TRAIL and Taurolidine induce apoptosis and decrease proliferation in human fibrosarcoma

1756-9966-27-82 1756-9966 Research TRAIL and Taurolidine induce apoptosis and decrease proliferation in human fibrosarcoma Daigeler Adrien adrien.daigeler@rub.de Brenzel Christina christina.brenzel@rub.de Bulut Daniel daniel.bulut@rub.de Geisler Anne annergy@web.de Hilgert Christoph christoph.hilgert@rub.de Lehnhardt Marcus marcus.lehnhardt@rub.de Steinau U Hans hans-ulrich.steinau@bergmannsheil.de Flier Annegret lars.steinstraesser@rub.de Steinstraesser Lars annegret.flier@rub.de Klein-Hitpass Ludger ludger.klein-hitpass@uni-essen.de Mittelkötter Ulrich u.mittelkoetter@katharinen-hospital.de Uhl Waldemar waldemar.uhl@rub.de Chromik M Ansgar chromik@t-online.de

Department of Plastic Surgery, Burn Center, Hand Center, Sarcoma Reference Center, BG-University Hospital Bergmannsheil, Bürkle-de-la-Camp-Platz 1, 44789 Bochum, Germany

Department of General and Visceral Surgery, St. Josef Hospital, Ruhr-University, Gudrunstraße 56, 44791 Bochum, Germany

Department of Medicine II, St. Josef Hospital, Ruhr-University, Gudrunstraße 56, 44791 Bochum, Germany

Institute for Cell Biology (Tumor Research), University of Duisburg-Essen, Virchowstraße 173 45122 Essen, Germany

Journal of Experimental & Clinical Cancer Research 1756-9966 2008 27 1 82 http://www.jeccr.com/content/27/1/82 19077262 10.1186/1756-9966-27-82 27 10 2008 12 12 2008 12 12 2008 2008 Daigeler et al; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Abstract

Background

Disseminated soft tissue sarcoma still represents a therapeutic dilemma because effective cytostatics are missing. Therefore we tested TRAIL and Tarolidine (TRD), two substances with apoptogenic properties on human fibrosarcoma (HT1080).

Methods

Viability, apoptosis and necrosis were visualized by TUNEL-Assay and quantitated by FACS analysis (Propidiumiodide/AnnexinV staining). Gene expression was analysed by RNA-Microarray and the results validated for selected genes by rtPCR. Protein level changes were documented by Western Blot analysis. NFKB activity was analysed by ELISA and proliferation assays (BrdU) were performed.

Results and discussion

The single substances TRAIL and TRD induced apoptotic cell death and decreased proliferation in HT1080 cells significantly. Gene expression of several genes related to apoptotic pathways (TRAIL: ARHGDIA, NFKBIA, TNFAIP3; TRD: HSPA1A/B, NFKBIA, GADD45A, SGK, JUN, MAP3K14) was changed. The combination of TRD and TRAIL significantly increased apoptotic cell death compared to the single substances and lead to expression changes in a variety of genes (HSPA1A/B, NFKBIA, PPP1R15A, GADD45A, AXL, SGK, DUSP1, JUN, IRF1, MYC, BAG5, BIRC3). NFKB activity assay revealed an antipodal regulation of the several subunits of NFKB by TRD and TRD+TRAIL compared to TRAIL alone.

Conclusion

TRD and TRAIL are effective to induce apoptosis and decrease proliferation in human fibrosarcoma. A variety of genes seems to be involved, pointing to the NFKB pathway as key regulator in TRD/TRAIL-mediated apoptosis.

Background

Fibrosarcoma is a rare entity within the heterogeneous group of soft tissue sarcomas. It accounts for approximately 2.6% of soft tissue sarcomas which themselves have an incidence of about 2–4/100000 1. Surgical resection is the key factor in primary treatment and radiation can improve local control, but once the disease has spread, the remaining treatment options are very limited. Response rates to established chemotherapeutic agents like doxorubicin and ifosfamide (with up to 30% at best) are still disappointing 2. Therefore, new agents are being sought to broaden the therapeutic armament.

TRAIL (tumor necrosis factor receptor apoptosis inducing ligand) has previously been associated with apoptosis in a variety of malignant cells 3 and in HT1080 as well 4. Whereas FasL (Fas Ligand) and TNF caused significant side effects by unselective apoptogenic effects on normal cells 5, TRAIL proved to be much less toxic and at least equally effective.

Many substances, including established chemotherapeutics like 5-Fluorouracil, cisplatin, doxorubicin, etoposide and others, like vitamime E succinate and alpha-Tocopheryl succinate have been shown to sensitize tumor cells to TRAIL-induced apoptosis 6789. Recent studies revealed apoptotic effects of another substance, Taurolidine, that was originally used as an antiinfective in peritonitis. Taurolidine exerted apoptotic activity on a variety of malignant cells in vitro and in vivo 101112. First reports of successful treatments of glioblastoma and advanced gastric cancer without systemic side effects in humans are promising 1314. Taurolidine has previously been shown to enhance Fas-Ligand mediated cell death 15 and a xenograft study using recombinant TNF in the treatment of mouse fibrosarcoma revealed that Taurolidine reduced the toxicity of TNF without decreasing the anti-tumor efficacy of TNF 16. The detailed mechanism of action is still unclear, but inhibition of Bcl-2 and an increased efflux of cytochrome-c, an activation of the caspases, and an increased PARP (poly (ADP-ribose) polymerase) cleavage seem to be involved 101718. By comparison, other authors found Fas-ligand dependent mechanisms or an inhibition of tumor angiogenesis to be responsible for the inhibition of tumor growth 1519.

In contrast to established chemotherapeutics, the absence of toxicity makes Taurolidine candidate for co-treatment with TRAIL. Inspired by previous studies that showed synergistic effects of TRAIL in combination with Taurolidine inducing apoptotic cell death in human colon and esophageal carcinoma cells 2021, we examined the effects of these two substances on human fibrosarcoma.

Methods

Cell line

Human fibrosarcoma cells, HT1080, were purchased from ATCC (Cell line CCI 121, Wesel, Germany) and maintained with modified Eagle's medium (MEM) and NEAA (non-essential amino acids) + 10% FBS supplemented with 1% penicillin (100 U/ml) and streptomycin (100 μg/ml), 1% Sodium Pyruvate and 1% L-Glutamine. Cells were cultured in a humidified atmosphere with 5% CO₂at 37°C in 25 cm²flasks.

Reagents

Taurolidine (TRD) (Taurolin^®2%, Boehringer Ingelheim, Germany) containing 5% Povidon was used as supplied by the manufacturer. A 5% Povidon solution (K16 Povidon, generously provided by Geistlich Pharma AG, Wolhusen, Switzerland) in equal volume served as control for the TRD group. Recombinant human TRAIL/Apo2L (Bender MedSystems, Vienna, Austria) was dissolved in distilled water according to the manufacturer's instructions. Distilled water in equal volume served as control in the TRAIL experiments.

Dose-finding study

Cells were incubated with TRD (50, 100, 250, 500 μmol/l) or recombinant human TRAIL (10, 50, 100, 500 ng/ml) and the respective controls (Povidon/H₂O) for 2, 6, 12, 24 h to identify effective single concentrations and the time dependency of the effects. All experiments were repeated with 3 consecutive passages.

The lowest effective single concentration TRAIL 50 ng/ml that induced apoptosis but no significant necrosis and TRD 250 μmol/l, that showed the highest apoptotic rates and was most effective reducing viable cells were then used as single substances and in combination to identify a possibly synergistic effect. As time points 2, 6, 12, and 24 h were chosen. All experiments were repeated with 3 consecutive passages. Cells for gene expression were harvested after 2 h.

Flow cytometry analysis

At the indicated incubation time, floating cells were collected together with the supernatant and adherent cells which were harvested by trypsinization. Cells were sedimented by centrifugation, resuspended in 195 μl binding buffer (Bender MedSystems, Vienna, Austria) and incubated with 5 μl Annexin V-FITC (BD Biosciences, Heidelberg, Germany) and 10 μl Propidiumiodide (PI) (Bender MedSystems, Vienna, Austria) following the manufacturer's manual. Cells were analyzed immediately using a FACS flow cytometer (FACS Calibur BD Biosciences, Heidelberg, Germany). For each measurement, 20.000 cells were counted. Dot plots and histograms were analyzed by CellQuest Pro software (BD Biosciences, Heidelberg, Germany). Annexin V positive cells were considered apoptotic; Annexin V and PI positive cells were identified as necrotic. Annexin V and PI negative cells were termed viable.

Cell morphology

Morphology of adherent cells and cells suspended in culture medium was studied and documented using a phase contrast microscope, Zeiss Axiovert 25 (Karl Zeiss, Jena, Germany).

TUNEL-assay

Apoptosis was evaluated by terminal deoxynucleotidyl transferase-mediated dUTP-nick end-labeling (TUNEL) using the In Situ Cell Death Detection Kit, Fluorescein (Roche Applied Science, Mannheim, Germany) according to the manufacturer's instructions and analyzed by fluorescence microscopy (Leica DM4000B, Leica Microsystems, Nussloch, Germany).

Annexin-PI staining for fluorescence microscopy

Cells were incubated and prepared as for the TUNEL assay but stained with 5 μl Annexin V-FITC and 10 μl PI. Photos were taken immediately after staining using fluorescence microscopy (Leica DM4000B, Leica Microsystems, Nussloch, Germany).

Proliferation-assay

To determine and quantitate the effects of the different substances on cell proliferation, a colorimetric cell proliferation BrdU (5-bromo-2'-deoxyuridine)-ELISA (Roche Applied Science, Mannheim, Germany) was used according to the manufacturer's instructions. Based on the incorporation of the thymidine analogue BrdU during DNA-synthesis, the amount of newly synthesized DNA and thus of proliferation cells is detected using a microplate absorbance reader Sunrise™ (Tecan trading AG, Switzerland) after applying anti-BrdU conjugated with peroxidase (POD) and enhancing a specific substrate reaction. For this experiment, cells were incubated with the different substances for 8 h.

Statistical analysis

Results of FACS-analysis for percentages of viable, apoptotic and necrotic cells are expressed as means ± SD of at least three independent experiments with consecutive passages. In this study, comparisons between experimental groups (single agent application in different doses and single agents versus combined treatment at various time points) were performed using one way measures of variance (one way ANOVA) over all time points (Tukey). P-values ≤ 0.05 were considered as statistically significant and indicated in the figures as follows: *** p ≤ 0.001, ** p ≤ 0.005, * p ≤ 0.05. The indications in figures 1, 2, 3 refer to TRD 250 μmol/l, TRAIL 50 ng/ml, and TRD250 μmol/l+TRAIL50 ng/ml compared to the control.

Figure 1

Effects of TRAIL on viability, apoptosis and necrosis in HT1080 cells measured by FACS-analysis: Cells were incubated with TRAIL in the concentrations indicated and with H₂O (control) for 24 h

Effects of TRAIL on viability, apoptosis and necrosis in HT1080 cells measured by FACS-analysis: Cells were incubated with TRAIL in the concentrations indicated and with H₂O (control) for 24 h. The percentages of viable, apoptotic and necrotic cells were determined by FACS-analysis for Annexin V-FITC and Propidiumiodide. Values are means ± SD of 3 independent experiments with consecutive passage (*** p ≤ 0.001, ** p ≤ 0.005; one way ANOVA). The indicators of significance refer to the difference between the 50 ng/ml and the control series. The scales of the y-axis were adjusted to the different values for clarity and therefore vary.

Figure 2

Effects of TRD on viability, apoptosis and necrosis in HT1080 cells measured by FACS-analysis: Cells were incubated with TRD in the concentrations indicated and with Povidon 5% (control) for 24 h

Effects of TRD on viability, apoptosis and necrosis in HT1080 cells measured by FACS-analysis: Cells were incubated with TRD in the concentrations indicated and with Povidon 5% (control) for 24 h. The percentages of viable, apoptotic and necrotic cells were determined by FACS-analysis for Annexin V-FITC and Propidiumiodide. Values are means ± SD of 3 independent experiments with consecutive passages. (*** p ≤ 0.001, ** p ≤ 0.005, * p < 0.05; one way ANOVA). The indicators of significance refer to the difference between the 250 μmol/l and the control series. The scales of the y-axis were adjusted to the different values for clarity and therefore vary.

Figure 3

Effects of TRD, TRAIL and combination of both agents on viability, apoptosis and necrosis in HT1080 cells measured by FACS-analysis: Cells were incubated with 250 μmol/l TRD and 50 ng/ml TRAIL alone and in combination as well as with Povidon 5% + H₂O (control) for 2 h, 6 h, 12 h, and 24 h. The percentages of viable, apoptotic and necrotic cells were determined by FACS-analysis for Annexin V-FITC and Propidiumiodide. Values are means ± SD of 3 independent experiments with consecutive passages (*** p ≤ 0.001, ** p ≤ 0.005; one way ANOVA). The indicators of significance refer to the difference between the TRD 250 μmol/l + TRAIL 50 ng/ml and the control series. The differences in the values compared to the single dose experiments are caused by experimental variability. The scales of the y-axis were adjusted to the different values for clarity and therefore vary.

Oligonucleotide microarray analysis

To identify the changes on gene expression level caused by the treatment with TRAIL and TRD, total RNA was purified from the cells after incubation with the different substances for 2 h using the RNeasy KIT from Qiagen (Hilden, Germany), as specified by the manufacturer. RNA integrity was assessed using the Agilent 2100 Bioanalyzer (Agilent Technologies).

For microarray analyses, we used the Affymetrix GeneChip platform employing a standard protocol for sample preparation and microarray hybridization. Total RNA (5 μg) was converted into biotinylated cRNA according to the Affymetrix standard protocol version 2, purified, fragmented and hybridized to HG-U133Plus_2.0 microarrays (Affymetrix). The arrays were washed and stained according to the manufacturer's recommendation and finally scanned in a GeneChip scanner 3000 (Affymetrix).

Array images were processed to determine signals and detection calls (Present, Absent, Marginal) for each probeset using the Affymetrix GCOS1.4 software (MAS 5.0 statistical algorithm). Arrays were scaled across all probesets to an average intensity of 1000 to compensate for variations in the amount and quality of the cRNA samples and other experimental variables of non-biological origin. Pairwise comparisons of treated versus control samples were carried out with GCOS1.4, which calculates the significance (change p-value) of each change in gene expression based on a Wilcoxon ranking test. To limit the number of false positives, we restricted further target identification to those probesets, which received at least one present detection call in the treated/control pair. Probesets exhibiting a significant increase or decrease were identified by filtering using the Affymetrix Data Mining Tool 3.0.

Real-time PCR for microarray data validation

Microarray data validation was performed for selected candidate genes (ARGHGDIA, BIRC3, GADD34, HSPA1A, HSPA1B, MAP3K14, MAP3K1). These were identified as the most differentially regulated ones in microarray analysis. Total RNA (2 μg) was reverse transcribed using the High Capacity cDNA Archive Kit (Applied Biosystems). Realtime PCR was done with a 7900 HT SDS system (Applied Biosystems) in 20 μl reaction volume containing 1× Master Mix, 1 μl assay and cDNA equivalent to 2 ng total RNA. All reagents and realtime PCR assays (ARGHGDIA Hs00976924 g1, BIRC3 Hs00154109 m1, GADD34 Hs00169585 m1, HSPA1A Hs00359163 s1, HSPA1B 01040501 +sH, MAP3K14 Hs01089753, MAP3K1 Hs00394890 m1) used were purchased from Applied Biosystems. Reactions were performed in duplicates and analysed by the deltadeltaCT method. Human GAPD was used for normalization.

Western Blot

To validate the findings of changed gene expression on protein level, Western Blots were performed using an SDS-page gel and the following antibodies (rabbit): Rho GDIα/ARGHGDIA (C-21), GADD 45α (H-165), c-IAP2/BIRC3 (H-85), GADD 34/PPP1R15A (S-20), NIK/MAP3K14 (H-248), and IκB-α/NFKBIA (C-21), purchased from Santa Cruz Biotechnology Inc. (Heidelberg, Germany). Total protein was purified from the cells after incubation with the different substances for two different time points (2 h and 4 h); for this purpose floating cells were collected together with the supernatant, adherent cells were harvested by trypsinization and added to the solution. Cells were sedimented by centrifugation. After removal of the supernatant, the probes were incubated with 50 μl Cell Culture Lysis Reagent (Promega Corporation, Mannheim, Germany) each for 1 h on ice; the cell remnants then sedimented by centrifugation and the supernatant containing the purified protein deep frosted until further use.

Nuclear extract was derived from cells treated with the different substances for 4 h using the Nuclear Extract Kit (Aktive Motif Europe, Rixensart, Belgium) according to the manufacturer's instructions.

NFKB-activity-ELISA

The transcription factor NFKB activity was detected and quantified using the TransAM™ NFKB Family Transcription Factor Assay Kit (Aktive Motif Europe, Rixensart, Belgium) according to the manufacturer's instructions and analyzed using a microplate absorbance reader Sunrise™ (Tecan trading AG, Switzerland). Nuclear extract, derived as specified above from cells treated with the different substances for 2 hours, was applied on a 96-well plate, to which oligonucleotide containing an NFKB consensus binding site has been immobilized. Activated NFKB specifically binds to these and was detected by using a primary antibody that is directed against the subunits p50, p52, p65, c-Rel, and RelB. An HRP-conjugated secondary antibody provided a colorimetric readout that was spectophotometrically analysed.

Results

HT1080 fibrosarcoma cells are TRAIL sensitive. TRAIL as single agent caused apoptotic cell death time and dose dependently. TRAIL 100 and 500 ng/ml significantly induced early apoptosis after 2 h and resulted in a significant increase of necrotic cells at the following time points. TRAIL 50 ng/ml, with 77.1% apoptotic cells, after 6 h reached almost the same efficiency concerning apoptosis but did not lead to comparable necrosis rates. Additionally, the effect on apoptosis lasted longer than in the 100 and 500 ng/ml group. At no time point did the percentage of necrotic cells significantly exceed the rates of necrotic cells of the control group. The lowest TRAIL concentration used (10 ng/ml) was significantly less effective in reducing viable cells than the other three concentrations (fig. 1). Therefore, TRAIL 50 ng/ml was used for the combination therapy.

TRD also induces apoptotic cell death in human HT1080 fibrosarcoma cells. The apoptogenic and necrosis inducing effects were dose and time dependent. The highest rate of apoptotic cells (after 12 h, 62.0%) and the most effective reduction of viable cells (after 12 h, 21.1%) was seen at a single concentration of 250 μmol/l. The apoptotic and necrotic effects of TRD 50 μmol/l were only moderate and did not reach significance at any time point compared to the control. TRD 100 and TRD 500 μmol/l also induced significant apoptotic cell death but were less effective than the 250 μmol/l concentration over all time points. (fig. 2). Therefore, TRD 250 μmol/l was chosen to be applied together with TRAIL 50 ng/ml.

Combination of TRAIL 50 ng/ml and TRD 250 μmol/l

After 6 h a significant increase of apoptotic cells (62.6%) was detected compared to TRAIL (p = 0.049) and TRD (p = 0.001) as single substances as well as compared to the control (p < 0.001), while necrosis was not significantly increased. After 12 h and 24 h, the necrotic proportion of cells increased and was significantly higher than in the single substances and the control group (p < 0.001), while the amount of apoptotic cells decreased again. The combination therapy reached the peak of apoptotic rates earlier and could transduce apoptotic cells to cell death more quickly, thereby reducing the proportion of viable cells more effectively (after 12 h, viable cells: 14.3%) than the single substances. TUNEL assay and cytochemistry also showed qualitatively against the control that cells treated with TRD/TRAIL, TRAIL, and TRD underwent apoptotic cell death (data not shown).

TRD and TRD/TRAIL induce morphological changes and cell detachment

TRAIL incubation did not change the cells' morphology and did not cause a detachment of the cells from the ground as shown by bright-field microscopy. TRD as single substance and the combination of TRD and TRAIL resulted in shrinkage of the cells, followed by complete cell detachment (fig. 4).

Figure 4

Phase contrast microscopic photographs showing morphologic changes induced by TRD, TRAIL and combination of both agents after 2 h: Cells were incubated with Povidon 5% + H₂O (control) (a), 50 ng/ml TRAIL (b), 250 μmol/l TRD (c) and a combination of TRD/TRAIL (d)

TRD, TRAIL and the combination therapy reduced proliferation of HT1080 significantly compared to the control (p < 0,001) as indicated by the BrdU-Assay (fig. 5). The combination therapy could not add to this effect compared to the incubation with TRD alone (p = 1.0), but reduced proliferation significantly compared to TRAIL alone (p < 0.001). The anti-proliferative potency of TRD was significantly higher than that of TRAIL (p < 0.001).

Figure 5

Effects of TRD, TRAIL and combination of both agents on proliferation were measured by BrdU cell proliferation-assay

Effects of TRD, TRAIL and combination of both agents on proliferation were measured by BrdU cell proliferation-assay. Cells were incubated for 8 h with Povidon 5% + H₂O (control) (a), 50 ng/ml TRAIL (b), 250 μmol/l TRD (c) and a combination of TRD/TRAIL (d). A blank negative control (e) was used to document absence of proliferation.

Gene expression

In this experiment we selectively focussed on apoptosis related probesets. Out of 621 of those probesets, 174, representing 138 apoptosis related genes, showed expression changes (fig. 6). TRD alone induced differences in the expression of 67 apoptosis related genes, of which 22 were "upregulated"; by comparison, TRAIL as a single substance caused expression changes of 36 genes related to apoptotic pathways, "upregulating" 22 of them. TRD and TRAIL in combination induced changes in the expression of 65 genes (29 upregulated, 28 downregulated) A list of these genes, including the log ratios of the expression changes, is given in table 1. Further filtering of the results, leaving only the genes whose expression changes that had a signal log ratio above 1 or below -1, reduced the number of differentially regulated genes in this experiment to 21 (25 probe sets) (fig. 7). The expression of selected candidate genes was re-evaluated by rtPCR, revealing a largely good correlation (table 2a/b).

Table 1

Additional information about the genes whose expression was changed more than two-fold in the experiments.

Gene Symbol

Ta250 vs Co Signal Log Ratio

Gene Symbol

TR50 vs Co Signal Log Ratio

Gene Symbol

Ta+TR vs Co Signal Log Ratio

Gene Symbol

Ta+TR vs Ta250 Signal Log Ratio

Gene Symbol

Ta+TR vs TR50 Signal Log Ratio

HSPA1A/B

2,99

ARHGDIA

1,19

HSPA1A/B

3,28

TIE1

0,89

HSPA1A/B

2,96

NFKBIA

2,03

NFKBIA

1,17

NFKBIA

2,47

AXL

0,85

GADD45A

1,55

GADD45A

1,33

TNFAIP3

1,11

PPP1R15A

1,55

IRF2

0,76

SGK

1,45

SGK

1,22

JUN

0,89

GADD45A

1,46

ERBB2

0,71

NFKBIA

1,3

JUN

1,2

EGFR

0,86

AXL

1,41

RELA

0,69

PPP1R15A

1,22

PPP1R15A

0,95

CALR

0,85

SGK

1,37

TIAF1

0,69

AXL

1,16

MCL1

0,94

TP53

0,64

DUSP1

1,33

TIMP3

0,67

MYC

1,01

DUSP1

0,82

TNK2

0,58

JUN

1,31

DUSP5

0,66

DUSP1

0,98

MYC

0,78

PPP2CB

0,57

IRF1

1,23

PPP1R15A

0,61

IRF1

0,84

BTG1

0,7

BAX

0,51

MYC

1,05

LITAF

0,6

BTG1

0,84

IRF1

0,69

IRF1

0,47

BTG1

0,85

IRF1

0,6

BCL2A1

0,52

AXL

0,64

IKBKG

0,44

DUSP5

0,65

TP53

0,57

BAG1

0,46

RPS3A

0,48

BCL2L1

0,44

TIE1

0,63

TYRO3

0,55

NEU1

0,41

LDHB

0,44

AXL

0,42

NEU1

0,63

LTBR

0,55

JUN

0,39

ESD

0,43

PPP2R1A

0,41

0,63

TYK2

0,54

ANXA4

0,37

HSPD1

0,42

CD44

0,38

TNFAIP3

0,55

SIPA1

0,54

GSTP1

0,31

RPS3A

0,41

TIE1

0,37

CDKN1A

0,55

TRAF4

0,53

CROP

-0,24

NME1

0,41

DUSP3

0,37

ACTN4

0,5

DOCK1

0,53

CASP8

-0,24

LGALS1

0,4

ACTN4

0,34

EPHA2

0,48

CSK

0,52

PPM1D

-0,31

ENO1

0,38

PEA15

0,32

GSTP1

0,47

ACIN1

0,52

API5

-0,32

STK17A

0,3

DAPK3

0,31

PPM1G

0,45

ARHGDIA

0,49

TNFRSF10B

-0,34

API5

-0,14

ACIN1

0,31

TIAF1

0,44

ABCA2

0,48

FOXO1

-0,37

DDR2

-0,15

BID

-0,23

CFL1

0,4

TNFRSF25

0,47

RAD21

-0,38

PDCD4

-0,17

MAP3K5

-0,27

LITAF

0,37

TNFRSF1A

0,47

EGFR

-0,39

E2F1

-0,18

FER

-0,27

PINK1

0,36

FGFR1

0,47

DUSP10

-0,45

LITAF

-0,2

FAS

-0,3

RPS3A

0,35

DNM2

0,47

NFKB1

-0,46

EPHB2

-0,21

CROP

-0,33

LGALS1

0,32

NFKBIA

0,45

FOXO3

-0,46

FGFR1

-0,22

HSPA9

-0,37

PPP1CA

0,29

EPHB2

0,45

RYBP

-0,49

RIPK1

-0,22

CHUK

-0,4

ENO1

0,28

IRF3

0,42

MCL1

-0,49

CSK

-0,25

LYN

-0,43

MAP3K1

-0,04

DDR2

0,42

DUSP3

-0,53

TIE1

-0,25

CUL2

-0,47

DUSP10

-0,21

WEE1

0,38

BCLAF1

-0,56

TNFRSF21

-0,25

TIA1

-0,49

FAS

-0,22

E2F1

0,36

TP53

-0,58

ACIN1

-0,28

PPM1B

-0,55

MCL1

-0,26

BAK1

0,36

HELLS

-0,61

PPP3CB

-0,28

CASP8

-0,68

CUL4A

-0,26

PPM1G

0,34

PPP2CB

-0,62

CHUK

-0,29

MCL1

-0,7

FADD

-0,27

FYN

0,31

DAPK3

-0,64

DAPK3

-0,29

TIA1

-0,28

RYK

0,3

TNFAIP3

-0,67

PPP2R1B

-0,29

PAWR

-0,29

DUSP1

0,3

SOCS2

-0,71

YWHAH

-0,29

PPP3CC

-0,31

ACTN4

0,3

CLK1

-0,72

RYK

-0,34

FOXO3

-0,32

CTSB

0,28

IKBKG

-0,74

MAP3K11

-0,35

TIA1

-0,34

HSPA1A/B

0,25

BAG5

-0,97

BCLAF1

-0,36

RIPK2

-0,34

SART1

0,24

BCL2L1

-0,99

DOCK1

-0,4

SOCS2

-0,37

DHCR24

0,24

CLK4

-1,02

F2R

-0,4

CASP7

-0,37

JUN

0,23

MET

-1,05

SIAH1

-0,41

CALR

-0,37

PPP4C

0,22

CALR

-1,23

AHR

-0,44

WEE1

-0,38

PPP2R1A

0,21

MAP3K1

-1,32

CASP8

-0,47

API5

-0,39

GSTP1

0,21

MAP3K14

-1,34

DUSP10

-0,48

MAP2K4

-0,41

YWHAH

0,2

CASP2

-1,7

MET

-0,51

ABL2

-0,42

PDCD4

0,18

ARHGDIA

-1,95

TP53

-0,52

CUL2

-0,44

FXR1

-0,24

BIRC3

-2,32

ABL2

-0,54

PPP2R1B

-0,45

PHB

-0,28

IKBKG

-0,54

SIAH1

-0,46

YES1

-0,29

RELA

-0,54

PPM1D

-0,46

CUL2

-0,38

ARHGDIA

-0,55

CHUK

-0,5

CUL4A

-0,39

SOCS2

-0,55

BCL2L1

-0,54

CASP7

-0,42

TIMP3

-0,55

TIA1

-0,56

BCLAF1

-0,42

CASP2

-0,59

CASP2

-0,56

CASP8

-0,49

CROP

-0,59

RYBP

-0,63

MET

-0,53

PRF1

-0,64

BCLAF1

-0,64

TFG

-0,84

CALR

-0,65

ARHGDIA

-0,74

MCL1

-1,5

WEE1

-0,66

CROP

-0,78

ERBB2

-0,8

CLK1

-0,88

CLK4

-0,81

MET

-0,91

BCL2L1

-0,82

CASP8

-0,97

BAG5

-0,9

CLK4

-0,99

CLK1

-0,92

BAG5

-1,08

MAP3K14

-1,35

BIRC3

-1,45

Table 2

a: Summary of the selected candidate genes' microarray data (/stands for no value).

Microarray Probeset

201167_x_at

201168_x_at

210538_s_at

202014_at

203725_at

200799_at

200800_s_at

202581_at

214786_at

205192_at

201502_s_at

Gene Symbol

SLR = log2(RQ)

ARHGDIA

ARHGDIA///LOC728908

BIRC3

PPP1R15A/Gadd34

GADD45A

HSPA1A

HSPA1A///HSPA1B

HSPA1B

MAP3K1

MAP3K14

NFKBIA

Ta+TR vs Ko_SLR

-0,74

-1,45

1,55

1,46

2,54

3,28

2,45

-0,04

2,47

TR50 vs Ko_SLR

1,19

0,43

1,17

Ta250 vs Ko_SLR

-0,55

-0,28

0,95

1,33

2,49

2,99

2,06

-1,35

2,03

Ta+TR vs TR50_SLR

-1,95

-2,32

1,22

1,55

2,61

2,96

2,44

-1,32

-1,34

1,3

Ta+TR vs Ta250_SLR

0,49

0,61

0,25

0,43

0,45

b: Summary of the selected candidate genes' rtPCR data. The correlation with the findings of the microarray is high except for ARGHGDIA.

Taqman assay

Hs00976924_g1

Hs00154109_m1

Hs00169585_m1

Hs00169255_m1

Hs00359163_s1

Hs01040501_+sH

Hs01089753

Hs00394890_m1

Hs00153283_m1

Gene Symbol

SLR = log2(RQ)

ARGHGDIA

BIRC3

GADD34

GADD45A

HSPA1A

HSPA1B

MAP3K14

MAP3K1

NFKBIA

TA+Tr vs Control

-0,4205

-1,1638

1,2819

2,4504

3,8893

3,1561

-0,8706

-0,5410

2,3151

TR50 vs Control

-0,1207

1,1527

0,2107

0,7523

0,4395

0,4545

0,1833

0,0203

1,5287

TA25 vs Control

0,0120

-0,3926

1,4327

2,8888

3,6653

3,5939

-0,7547

-0,1194

2,5517

TA+Tr vs TR50

-0,2998

-2,3165

1,0712

1,6981

3,4498

2,7016

-1,0539

-0,5613

0,7864

TA+Tr vs TA25

-0,4325

-0,7712

-0,1508

-0,4385

0,2240

-0,4378

-0,1159

-0,4217

-0,2366

Figure 6

Overall expression patterns of 174 reliably measured probe sets associated with apoptosis out 621 apoptosis associated probe sets of the HG-U133A_2.0 chip

Overall expression patterns of 174 reliably measured probe sets associated with apoptosis out 621 apoptosis associated probe sets of the HG-U133A_2.0 chip. Horizontal rows represent individual probe sets/genes; vertical columns represent individual samples (from left to right: Colour range: Brightest red: Signal Log Ratio (SLR) >= 2 (indicates expression level above compared sample); brightest green: SLR <= 2 (indicates expression level below compared sample); black: SLR = 0 (indicates unchanged expression); grey: no reliable filter target.

Figure 7

Overall expression patterns of 25 reliably measured probe sets associated with apoptosis out 621 apoptosis associated probe sets of the HG-U133A_2.0 chip

Overall expression patterns of 25 reliably measured probe sets associated with apoptosis out 621 apoptosis associated probe sets of the HG-U133A_2.0 chip. Horizontal rows represent individual probe sets/genes; vertical columns represent individual samples (from left to right: Colour range: Brightest red: Signal Log Ratio (SLR) >= 2 (indicates expression level above compared sample); brightest green: SLR <= 2 (indicates expression level below compared sample); black: SLR = 0 (indicates unchanged expression); grey: no reliable filter target.

Further analysis of the translation of the candidate genes after 2 and 4 h tested in the rtPCR was performed by Western Blot. The results are presented in figure 8. The results for NFKBIA, PPP1R15A, MAP3K14corresponded well to the rtPCR and microarray data, whereas the findings for ARHGDIA were partly oppositional to them. The other proteins (GADD45A, BIRC3) showed no such noticeable changes.

Figure 8

Representative Western Blot results for selected cytosolic proteins (M = marker, indicated by lines) after 2 and 4 h

Representative Western Blot results for selected cytosolic proteins (M = marker, indicated by lines) after 2 and 4 h.

The transcription factor NFKB activity was measured by quantifying its subunits p50, p52, p65, c-Rel, and RelB. The results for the several subunits are illustrated in figure 9. Although the changes of the single substances and the combination therapy compared to the control were not significant, it is noteworthy that the changes of TRD and TRAIL/TRD were always more pronounced than those of TRAIL as single substance.

Figure 9

Diagram showing the results of the NFKB-ELISA including the standard deviation of three separate measurements

Diagram showing the results of the NFKB-ELISA including the standard deviation of three separate measurements.

Discussion

To date, several reports suggested TRAIL as a promising substance in the treatment of sarcoma, especially when combined with other cytostatics.

Several studies found, that TRAIL was effective inducing apoptotic cell death and that the combination therapy of TRAIL and doxorubicin could overcome TRAIL resistance in a variety of soft tissue sarcoma cells 22.

In this study, TRAIL as a single substance effectively induced apoptotic cell death in HT1080 fibrosarcoma cells. Notably, only three genes (ARHGDIA, TNFAIP3, NFKBIA) were differentially up-regulated more than two-fold compared to the control: ARHGDIA (Rho Guanosine Diphosphate-Dissociation Inhibitor A), that inhibits dissociation of Guanosine Diphosphate (GDP) from RhoA, thereby preventing it from binding GTP (Guanosine Triphosphate) and inactivating it. RhoA, an important regulator of the cytoskeleton, cell adherence and cell motility, is associated to the occurrence of metastases in several tumors 2324. In HT1080 cells that show high levels of Rho-GTP the inhibition of Rho by fasudil, a Rho kinase inhibitor, leads to decreased tumor cell motility and growth 25. The findings that gene expression of ARHGDIA was decreased by the combination therapy and by TRD, whereas the protein could be detected at much higher cytosolic concentrations after treatment with TRAIL and TRD, so far cannot be explained but may be the reason for cell detachment and the changes in cell morphology. The fact that the Western Blot findings after 4 h corresponded much better to the findings after 2 h may be caused by the time translation takes to increase cytosolic protein concentration.

TNFAIP3, that was found to be up-regulated by TRAIL in our study, is an inhibitor of the NFKB pathway 26 and may thereby promote apoptosis but, on the other hand, it was shown to decrease TNF-mediated apoptosis and necrosis 27, leaving its specific influence unclear.

NFKBIA is an inhibitor of NFKB, which has been associated with resistance to chemotherapeutics such as doxorubicin 28. The doxorubicin analogon DA-125 could reduce proliferation in HT1080 fibrosarcoma cells through a NFKB dependent pathway 29 and recent studies showed that tumor invasiveness could be significantly reduced by inhibiting NFKB activity 30, pointing to this transcription factor as a key element in HT1080 proliferation-pathways. In our study, NFKBIA was found to be over-expressed on gene and on protein level after TRAIL, TRD and the combination therapy.

As previously reported, TRD lacks toxic short or long term effects but has the ability to induce apoptotic cell death in a variety of malignant cells. In several osteosarcoma cell lines, TRD has already been shown to induce apoptosis and decrease cell adhesion 31, but to the authors' knowledge TRD or the combination of TRAIL and TRD has not yet been investigated on soft tissue sarcoma. Interestingly, Taurolidine was shown to reduce toxicity of TNF in vivo without reducing its antitumoral activity; probably by interfering not with TNF directly but with its downstream pathway, which is largely the same for TRAIL 1632, qualifying this substance for co-treatment with TRAIL.

The changes in cell morphology and detachment of the cells from the ground that were observed after incubation with TRD may be explained by the finding of other studies; TRD reduced the expression of integrins and cadherins in colon cancer cells and reduced intraperitoneal metastases and tumor growth accordingly 33.

Gene expression profiling revealed a small number of genes whose expression was changed more than two-fold. Among them, the heat shock protein HSPA1A/B. Increased expression of this protein was associated with increased chemosensitivity of HT1080 to mitomycin C 34. Furthermore, the apoptogenic effects of taxanes on sarcoma could be increased by co-therapy with STA-4783, a stimulator of HSPA1A expression 35. NFKBIA, that was also up-regulated by TRD, has already been mentioned. Notably, there are reports that TRD inhibits the activation of NFKB not only indirectly through NFKBIA but, also by direct interference, by oxidation of NFKB at Met45 36.

Upregulation of GADD45A was shown to be associated with increased apoptosis and p53 independent cell cycle arrest in a variety of soft tissue sarcomas 37.

It inhibits transcription factors associated with tumor growth such as JNK (c-Jun N-terminal kinase) and NFKB 3839. For rhabdomyosarcoma, increased GADD45A was associated with less aggressive tumor behaviour 40. Additionally GADD45A may antagonize TNF-receptor mediated cytotoxicity 41. SGK, that was also found to be up-regulated in contrast to most of the other differentially expressed genes can activate the NFKB pathway and thereby prevent cells from undergoing apoptosis 42. In this context, this effect seems to be outweighed by other proapoptotic ones. JUN is activated JNK dependently and promotes apoptotic cell death in malignant cells including osteosarcoma 43. Downregulation of JUN was shown to decrease the expression of matrix metalloproteinases and thereby cellular invasiveness in HT1080 cells 44. This downregulation may be mediated through suppression of NFKB activation 45. MAP3K14, the only gene that was down-regulated more than two-fold by TRD, is a member of the TNF-pathway and activates NFKB (IKKalpha) 46.

The significant increase in apoptosis and necrosis using the combination of the two substances was accompanied by a large number of expression changes. Therefore, we will not further discuss the ones that were already described in the TRAIL and TRD section of the discussion; we summarized the remaining genes and their functions in table 3. Interestingly, there was only one gene with two-fold expression changes when the TRD/TRAIL cells were compared to those that were incubated with TRD alone: MCL1, that is expressed in a variety of soft tissue sarcomas and acts anti-apoptotic, was down-regulated 47.

Table 3

Summary of the expression changes of apoptosis related genes for the single substances (TRD 250 μmol/l, TRAIL 50 ng/ml) compared to untreated cells and the combination therapy compared to Control, TRD and TRAIL treated cells.

Gene Symbol

Gene Title

Synonyms

Gene function

NFKBIA

nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha

IkappaB-alpha, IkB-a, IkBa, Inhibitor of kappa B-alpha, MAD3, P40

Proliferation in HT1080 cells is mediated through a NFKB dependent pathways 2954.

Tumor invasiveness could be significantly reduced in HT1080 cells by reducing NFKB activity 30.

Increased NFKB activity leads to doxorubicin resistance in a p53 dependent manner 28.

HSPA1A/B

heat shock 70 kDa protein 1A/B

HSP70, HSP72, HSPA1

Upregulation of HSPA1A significantly increased chemosensitivity of HT1080 to mitomycin C 34.

The apoptogenic effects of taxanes on sarcoma could be increased by co-therapy with stimulators of HSPA1A expression 35.

SGK

serum/glucocorticoid regulated kinase

serine/threonine-protein kinase Sgk1, serum/glucocorticoid-regulated kinase 1, SGK1

SGK activates the NFKB pathway and thereby can prevent cells from undergoing apoptosis 42.

GADD45A

growth arrest and DNA-damage-inducible, alpha

DDIT1, DNA-damage-inducible transcript 1, GADD45, Growth arrest and DNA-damage-inducible protein, GADD45 alpha

Upregulation of GADD45A is associated with increased apoptosis and cell cycle arrest p53 independently in a variety of soft tissue sarcomas 37.

It inhibits transcription factors associated with tumor growth including the c-Jun N-terminal kinase (JNK) cascade and NFKB 38394155.

For rhabdomyosarcoma, increased GADD45A expression was associated with less aggressive tumor behaviour 40.

GADD45 may antagonize TNF-receptor mediated cytotoxicity 41.

ARHGDIA

Rho GDP dissociation inhibitor (GDI) alpha

GDIA1, MGC117248, RHOGDI, Rho GDI 1, Rho-GDI alpha, Rho GDP-dissociation inhibitor 1

High levels of Rho-GTP are detected in HT1080 cells. The inhibition of Rho by fasudil, a Rho kinase inhibitor lead to decreased tumor cell motility and growth in HT1080 cells 25 and associated to the development of metastases in several other malignant tumors 2324.

ARHGDIA is downregulated by doxorubicin in HT1080 cells 56.

PPP1R15A

protein phosphatase 1, regulatory (inhibitor) subunit 15A

GADD34, MyD116

Increased expression of PPP1R15A by chemosensitizers can potentiate the effects of cytostatics such as platinum agents 57 and probably acts p53 independently 58.

MYC

v-myc myelocytomatosis viral oncogene homolog (avian)

c-Myc, Myc proto-oncogene protein, transcription factor p64

Myc induces apoptosis by increasing the p53 levels JNK-dependently 59.

AXL

AXL receptor tyrosine kinase

oncogene tyrosine-protein kinase receptor UFO precursor, UFO

AXL is associated with metastatic potential of malignant cells by regulating adherence, motility, and invasiveness 60.

It can prevent cells from TNFalpha mediated cell death via the phosphatidylinositol 3-kinase 61 and the NFKB pathway 62.

MAP3K14

mitogen-activated protein kinase kinase kinase 14

FTDCR1B, HS, HsNIK, HSNIK, mitogen-activated protein kinase kinase kinase 14, NF-kappa beta-inducing kinase, NIK, serine/threonine-protein kinase NIK

MAP3K14 is a member of the TNF-Pathway and activates NFKB (IKKalpha) 46. The MAPkinase pathway can induce apoptosis by induction of the GADD family of genes (GADD 34, GADD 45) 63.

BIRC3

baculoviral IAP repeat-containing 3

AIP1, API2, apoptosis inhibitor 2, Baculoviral IAP repeat-containing protein 3, cIAP2, CIAP2, C-IAP2, HAIP1, HIAP1, hiap-1, HIAP-1, IAP1, IAP homolog C, inhibitor of apoptosis protein 1, MALT2, MIHC, RNF49, TNFR2-TRAF signalling complex protein 1

BIRC3 is associated with chemotherapy resistance in Ewing sarcoma, rhabdomyosarcoma 64 and prostatic cancer 65 and suppresses TNFalpha mediated cell death by preventing formation of TNF Receptor 1. It regulates pro-survival NFKB-signalling by promoting degradation of MAP3K14 66.

CALR

calreticulin

calregulin, calreticulin precursor, cC1qR, CRP55, CRTC, ERp60, FLJ26680, grp60, HACBP, RO, SSA

Calreticulin belongs to the family of heat shock proteins and strongly binds to TRAIL 67. Calreticulin is translocated to tumor cells' membranes after anthracyline therapy and stimulates the anti-tumor immune response 68.

DUSP1

dual specificity phosphatase 1

CL100, dual specificity protein phosphatase 1, dual specificity protein phosphatase hVH1, HVH1, MAP kinase phosphatase 1, MKP1, MKP-1, protein-tyrosine phosphatase CL100, PTPN10, VH1

DUSP inactivates MAP kinases 69 and can protect cells from apoptotic stimuli by chemotherapeutics 70.

JUN

v-jun sarcoma virus 17 oncogene homolog

activator protein 1, AP1, p39, proto-oncogene c-jun, transcription factor AP-1, V-jun avian sarcoma virus 17 oncogene homolog

Jun is activated by TRAIL JNK dependently and promotes apoptotic cell death in malignant cells including osteosarcoma 43.

Downregulation of JUN decreases the expression of matrix metalloproteinases and thereby cellular invasiveness in HT1080 cells 44. This down-regulation may be mediated through suppression off NFKB activation 45.

JUN is known to be a product of MAP2K4-activation and to mediate apoptosis by several chemotherapeutics 55.

upregulation of HSPA1A and JUN expression Chemosensitivity of HT1080 to mitomycin C could significantly be increased by 34.

IRF1

interferon regulatory factor 1

MAR

IRF1 inhibits cell growth and induces apoptosis via activation of caspases 1 and 7 71. It inhibits NFKB-dependent activation of matrix metalloproteinase-9 (MMP9) 72.

TNFAIP3

tumor necrosis factor, alpha-induced protein 3

A20, MGC104522, MGC138687, MGC138688, Putative DNA-binding protein A20, TNFA1P2, Zinc finger protein A20

TNFAIP3 down-regulates the TNF-α-induced NFKB signalling pathway 26 and reduces TNF mediated apoptosis and necrosis 27.

BAG5

BCL2-associated athanogene 5

BAG-5, BAG family molecular chaperone regulator 5, KIAA0873

BAG family members inhibit Hsp70 and promote cell growth and survival 73.

CLK4

CDC-like kinase 4

Dual specificity protein kinase CLK4

CLK family members prevent cells from undergoing intrinsic apoptosis 74.

MET

met proto-oncogene (hepatocyte growth factor receptor)

c-Met, Hepatocyte growth factor receptor precursor, HGF/SF receptor, HGFR, HGF receptor, Met proto-oncogene tyrosine kinase, RCCP2, Scatter factor receptor, SF receptor

Over-expression of MET was associated with enhanced proliferation and aggressive tumor biology in sarcomas75. Survival, anchorage dependent growth and invasiveness of sarcoma cells are dependent on MET 76.

MCL1

Myeloid cell leukemia sequence 1 (BCL2-related)

Bcl-2-related protein EAT/mcl1, EAT, Induced myeloid leukemia cell differentiation protein Mcl-1, mcl1/EAT, MCL1L, MCL1S, MGC104264, MGC1839, TM

MCL1 is expressed in a variety of soft tissue sarcomas and acts anti-apoptotic. Inhibition of MCL1 in combination with low dose cyclophosphamide significantly increases apoptosis in HT1080 cells 47.

MAP3K1

mitogen-activated protein kinase kinase kinase 1

MAPK/ERK kinase kinase 1, MAPKKK1, MEKK, MEKK1, MEKK 1, MEK kinase 1

MEKK is activating MAPK and JNK. Reduction of MEKK activity amplifies the apoptotic effect of TNFalpha on fibrosarcoma cells 77.

CASP2

caspase 2, apoptosis-related cysteine peptidase (neural precursor cell expressed, developmentally down-regulated 2)

apoptosis-related cysteine peptidase (neural precursor cell expressed, developmentally down-regulated 2), CASP-2, Caspase-2 precursor, ICH1, ICH-1L, ICH-1L/1S, ICH-1 protease, NEDD2

Casp2 is a member of the caspases family and mediates apoptotic cell death NFKB and Jun dependently but independent from Fas 78.

Signal log ratios of the changes are given for the several samples (TRD vs control, TRAIL vs control, TRD/TRAIL vs control, TRD/TRAIL vs TRD), signal log ratio of 1 representing a twofold increase, one of -1, that the expression is half of the expression of the control group and so forth.

Careful interpretation of the data revealed that many of the genes involved point to the NFKB pathway. In physiological conditions, NFKB is sequestered in inactive form by inhibitory proteins like NFKBIA 48, that was found to be up-regulated by the tested substances in the microarray, the PCR and the Western Blot analysis. Activation of the TNF-alpha pathway was shown to be more efficient inducing apoptosis when the NFKB pathway was blocked simultaneously 49 and could be a reason for enhanced apoptosis in the co-treatment with TRAIL and TRD.

In recent studies, tumor invasiveness could be significantly reduced in HT1080 cells by reducing NFKB activity 30 and NFKB inhibition could sensitise cells to TNF mediated cell death, probably by inhibiting the inactivating effect on JNK 50.

NFKB is activated TRADD-, TRAF3- and FADD-dependently 38 and also plays a key role in the survival of tumor cells by inducing expression of anti-apoptotic genes such as Bcl2, Bcl2l1, vascular endothelial growth factor (VEGF), and X-linked inhibitor of apoptosis (XIAP). Out of TRADD, TRAF3, FADD, Bcl2, and Bcl2l1, microarray analysis in this study could only detect changed expression for FADD and Bcl2l1. FADD was down-regulated by the TRAIL and TRD combination and Bcl2l1 was up-regulated by TRAIL but down-regulated by TRD and the combination (tab. 1). The effect on Bcl2l1 may partly explain the synergistic effects of the substances' combination. The fact that NFKB induces the expression of cell adhesion molecules 51 could be a reason for disruption of cell adherence in our experiments.

In summary, taking the changes in gene expression, protein concentration and the results of the NFKB activity assay into account, the effects of TRD, TRAIL and the combination of the two substances seem to be closely related to NFKB and its associated pathways 8. The changes in DNA binding activity of RelA (p65) and RelB, that was detected by the ELISA, may further support this assumption. RelA, c-Rel and RelB are known to contain C-terminal transcriptional activation domains (TADs), which enable them to activate target gene expression. In contrast, p50 that was increased and p52 that was found to be decreased, do not contain C-terminal TADs; therefore, p50 and p52 homodimers probably repress transcription unless they are bound to a protein containing a TAD, such as RelA, c-Rel or RelB 5253. Detailed knowledge about the function of these factors is scant though, especially concerning soft tissue sarcomas, so that we abstain from further interpretation.

Conclusion

Competing interests

The authors declare that they have no competing interests.

Authors' contributions

AD: developed the study design, coordinated the work, interpreted the data and prepared the manuscript. CB: carried out the experiments and interpreted the data. DB: coordinated the FACS analysis and interpreted the data. AG: established cell culture, interpreted the literature and prepared the manuscript. CG: coordinated and conceived the microscopy and interpreted the data. ML: developed the study design and corrected the manuscript. HUS: was helpful in preparing the manuscript and conceived the work. AF: did the Western Blot analysis and coordinated the laboratory work. LS: prepared the figures and coordinated cell culturing. LKH: carried out and interpreted the microarrays. UM: developed the idea, improved the study design and coordinated the work. WU: gave substantial contribution to the manuscript and the study design. AMC: carried out statistical analyses, have given substantial contribution to conception and design as well manuscript preparation.

Acknowledgements

We thank Amanda Daigeler for the formal English revision of the manuscript.

The authors thank Prof. Dr. W. E. Schmidt (Department of Medicine I, St. Josef Hospital, Ruhr-University of Bochum) and Prof. Dr. A. Muegge (Department of Medicine II, St. Josef Hospital, Ruhr-University of Bochum) for generously supporting our studies. Furthermore, they thank Annegret Flier, Ilka Werner, Kirsten Mros and Rainer Lebert for technical assistance and Jan Roschinsky for statistical analysis. This study was supported by FoRUM Project F544 E-2007 from the Ruhr-University Bochum, Germany.

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