Short description of the content in additional_file_2.txt: ---------------------------------------------------------- The entries in this file are enzymatic reactions from EcoCyc's reactions.dat file which were associated with complete EC numbers and did not have links to the enzyme objects in EcoCyc's enzrxns.dat file. These reactions were added to our study using information from KEGG and BRENDA. Description of the fields: REACTION-ID - CYTOSOL-AMINOPEPTIDASE-RXN ##EcoCyc reaction id EC-NUMBER - 3.4.11.1 ##EC number LEFT - WATER ##reactant left side LEFT - AMINOACYL-PEPTIDE ##reactant left side RIGHT - AMINO ACID ##reactant right side RIGHT - PEPTIDE ##reactant right side COMMON-NAME - Cytosol aminopeptidase ##enzyme common name GENE - b4260(pepA) ##Blattner id for gene KEGG - cofactor Zinc, b4260(pepA) ##note about reaction differences BRENDA - ##from KEGG or BRENDA DIRECTION - REVERSIBLE (default) ##direction of reaction. If no /// ##information was available we ##assumed that the reaction is ##reversible ---------------------------------------------------------------------- REACTION-ID - CYTOSOL-AMINOPEPTIDASE-RXN EC-NUMBER - 3.4.11.1 LEFT - WATER LEFT - AMINOACYL-PEPTIDE RIGHT - AMINO ACID RIGHT - PEPTIDE COMMON-NAME - Cytosol aminopeptidase GENE - b4260(pepA) KEGG - cofactor Zinc, b4260(pepA) BRENDA - DIRECTION - REVERSIBLE (default) /// REACTION-ID - 3.1.3.16-RXN EC-NUMBER - 3.1.3.16 LEFT - A PHOSPHOPROTEIN LEFT - WATER RIGHT - Pi RIGHT - A PROTEIN COMMON-NAME - Phosphoprotein phosphatase GENE - b1838(ppha) b2734(pphb) KEGG - cofactor calcium calmodin, b1838(ppha) b2734(pphb) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - 2.7.7.8-RXN EC-NUMBER - 2.7.7.8 LEFT - Pi LEFT - RNA(N+1) RIGHT - RNA(N) RIGHT - A NUCLEOSIDE DIPHOSPHATE COMMON-NAME - Polynucleotide phosphorylase GENE - b3164(pnp) KEGG - b3164(pnp) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - PROTEIN-TYROSINE-PHOSPHATASE-RXN EC-NUMBER - 3.1.3.48 LEFT - WATER LEFT - PROTEIN TYROSINE PHOSPHATE RIGHT - Pi RIGHT - PROTEIN TYROSINE COMMON-NAME - Protein-tyrosine-phosphatase GENE - b0982(yccY) b2061(wzb) KEGG - b0982(yccY) b2061(wzb) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN EC-NUMBER - 4.1.99.3 LEFT - CYCLOBUTADIPYRIMIDINE (IN DNA) RIGHT - PYRIMIDINE RESIDUES (IN DNA) COMMON-NAME - Deoxyribodipyrimidine photo-lyase GENE - b0708(phrB) KEGG - cofactor FAD, b0708(phrB) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - PHOSPHORYL-RXN EC-NUMBER - 2.4.1.1 LEFT - Pi LEFT - amylose(n) RIGHT - GLC-1-P RIGHT - amylose(n-1) COMMON-NAME - Polyphosphorylase GENE - b3417(malP) b3428(glgP) KEGG - cofactor Pyridoxal phosphate, b3417(malP) b3428(glgP) BRENDA - DIRECTION - REVERSIBLE (EcoCyc) /// REACTION-ID - TRNA-NUCLEOTIDYLTRANSFERASE-RXN EC-NUMBER - 2.7.7.56 LEFT - Pi LEFT - TRNA(N+1) RIGHT - TRNA(N) RIGHT - A NUCLEOSIDE DIPHOSPHATE COMMON-NAME - tRNA nucleotidyltransferase GENE - b3643(rph) KEGG - b3643(rph) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - DNA-LIGASE-(NAD(+))-RXN EC-NUMBER - 6.5.1.2 LEFT - NAD LEFT - (DEOXYRIBONUCLEOTIDE)(N) LEFT - (DEOXYRIBONUCLEOTIDE)(M) RIGHT - (DEOXYRIBONUCLEOTIDE)(N+M) RIGHT - NICOTINAMIDE_NUCLEOTIDE RIGHT - AMP COMMON-NAME - DNA ligase (NAD+) GENE - b2411(lig) KEGG - b2411(lig) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - 4.1.99.4-RXN EC-NUMBER - 4.1.99.4 LEFT - WATER LEFT - CPD-68 RIGHT - AMMONIA RIGHT - 2-OXOBUTANOATE COMMON-NAME - 1-Aminocyclopropane-1-carboxylate deaminase GENE - b1919(yedO) KEGG - cofactor Pyridoxal phosphate, b1919(yedO) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - DNA-DIRECTED-DNA-POLYMERASE-RXN EC-NUMBER - 2.7.7.7 LEFT - DEOXYNUCLEOSIDE TRIPHOSPHATE RIGHT - PPI RIGHT - DNA(N) COMMON-NAME - DNA-directed DNA polymerase GENE - b0060(polB) b0184(dnaE) b0215(dnaQ) b0470(dnaX) b0640(holA) GENE - b1099(holB) b1842(holE) b3701(dnaN) b3863(polA) b4259(holC) GENE - b4372(holD) KEGG - b0060(polB) b0184(dnaE) b0215(dnaQ) b0470(dnaX) b0640(holA) KEGG - b1099(holB) b1842(holE) b3701(dnaN) b3863(polA) b4259(holC) KEGG - b4372(holD) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - 2.1.1.73-RXN EC-NUMBER - 2.1.1.73 LEFT - DNA CYTOSINE LEFT - S-ADENOSYLMETHIONINE RIGHT - ADENOSYL-HOMO-CYS RIGHT - DNA 5-METHYLCYTOSINE COMMON-NAME - Site-specific DNA-methyltransferase (cytosine-specific ) GENE - b1961(dcm) KEGG - b1961(dcm) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - DNA-DIRECTED-RNA-POLYMERASE-RXN EC-NUMBER - 2.7.7.6 LEFT - NUCLEOSIDE TRIPHOSPHATE RIGHT - RNA(N) RIGHT - PPI COMMON-NAME - DNA-directed RNA polymerase GENE - b3295(rpoA) b3649(rpoZ) b3987(rpoB) b3988(rpoC) KEGG - b3295(rpoA) b3649(rpoZ) b3987(rpoB) b3988(rpoC) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - BETA-PHOSPHOGLUCOMUTASE-RXN EC-NUMBER - 5.4.2.6 LEFT - CPD-448 RIGHT - CPD-222 COMMON-NAME - beta-Phosphoglucomutase GENE - b1317(ycjU) KEGG - b1317(ycjU) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - PROTEIN-GLUTAMATE-METHYLESTERASE-RXN EC-NUMBER - 3.1.1.61 LEFT - WATER LEFT - protein-L-glutamate-O4-methyl-ester RIGHT - METOH RIGHT - protein-L-glutamate COMMON-NAME - Protein-glutamate methylesterase GENE - b1883(cheB) KEGG - b1883(cheB) BRENDA - DIRECTION - IRREVERSIBLE /// REACTION-ID - RNA-3'-PHOSPHATE-CYCLASE-RXN EC-NUMBER - 6.5.1.4 LEFT - RNA 3'-TERMINAL-PHOSPHATE LEFT - ATP RIGHT - PPI RIGHT - AMP RIGHT - RNA TERMINAL-2',3'-CYCLIC-PHOSPHATE COMMON-NAME - RNA-3'-phosphate cyclase GENE - b3419(yhgJ) b3420(yhgK) KEGG - b3419(yhgJ) b3420(yhgK) ##note SP - the same ID BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - 2.1.1.63-RXN EC-NUMBER - 2.1.1.63 LEFT - DNA (CONTAINING 6-O-METHYLGUANINE) LEFT - PROTEIN L-CYSTEINE RIGHT - PROTEIN S-METHYL-L-CYSTEINE RIGHT - DNA (WITHOUT 6-O-METHYLGUANINE) COMMON-NAME - Methylated-DNA--protein-cysteine S-methyltransferase GENE - b1335(ogt) b2213(ADA) KEGG - b1335(ogt) b2213(ADA) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - 2-METHYLCITRATE-DEHYDRATASE-RXN EC-NUMBER - 4.2.1.79 LEFT - CPD-622 RIGHT - CPD-1136 RIGHT - WATER COMMON-NAME - 2-Methylcitrate dehydratase GENE - b0334(prpD) KEGG - b0334(prpD) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - 3.4.16.4-RXN EC-NUMBER - 3.4.16.4 LEFT - D-ALA-D-ALA LEFT - WATER RIGHT - D-ALANINE COMMON-NAME - D-Alanyl-D-alanine carboxypeptidase GENE - b0632(dacA) b0839(dacC) b2010(dacD) KEGG - b0632(dacA) b0839(dacC) b2010(dacD) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - 3.6.1.41-RXN EC-NUMBER - 3.6.1.41 LEFT - ADENOSYL-P4 LEFT - WATER RIGHT - ADP COMMON-NAME - Dinucleosidetetraphosphate (symmetrical) GENE - b0049(apaH) KEGG - b0049(apaH) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - 1.17.4.2-RXN EC-NUMBER - 1.17.4.2 LEFT - 2'-DEOXYRIBONUCLEOSIDE TRIPHOSPHATE LEFT - Ox-Thioredoxin LEFT - WATER RIGHT - RIBONUCLEOSIDE TRIPHOSPHATE RIGHT - Red-Thioredoxin COMMON-NAME - Ribonucleotide reductase GENE - b4238(nrdD) KEGG - cofactors Cobamide coenzyme Iron ATP, b4238(nrdD) BRENDA - DIRECTION - REVERSIBLE (EcoCyc) /// REACTION-ID - NADH-DEHYDROGENASE-RXN EC-NUMBER - 1.6.99.3 LEFT - Acceptor LEFT - NADH RIGHT - Donor-H2 RIGHT - NAD COMMON-NAME - NADH dehydrogenase GENE - b1109(ndh) KEGG - cofactors FAD Iron Sulfur, b1109(ndh) BRENDA - DIRECTION - REVERSIBLE (EcoCyc) /// REACTION-ID - PROPIONATE--COA-LIGASE-RXN EC-NUMBER - 6.2.1.17 LEFT - PROPIONATE LEFT - ATP LEFT - CO-A RIGHT - PPI RIGHT - AMP RIGHT - PROPIONYL-COA COMMON-NAME - Propionate--CoA ligase GENE - b0335(prpE) KEGG - b0335(prpE) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - TRNA-ISOPENTENYLTRANSFERASE-RXN EC-NUMBER - 2.5.1.8 LEFT - delta(3)-isopentenyl-pp LEFT - TRNA RIGHT - PPI RIGHT - TRNA CONTAINING 6-ISOPENTENYLADENOSINE COMMON-NAME - tRNA isopentenyltransferase GENE - b4171(miaA) KEGG - b4171(miaA) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - 2.7.3.9-RXN EC-NUMBER - 2.7.3.9 LEFT - PROTEIN HISTIDINE LEFT - PHOSPHO-ENOL-PYRUVATE RIGHT - PROTEIN N-PHOSPHOHISTIDINE RIGHT - PYRUVATE COMMON-NAME - Phosphoenolpyruvate--protein phosphotransferase GENE - b2383 b2416(ptsI) b2829(ptsP) b3947(ptsA) KEGG - b2383 b2416(ptsI) b2829(ptsP) b3947(ptsA) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - AMINOCYL-TRNA-HYDROLASE-RXN EC-NUMBER - 3.1.1.29 LEFT - WATER LEFT - N-SUBSTITUTED AMINOACYL-TRNA RIGHT - N-SUBSTITUTED AMINO ACID RIGHT - TRNA COMMON-NAME - Aminoacyl-tRNA hydrolase GENE - b1204(PTH) KEGG - b1204(PTH) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - SUCROSE-PHOSPHORYLASE-RXN EC-NUMBER - 2.4.1.7 LEFT - Pi LEFT - SUCROSE RIGHT - FRU RIGHT - GLC-1-P COMMON-NAME - Sucrose phosphorylase GENE - b1309(ycjM) KEGG - b1309(ycjM) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - 2.3.1.128-RXN EC-NUMBER - 2.3.1.128 LEFT - ACETYL-COA LEFT - RIBOSOMAL-PROTEIN L-ALANINE RIGHT - RIBOSOMAL-PROTEIN N-ACETYL-L-ALANINE RIGHT - CO-A COMMON-NAME - Ribosomal-protein-alanine N-acetyltransferase GENE - b1066(rimJ) b4373(rimI) KEGG - b1066(rimJ) b4373(rimI) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - PHOSNACMURPENTATRANSLYS-RXN EC-NUMBER - 2.7.8.13 LEFT - UNDECAPRENYL-P LEFT - C3 RIGHT - C4 RIGHT - UMP COMMON-NAME - Phospho-N-acetylmuramoyl-pentapeptide-transferase GENE - b0087(mraY) KEGG - b0087(mraY) BRENDA - DIRECTION - REVERSIBLE (EcoCyc) /// REACTION-ID - 2.7.1.69-RXN EC-NUMBER - 2.7.1.69 LEFT - SUGAR LEFT - PROTEIN N-PHOSPHOHISTIDINE RIGHT - SUGAR PHOSPHATE RIGHT - PROTEIN HISTIDINE COMMON-NAME - Protein-N(pai)-phosphohistidine--sugar phosphotransferase GENE - b0129(yadI) b0679(nagE) b0731(hrsA) b1101(ptsG) b1621(malX) GENE - b1736(celC) b1738(celA) b1817(manX) b2093(gatB) b2094(gatA) GENE - b2167(fruA) b2169(fruB) b2387 b2417(crr) b2429 b2702(srlA_1) GENE - b2703(srlA) b2704(srlB) b2715(ascF) b2933(cmtA) b2934(cmtB) GENE - b3133(agaV) b3138(agaB) b3204(ptsN) b3599(mtlA) b3682(glvB) GENE - b3722(bglF) b3899(frvB) b3900(frvA) b3950(frwB) b3953(frwD) GENE - b4194(sgaB) b4195(sgaA) b4240(treB) b4302(sgcA) KEGG - b0129(yadI) b0679(nagE) b0731(hrsA) b1101(ptsG) b1621(malX) KEGG - b1736(celC) b1738(celA) b1817(manX) b2093(gatB) b2094(gatA) KEGG - b2167(fruA) b2169(fruB) b2387 b2417(crr) b2429 b2702(srlA_1) KEGG - b2703(srlA) b2704(srlB) b2715(ascF) b2933(cmtA) b2934(cmtB) KEGG - b3133(agaV) b3138(agaB) b3204(ptsN) b3599(mtlA) b3682(glvB) KEGG - b3722(bglF) b3899(frvB) b3900(frvA) b3950(frwB) b3953(frwD) KEGG - b4194(sgaB) b4195(sgaA) b4240(treB) b4302(sgcA) BRENDA - DIRECTION - REVERSIBLE (EcoCyc) /// REACTION-ID - 6-PHOSPHO-BETA-GLUCOSIDASE-RXN EC-NUMBER - 3.2.1.86 LEFT - 6P-GLUCOSIDE-GLUCOSE LEFT - WATER RIGHT - GLC RIGHT - GLC-6-P COMMON-NAME - 6-Phospho-beta-glucosidase GENE - b1734(celF) b2716(ascB) b2901(bglA) b3681(glvG) b3721(bglB) KEGG - b1734(celF) b2716(ascB) b2901(bglA) b3681(glvG) b3721(bglB) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - GAMMA-GLUTAMYLTRANSFERASE-RXN EC-NUMBER - 2.3.2.2 LEFT - AN AMINO ACID LEFT - (5-L-GLUTAMYL)-PEPTIDE RIGHT - 5-L-GLUTAMYL-AMINO ACID RIGHT - PEPTIDE COMMON-NAME - Glutamyl transpeptidase GENE - b3447(ggt) KEGG - b3447(ggt) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN EC-NUMBER - 2.7.7.19 LEFT - ATP LEFT - (NUCLEOTIDE)(M) RIGHT - (NUCLEOTIDE)(M+N) RIGHT - PPI COMMON-NAME - Polynucleotide adenylyltransferase GENE - b0143(pcnB) KEGG - b0143(pcnB) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - METHIONYL-TRNA-FORMYLTRANSFERASE-RXN EC-NUMBER - 2.1.2.9 LEFT - Charged-MET-tRNAs LEFT - 10-FORMYL-THF LEFT - WATER RIGHT - THF RIGHT - fMET-tRNAs COMMON-NAME - Methionyl-tRNA formyltransferase GENE - b3288(fmt) KEGG - b3288(fmt) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - 2.1.1.77-RXN EC-NUMBER - 2.1.1.77 LEFT - PROTEIN L-BETA-ASPARTATE LEFT - S-ADENOSYLMETHIONINE RIGHT - PROTEIN L-BETA-ASPARTATE METHYL ESTER RIGHT - ADENOSYL-HOMO-CYS COMMON-NAME - Protein-beta-aspartate methyltransferase GENE - b2743(pcm) KEGG - b2743(pcm) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN EC-NUMBER - 2.4.2.29 LEFT - QUEUOSINE LEFT - TRNA GUANINE RIGHT - TRNA QUEUOSINE RIGHT - GUANINE COMMON-NAME - tRNA-guanine transglycosylase GENE - b0406(tgt) KEGG - b0406(tgt) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - 1.2.1.1-RXN EC-NUMBER - 1.2.1.1 LEFT - GLUTATHIONE LEFT - NAD LEFT - FORMALDEHYDE RIGHT - NADH RIGHT - CPD-548 COMMON-NAME - Formaldehyde dehydrogenase (glutathione) GENE - b0356(adhC) KEGG - b0356(adhC) BRENDA - DIRECTION - REVERSIBLE (EcoCyc) /// REACTION-ID - PEPTIDYLPROLYL-ISOMERASE-RXN EC-NUMBER - 5.2.1.8 LEFT - PEPTIDYLPROLINE (OMEGA=180) RIGHT - PEPTIDYLPROLINE (OMEGA=0) COMMON-NAME - Peptidylprolyl isomerase GENE - b0028(slpA) b0053(surA) b0441(ppiD) b0525(ppiB) b3347(fkpA) GENE - b3349(slyD) b3363(ppiA) b3775(ppiC) b4207(fklB) KEGG - b0028(slpA) b0053(surA) b0441(ppiD) b0525(ppiB) b3347(fkpA) KEGG - b3349(slyD) b3363(ppiA) b3775(ppiC) b4207(fklB) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - TARTRATE-DEHYDROGENASE-RXN EC-NUMBER - 1.1.1.93 LEFT - NAD LEFT - TARTRATE RIGHT - NADH RIGHT - CPD-66 COMMON-NAME - Tartrate dehydrogenase GENE - b1800(yeaU) KEGG - cofactor Mn2+, b1800(yeaU) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - PHOSPHOLIPASE-A1-RXN EC-NUMBER - 3.1.1.32 LEFT - PHOSPHATIDYLCHOLINE-CMPD LEFT - WATER RIGHT - 2-ACYLGLYCEROPHOSPHOCHOLINE RIGHT - a fatty acid COMMON-NAME - Phospholipase A1 GENE - b3821(pldA) KEGG - cofactor Calcium, b3821(pldA) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - TRNA-(URACIL-5-)-METHYLTRANSFERASE-RXN EC-NUMBER - 2.1.1.35 LEFT - TRNA LEFT - S-ADENOSYLMETHIONINE RIGHT - ADENOSYL-HOMO-CYS RIGHT - TRNA CONTAINING THYMINE COMMON-NAME - tRNA (uracil-5-)-methyltransferase GENE - b3965(trmA) KEGG - b3965(trmA) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - L-ASPARTATE-OXIDASE-RXN EC-NUMBER - 1.4.3.16 LEFT - OXYGEN-MOLECULE LEFT - L-ASPARTATE LEFT - WATER RIGHT - HYDROGEN-PEROXIDE RIGHT - AMMONIA RIGHT - OXALACETIC_ACID COMMON-NAME - L-Aspartate oxidase GENE - b2574(nadB) KEGG - cofactor FAD, b2574(nadB) BRENDA - DIRECTION - REVERSIBLE (EcoCyc) /// REACTION-ID - 2.1.1.72-RXN EC-NUMBER - 2.1.1.72 LEFT - S-ADENOSYLMETHIONINE LEFT - DNA ADENINE RIGHT - ADENOSYL-HOMO-CYS RIGHT - DNA 6-METHYLAMINOPURINE COMMON-NAME - Site-specific DNA-methyltransferase (adenine-specific) GENE - b2330(yfcB) b3262(yhdJ) b3387(dam) b4349(hsdM) KEGG - b2330(yfcB) b3262(yhdJ) b3387(dam) b4349(hsdM) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - TRNA-ADENYLYLTRANSFERASE-RXN EC-NUMBER - 2.7.7.25 LEFT - TRNA(N) LEFT - ATP RIGHT - PPI RIGHT - TRNA(N+1) COMMON-NAME - tRNA adenylyltransferase GENE - b3056(cca) KEGG - b3056(cca) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - TRNA-(GUANINE-N1-)-METHYLTRANSFERASE-RXN EC-NUMBER - 2.1.1.31 LEFT - TRNA LEFT - S-ADENOSYLMETHIONINE RIGHT - TRNA CONTAINING N1-METHYLGUANINE RIGHT - ADENOSYL-HOMO-CYS COMMON-NAME - tRNA (guanine-N1-)-methyltransferase GENE - b2607(trmD) KEGG - b2607(trmD) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - BETA-LACTAMASE-RXN EC-NUMBER - 3.5.2.6 LEFT - A BETA-LACTAM LEFT - WATER RIGHT - A SUBSTITUTED BETA-AMINO ACID COMMON-NAME - beta-Lactamase GENE - b4150(ampC) KEGG - b4150(ampC) BRENDA - DIRECTION - REVERSIBLE /// REACTION-ID - PSEUDOURIDYLATE-SYNTHASE-RXN EC-NUMBER - 4.2.1.70 LEFT - RIBOSE-5P LEFT - URACIL RIGHT - PSEUDOURIDINE-5-P RIGHT - WATER COMMON-NAME - Pseudouridylate synthase GENE - b0058(rluA) b1086(rluC) b2183(rsuA) b2318(truA) b2594(rluD) GENE - b3166(truB) KEGG - b0058(rluA) b1086(rluC) b2183(rsuA) b2318(truA) b2594(rluD) KEGG - b3166(truB) BRENDA - DIRECTION - REVERSIBLE ///