGCGACACCTAAAGGTCACAGGTTCGAATCCCGC 110 120 130 140 150 75 EL571585 .................................................. 69 EL569325 .................................................. 63 EL577163 .................................................. -15 Ppoly-G-P-4.p12 .................................................. 65 EL568516 .................................................. 64 EL575396 .................................................. 62 EL571592 .................................................. 66 EL575240 ....................................... 18 Ppoly-G-P-4.p11 .....**A.............*........... CONSENSUS CGCAGCTACTCAAAGCTGTACATATTACCTTATGGCATAAAGTGCACCGA 160 170 180 190 200 75 EL571585 .............................********************* 69 EL569325 .............................********************* 63 EL577163 .................................................. -15 Ppoly-G-P-4.p12 .................................................. 65 EL568516 .................................................. 64 EL575396 .................................................. 62 EL571592 .................................................. 66 EL575240 .................................................. 18 Ppoly-G-P-4.p11 ......................TA.C........................ CONSENSUS GGCTCAGAAATGATGAGGGCCAGTATAGTGTATCCATTAAGGAGTGGGTA 210 220 230 240 250 75 EL571585 ************************************************** 69 EL569325 ************************************************** 63 EL577163 .................................................. -15 Ppoly-G-P-4.p12 .................................................. 65 EL568516 ...................................G.............. 64 EL575396 .................................................. 62 EL571592 .................................................. 66 EL575240 .................................................. 18 Ppoly-G-P-4.p11 .................................................. CONSENSUS GTGTAACGGTGGGCCTGTGAAGGACCTCCAAATAGAAGCCACACATGATT 260 270 280 290 300 75 EL571585 ************************************************** 69 EL569325 ************************************************** 63 EL577163 .************************************************* -15 Ppoly-G-P-4.p12 .................................................. 65 EL568516 .************************************************* 64 EL575396 .................................................. 62 EL571592 .................................................. 66 EL575240 .................................................. 18 Ppoly-G-P-4.p11 .................................................. CONSENSUS GGTATTCGGATGCCTTTTGGCCCAATGGTTAAATCATCTTGTCTTCTTTA 310 320 330 340 350 75 EL571585 ***............................................... 69 EL569325 ***............................................... 63 EL577163 ***............................................... -15 Ppoly-G-P-4.p12 .................................................. 65 EL568516 ***............................................... 64 EL575396 .................................................. 62 EL571592 .................................................. 66 EL575240 .................................................. 18 Ppoly-G-P-4.p11 .................................................. 74 EL571859 ......................................... 73 EL576778 .......................... CONSENSUS CAGGTAGACGTCTCGCGCGAGAACAAAGCACCACAAGACCAGCCTCAGTC 360 370 380 390 400 75 EL571585 .................................................. 69 EL569325 .................................................. 63 EL577163 .................................................. -15 Ppoly-G-P-4.p12 .................................................. 65 EL568516 .................................................. 64 EL575396 .................................................. 62 EL571592 .................................................. 66 EL575240 .................................................. 18 Ppoly-G-P-4.p11 .................................................. 74 EL571859 .................................................. 73 EL576778 .........A........................................ 72 EL564198 .............................................. CONSENSUS AACCAAATAGCTTTCTCATTTCTTCATTCATAACCAAAGAAATGAATGAC 410 420 430 440 450 75 EL571585 .................********************************* 69 EL569325 .................********************************* 63 EL577163 .................********************************* -15 Ppoly-G-P-4.p12 .................................................. 65 EL568516 .................********************************* 64 EL575396 .................********************************* 62 EL571592 .................********************************* 66 EL575240 .................********************************* 18 Ppoly-G-P-4.p11 .................................................. 74 EL571859 .................********************************* 73 EL576778 .................********************************* 72 EL564198 .................********************************* CONSENSUS ACATCAAGTGGAGTCAGGTTTGTTCATAGTCTTGACATACTATTTCTTTC 460 470 480 490 500 75 EL571585 ****************.................................. 69 EL569325 ****************.................................. 63 EL577163 ****************.................................. -15 Ppoly-G-P-4.p12 .................................................. 65 EL568516 ****************.................................. 64 EL575396 ****************.................................. 62 EL571592 ****************.................................. 66 EL575240 ****************.................................. 18 Ppoly-G-P-4.p11 .................................................. 74 EL571859 ****************.................................. 73 EL576778 ****************.................................. 72 EL564198 ****************.................................. CONSENSUS GTTAATCTTTTGAAAGTGATGAATCAGCAGCATTTAGAGAAAGTGCTGCG 510 520 530 540 550 75 EL571585 ....................****************************** 69 EL569325 ....................****************************** 63 EL577163 ....................****************************** -15 Ppoly-G-P-4.p12 .................................................. 65 EL568516 ....................****************************** 64 EL575396 ....................****************************** 62 EL571592 ....................****************************** 66 EL575240 ....................****************************** 18 Ppoly-G-P-4.p11 .................................................. 74 EL571859 ....................****************************** 73 EL576778 ....................****************************** 72 EL564198 ....................****************************** CONSENSUS TGGAATATTCATTGGAGAAGATATCCTTTTATTTAATATCCCATATACAA 560 570 580 590 600 75 EL571585 ***************************....................... 69 EL569325 ***************************....................... 63 EL577163 ***************************....................... -15 Ppoly-G-P-4.p12 .................................................. 65 EL568516 ***************************....................... 64 EL575396 ***************************....................... 62 EL571592 ***************************....................... 66 EL575240 ***************************..a..... 18 Ppoly-G-P-4.p11 .................................................. 74 EL571859 ***************************....................... 73 EL576778 ***************************....................... 72 EL564198 ***************************....................... CONSENSUS AAGTAAATTCTTTGATTACTATGGTAAAAATTATATCAAACGCAAGAAAG 610 620 630 640 650 75 EL571585 ......................T........................... 69 EL569325 .................................................. 63 EL577163 .................................................. -15 Ppoly-G-P-4.p12 .................................................. 65 EL568516 .................................................. 64 EL575396 .................................................. 62 EL571592 .................................................. 18 Ppoly-G-P-4.p11 .................................................. 74 EL571859 .................................................. 73 EL576778 .................................................. 72 EL564198 .................................................. CONSENSUS GAAACAGATATCAAGAATCCCGCAACCAATTACTTTTTGGAGGTGGATAT 660 670 680 690 700 75 EL571585 .....................................************* 69 EL569325 .....................................************* 63 EL577163 ...........C.........................************* -15 Ppoly-G-P-4.p12 .................................................. 65 EL568516 .....................................************* 64 EL575396 .....................................************* 62 EL571592 .....................................************* 18 Ppoly-G-P-4.p11 .................................................. 74 EL571859 .....................................************* 73 EL576778 .....................................************* 72 EL564198 .....................................************* CONSENSUS TTGGATTCCCAAATTCAATCTTTGCTTTGAATTTCAGGTATTGGCATATT 710 720 730 740 750 75 EL571585 ************************************************** 69 EL569325 ************************************************** 63 EL577163 ************************************************** -15 Ppoly-G-P-4.p12 .................................................. 65 EL568516 ************************************************** 64 EL575396 ************************************************** 62 EL571592 ************************************************** 18 Ppoly-G-P-4.p11 .................................................. 74 EL571859 ************************************************** 73 EL576778 ************************************************** 72 EL564198 ************************************************** CONSENSUS TCAAAGCTGTTTATCTTATTTCCATGTTCGCGCCCAAATTTTAAATCCTT 760 770 780 790 800 75 EL571585 **************.................................... 69 EL569325 **************.................................... 63 EL577163 **************.................................... -15 Ppoly-G-P-4.p12 ......... 65 EL568516 **************.................................... 64 EL575396 **************.................................... 62 EL571592 **************.................................... 18 Ppoly-G-P-4.p11 .................................................a 74 EL571859 **************.................................... 73 EL576778 **************.................................... 72 EL564198 **************.................................... CONSENSUS ATTTGATTTACTAGGATCCATATCATTATGTATCCACTTGGGACTCGCAA 810 820 830 840 850 75 EL571585 .........N........................................ 69 EL569325 .................................................. 63 EL577163 .......................TT.....T.........CA 65 EL568516 .................................................. 64 EL575396 .........N........................................ 62 EL571592 .................................................. 18 Ppoly-G-P-4.p11 . 74 EL571859 .................................................. 73 EL576778 .................................................. 72 EL564198 .................................................. CONSENSUS CATTCCGTAAAGGAGTCGCACAAAGCTGATAATTTAAAACACGAGTTGTT 860 870 880 890 900 75 EL571585 .................................................. 69 EL569325 .................................................. 65 EL568516 .................................................. 64 EL575396 .................................................. 62 EL571592 .................................................. 74 EL571859 .................................................. 73 EL576778 .................................................. 72 EL564198 .................................................. CONSENSUS GTGCCAGCGAGGCGAGACGCTCATTGTTGTCCCTTGTTGGTGGTTAAATG 910 920 930 940 950 75 EL571585 .................................................. 69 EL569325 ...........................N...................... 65 EL568516 .................................................. 64 EL575396 .................................................. 62 EL571592 .................................................. 74 EL571859 .................................................. 73 EL576778 ......C........................................... 72 EL564198 .................................................. CONSENSUS ATCCAGTTAGTCTTATCAGAAGCATTAAATTTCAGAGACCGGACTTGAAT 960 970 980 990 1000 75 EL571585 ........................G............C.A 69 EL569325 .................................................. 65 EL568516 .................................................. 64 EL575396 ...........................................c...... 62 EL571592 ..........................*......... 74 EL571859 .................................................. 73 EL576778 ...G.............................................. 72 EL564198 .................................................. CONSENSUS TTATATGTCCCAAAAAGCAGCTTGCCAATTCCGCTCAACCAACCATGGGA 1010 1020 1030 1040 1050 69 EL569325 .................................................. 65 EL568516 .................................................. 64 EL575396 .....t.....................a...................... 74 EL571859 ...........................................N...... 73 EL576778 .................................................. 72 EL564198 .................................................. CONSENSUS TTTTTTTAAAGAGCTAGCACTTTCCGCAACCATACCTATGGTAGGAGAGC 1060 1070 1080 1090 1100 69 EL569325 ................. 65 EL568516 ...............................*.................. 64 EL575396 . 74 EL571859 ........................... 73 EL576778 .................................................. 72 EL564198 .................................................. CONSENSUS TTATGTTAGCTTCTTTCGTGAAAAGCCAAAAATTCGAATTATCTGCGAGC 1110 1120 1130 1140 1150 65 EL568516 ...... 73 EL576778 .................................................. 72 EL564198 .................................................. CONSENSUS AGCACATGGTGGATAGGAGAAAAATACGACGGGGTGAGATTTTGCTGGAA 1160 1170 1180 1190 1200 73 EL576778 ............................................A..... 72 EL564198 .................................................. CONSENSUS CGCAAAAACATACCGATTATATTCTAGGAATGGGCTTAAACTGCGCGTGC 1210 1220 1230 1240 1250 73 EL576778 .................................................. 72 EL564198 .................................................. CONSENSUS CACGTCAGTTTTTGCGTATGCTTGCACCTGGGTCTTCTTTTCTCGATGGA 1260 1270 1280 1290 1300 73 EL576778 A.A.................... 72 EL564198 .................................................. CONSENSUS GAGGTCTGGTTCGGGCGAGGGCAGTTTTCGGAAGTTCAGCAATTAGTCAT 1310 1320 1330 1340 1350 72 EL564198 ............................................N..... CONSENSUS TGCTAACGTACATCCATCCATTTCTACACCATGGCCCCTTATAA-GATGG 1360 1370 1380 1390 1400 72 EL564198 .................N................................ CONSENSUS TAGTGTTTGATGATCCC-GGACGCTGACTCAGCACCTACCATTCGAGAAA 1410 1420 1 72 EL564198 ........................... CONSENSUS CGATACGCCAGTGTTCTCGATGCCGTC