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Editor-in-Chief Melissa Norton, MD Biology Editor Penelope Webb, PhD In-house Editor Tim Sands PhD
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BMC Systems Biology, Volume 3
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Research article
     How to identify essential genes from molecular networks? Gabriel del Rio, Dirk Kosch tzki, Gerardo Coello BMC Systems Biology 2009, 3:102 (13 October 2009) [Abstract] [Full text] [PDF] [PubMed] [Related articles] Research article
    Investigating the robustness of the classical enzyme kinetic equations in small intracellular compartments Ramon Grima BMC Systems Biology 2009, 3:101 (8 October 2009) [Abstract] [Full text] [PDF] [PubMed] [Related articles] Research article
     Computational modelling of cancerous mutations in the EGFR/ERK signalling pathway Richard J Orton, Michiel E Adriaens, Amelie Gormand, Oliver E Sturm, Walter Kolch, David R Gilbert BMC Systems Biology 2009, 3:100 (5 October 2009) [Abstract] [Full text] [PDF] [PubMed] [Related articles] Software
     An editor for pathway drawing and data visualization in the Biopathways Workbench Robert W Byrnes, Dawn Cotter, Andreia Maer, Joshua Li, David Nadeau, Shankar Subramaniam BMC Systems Biology 2009, 3:99 (2 October 2009) [Abstract] [Full text] [PDF] [PubMed] [Related articles] Methodology article
     Transforming Boolean models to continuous models: methodology and application to T-cell receptor signaling Dominik M Wittmann, Jan Krumsiek, Julio Saez-Rodriguez, Douglas A Lauffenburger, Steffen Klamt, Fabian J Theis BMC Systems Biology 2009, 3:98 (28 September 2009) [Abstract] [Full text] [PDF] [PubMed] [Related articles] Research article
    Modeling system states in liver cells: Survival, apoptosis and their modifications in response to viral infection Nicole Philippi, Dorothee Walter, Rebekka Schlatter, Karine Ferreira, Michael Ederer, Oliver Sawodny, Jens Timmer, Christoph Borner, Thomas Dandekar BMC Systems Biology 2009, 3:97 (22 September 2009) [Abstract] [Full text] [PDF] [PubMed] [Related articles] Research article
    The capacity for multistability in small gene regulatory networks Dan Siegal-Gaskins, Erich Grotewold, Gregory D Smith BMC Systems Biology 2009, 3:96 (21 September 2009) [Abstract] [Full text] [PDF] [PubMed] [Related articles] Research article
    A method for determining the robustness of bio-molecular oscillator models Reza Ghaemi, Jing Sun, Pablo A Iglesias, Domitilla Del Vecchio BMC Systems Biology 2009, 3:95 (21 September 2009) [Abstract] [Full text] [PDF] [PubMed] [Related articles] Research article
    Inferring Drosophila gap gene regulatory network: a parameter sensitivity and perturbation analysis Yves Fomekong-Nanfack, Marten Postma, Jaap A Kaandorp BMC Systems Biology 2009, 3:94 (21 September 2009) [Abstract] [Full text] [PDF] [PubMed] [Related articles] Research article
    Dissecting the fission yeast regulatory network reveals phase-specific control elements of its cell cycle Pierre R Bushel, Nicholas A Heard, Roee Gutman, Liwen Liu, Shyamal D Peddada, Saumyadipta Pyne BMC Systems Biology 2009, 3:93 (16 September 2009) [Abstract] [Full text] [PDF] [PubMed] [Related articles] Research article
     A systems biology framework for modeling metabolic enzyme inhibition of Mycobacterium tuberculosis Xin Fang, Anders Wallqvist, Jaques Reifman BMC Systems Biology 2009, 3:92 (15 September 2009) [Abstract] [Full text] [PDF] [PubMed] [Related articles] Research article
     Metabolism as means for hypoxia adaptation: metabolic profiling and flux balance analysis Jacob D Feala, Laurence Coquin, Dan Zhou, Gabriel G Haddad, Giovanni Paternostro, Andrew D McCulloch BMC Systems Biology 2009, 3:91 (9 September 2009) [Abstract] [Full text] [PDF] [PubMed] [Related articles] Research article
     The smallest chemical reaction system with bistability Thomas Wilhelm BMC Systems Biology 2009, 3:90 (8 September 2009) [Abstract] [Full text] [PDF] [PubMed] [Related articles] [1 comment] Research article
    Hybrid stochastic simplifications for multiscale gene networks Alina Crudu, Arnaud Debussche, Ovidiu Radulescu BMC Systems Biology 2009, 3:89 (7 September 2009) [Abstract] [Full text] [PDF] [PubMed] [Related articles] Research article
     The crosstalk between EGF, IGF, and Insulin cell signaling pathways - computational and experimental analysis Rafal Zielinski, Pawel F Przytycki, Jie Zheng, David Zhang, Teresa M Przytycka, Jacek Capala BMC Systems Biology 2009, 3:88 (4 September 2009) [Abstract] [Full text] [PDF] [PubMed] [Related articles] Research article
    The genotype-phenotype relationship in multicellular pattern-generating models - the neglected role of pattern descriptors Harald Martens, Siren R Veflingstad, Erik Plahte, Magni Martens, Dominique Bertrand, Stig W Omholt BMC Systems Biology 2009, 3:87 (4 September 2009) [Abstract] [Full text] [PDF] [PubMed] [Related articles] Research article
     Large-scale analysis of Arabidopsis transcription reveals a basal co-regulation network Osnat Atias, Benny Chor, Daniel A Chamovitz BMC Systems Biology 2009, 3:86 (3 September 2009) [Abstract] [Full text] [PDF] [PubMed] [Related articles] Research article
     From gene expression to gene regulatory networks in Arabidopsis thaliana Chris J Needham, Iain W Manfield, Andrew J Bulpitt, Philip M Gilmartin, David R Westhead BMC Systems Biology 2009, 3:85 (3 September 2009) [Abstract] [Full text] [PDF] [PubMed] [Related articles] Research article
     Specialized or flexible feed-forward loop motifs: a question of topology Javier Mac a, Stefanie Widder, Ricard Sol BMC Systems Biology 2009, 3:84 (31 August 2009) [Abstract] [Full text] [PDF] [PubMed] [Related articles] Research article
    Monte Carlo analysis of an ODE Model of the Sea Urchin Endomesoderm Network Clemens K hn, Christoph Wierling, Alexander K hn, Edda Klipp, Georgia Panopoulou, Hans Lehrach, Albert J Poustka BMC Systems Biology 2009, 3:83 (23 August 2009) [Abstract] [Full text] [PDF] [PubMed] [Related articles]
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