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BMC Systems Biology publishes selected collections of research articles, conference proceedings, reviews and reports as supplements, which are free to access online. All articles published in supplements are subject to peer review; meeting abstracts undergo review and selection by the conference. Find out more about publishing a supplement with BioMed Central.

Volume 6 Supplement 1

Selected articles from The 5th IEEE International Conference on Systems Biology (ISB 2011)

Research

The 5th IEEE International Conference on Computational Systems Biology (ISB 2011)

Zhuhai, China

02-04 September 2011

Edited by Luonan Chen, Xiang-Sun Zhang and Yong Wang

Conference website

Introduction   Open Access

Modelling biological systems from molecules to dynamical networks

Yong Wang, Xiang-Sun Zhang, Luonan Chen BMC Systems Biology 2012, 6(Suppl 1):S1 (16 July 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

A computational procedure for identifying master regulator candidates: a case study on diabetes progression in Goto-Kakizaki rats

Guanying Piao, Shigeru Saito, Yidan Sun, Zhi-Ping Liu, Yong Wang, Xiao Han, Jiarui Wu, Huarong Zhou, Luonan Chen, Katsuhisa Horimoto BMC Systems Biology 2012, 6(Suppl 1):S2 (16 July 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

Bayesian inference based modelling for gene transcriptional dynamics by integrating multiple source of knowledge

Shu-Qiang Wang, Han-Xiong Li BMC Systems Biology 2012, 6(Suppl 1):S3 (16 July 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

Insights into the pathogenesis of axial spondyloarthropathy from network and pathway analysis

Jing Zhao, Jie Chen, Ting-Hong Yang, Petter Holme BMC Systems Biology 2012, 6(Suppl 1):S4 (16 July 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

The drug cocktail network

Ke-Jia Xu, Jiangning Song, Xing-Ming Zhao BMC Systems Biology 2012, 6(Suppl 1):S5 (16 July 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

Discovering protein complexes in protein interaction networks via exploring the weak ties effect

Xiaoke Ma, Lin Gao BMC Systems Biology 2012, 6(Suppl 1):S6 (16 July 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

Inferring domain-domain interactions from protein-protein interactions in the complex network conformation

Chen Chen, Jun-Fei Zhao, Qiang Huang, Rui-Sheng Wang, Xiang-Sun Zhang BMC Systems Biology 2012, 6(Suppl 1):S7 (16 July 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

On optimal control policy for probabilistic Boolean network: a state reduction approach

Xi Chen, Hao Jiang, Yushan Qiu, Wai-Ki Ching BMC Systems Biology 2012, 6(Suppl 1):S8 (16 July 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

Time delay induced transition of gene switch and stochastic resonance in a genetic transcriptional regulatory model

Canjun Wang, Ming Yi, Keli Yang, Lijian Yang BMC Systems Biology 2012, 6(Suppl 1):S9 (16 July 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

Absorbing phenomena and escaping time for Muller's ratchet in adaptive landscape

Shuyun Jiao, Ping Ao BMC Systems Biology 2012, 6(Suppl 1):S10 (16 July 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

Characterizing criticality of proteins by systems dynamics: Escherichia coli central carbon metabolism as a working example

Ru-Dong Li, Lei Liu BMC Systems Biology 2012, 6(Suppl 1):S11 (16 July 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

Tracing dynamic biological processes during phase transition

Tao Zeng, Luonan Chen BMC Systems Biology 2012, 6(Suppl 1):S12 (16 July 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

Synchronization ability of coupled cell-cycle oscillators in changing environments

Wei Zhang, Xiufen Zou BMC Systems Biology 2012, 6(Suppl 1):S13 (16 July 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

Systematic variations associated with renal disease uncovered by parallel metabolomics of urine and serum

Xianfu Gao, Wanjia Chen, Rongxia Li, Minfeng Wang, Chunlei Chen, Rong Zeng, Yueyi Deng BMC Systems Biology 2012, 6(Suppl 1):S14 (16 July 2012)

Abstract | Full text | PDF | PubMed | F1000 Biology

Research   Open Access

Revealing metabolite biomarkers for acupuncture treatment by linear programming based feature selection

Yong Wang, Qiao-Feng Wu, Chen Chen, Ling-Yun Wu, Xian-Zhong Yan, Shu-Guang Yu, Xiang-Sun Zhang, Fan-Rong Liang BMC Systems Biology 2012, 6(Suppl 1):S15 (16 July 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

Parallel-META: efficient metagenomic data analysis based on high-performance computation

Xiaoquan Su, Jian Xu, Kang Ning BMC Systems Biology 2012, 6(Suppl 1):S16 (16 July 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

Integrating many co-splicing networks to reconstruct splicing regulatory modules

Chao Dai, Wenyuan Li, Juan Liu, Xianghong Zhou BMC Systems Biology 2012, 6(Suppl 1):S17 (16 July 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

High precision alignment of cryo-electron subtomograms through gradient-based parallel optimization

Min Xu, Frank Alber BMC Systems Biology 2012, 6(Suppl 1):S18 (16 July 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

A novel neural response algorithm for protein function prediction

Hari Yalamanchili, Quan-Wu Xiao, Junwen Wang BMC Systems Biology 2012, 6(Suppl 1):S19 (16 July 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

In silico identification of a multi-functional regulatory protein involved in Holliday junction resolution in bacteria

Yan Zhang, Jie Lin, Yang Gao BMC Systems Biology 2012, 6(Suppl 1):S20 (16 July 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

The preservation of bidirectional promoter architecture in eukaryotes: what is the driving force?

Chao Xu, Jiajia Chen, Bairong Shen BMC Systems Biology 2012, 6(Suppl 1):S21 (16 July 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

BBH-LS: an algorithm for computing positional homologs using sequence and gene context similarity

Melvin Zhang, Hon Leong BMC Systems Biology 2012, 6(Suppl 1):S22 (16 July 2012)

Abstract | Full text | PDF | PubMed

Correction   Open Access

Correction: Tracing dynamic biological processes during phase transition

Tao Zeng, Luonan Chen BMC Systems Biology 2012, 6(Suppl 1):S23 (23 August 2012)

Full text | PDF | PubMed


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