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Genomics and evolution

This section considers studies in the evolution of plants as well as comparative genomics in relation to plant biology.

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11.

Research article   Open Access

Ginger and turmeric expressed sequence tags identify signature genes for rhizome identity and development and the biosynthesis of curcuminoids, gingerols and terpenoids

Hyun Jo Koo, Eric T McDowell, Xiaoqiang Ma, Kevin A Greer, Jeremy Kapteyn, Zhengzhi Xie, Anne Descour, HyeRan Kim, Yeisoo Yu, David Kudrna, Rod A Wing, Carol A Soderlund, David R Gang BMC Plant Biology 2013, 13:27 (15 February 2013)

Abstract | Full text | PDF | ePUB | PubMed

12.

Research article   Open Access Highly Accessed

Characterization of the basal angiosperm Aristolochia fimbriata: a potential experimental system for genetic studies

Barbara J Bliss, Stefan Wanke, Abdelali Barakat, Saravanaraj Ayyampalayam, Norman Wickett, P Kerr Wall, Yuannian Jiao, Lena Landherr, Paula E Ralph, Yi Hu, Christoph Neinhuis, Jim Leebens-Mack, Kathiravetpilla Arumuganathan, Sandra W Clifton, Siela N Maximova, Hong Ma, Claude W dePamphilis BMC Plant Biology 2013, 13:13 (24 January 2013)

Abstract | Full text | PDF | ePUB | PubMed

13.

Research article   Open Access Highly Accessed

Transcriptome analysis of bitter acid biosynthesis and precursor pathways in hop (Humulus lupulus)

Shawn M Clark, Vinidhra Vaitheeswaran, Stephen J Ambrose, Randy W Purves, Jonathan E Page BMC Plant Biology 2013, 13:12 (24 January 2013)

Abstract | Full text | PDF | PubMed

14.

Research article   Open Access Highly Accessed

Genome-wide identification of alternate bearing-associated microRNAs (miRNAs) in olive (Olea europaea L.)

Huriye Yanik, Mine Turktas, Ekrem Dundar, Pilar Hernandez, Gabriel Dorado, Turgay Unver BMC Plant Biology 2013, 13:10 (15 January 2013)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

15.

Research article   Open Access Highly Accessed

Selaginella moellendorffii has a reduced and highly conserved expansin superfamily with genes more closely related to angiosperms than to bryophytes

Robert E Carey, Nathan K Hepler, Daniel J Cosgrove BMC Plant Biology 2013, 13:4 (3 January 2013)

Abstract | Provisional PDF | PubMed

16.

Research article   Open Access Highly Accessed

Partial functional conservation of IRX10 homologs in physcomitrella patens and Arabidopsis thaliana indicates an evolutionary step contributing to vascular formation in land plants

Emma Hörnblad, Mikael Ulfstedt, Hans Ronne, Alan Marchant BMC Plant Biology 2013, 13:3 (3 January 2013)

Abstract | Full text | PDF | PubMed

17.

Research article   Open Access Highly Accessed

Analysis of ripening-related gene expression in papaya using an Arabidopsis-based microarray

João Paulo Fabi, Graham B Seymour, Neil S Graham, Martin R Broadley, Sean T May, Franco Maria Lajolo, Beatriz Rosana Cordenunsi, João Roberto Oliveira do Nascimento BMC Plant Biology 2012, 12:242 (21 December 2012)

Abstract | Full text | PDF | PubMed

18.

Research article   Open Access Highly Accessed

Endo-(1,4)-β-Glucanase gene families in the grasses: temporal and spatial Co-transcription of orthologous genes1

Margaret Buchanan, Rachel A Burton, Kanwarpal S Dhugga, Antoni J Rafalski, Scott V Tingey, Neil J Shirley, Geoffrey B Fincher BMC Plant Biology 2012, 12:235 (11 December 2012)

Abstract | Full text | PDF | PubMed

19.

Research article   Open Access

The tomato RLK superfamily: phylogeny and functional predictions about the role of the LRRII-RLK subfamily in antiviral defense

Tetsu Sakamoto, Michihito Deguchi, Otávio JB Brustolini, Anésia A Santos, Fabyano F Silva, Elizabeth PB Fontes BMC Plant Biology 2012, 12:229 (2 December 2012)

Abstract | Full text | PDF | PubMed

20.

Research article   Open Access

The Plant Short-Chain Dehydrogenase (SDR) superfamily: genome-wide inventory and diversification patterns

Hanane Moummou, Yvonne Kallberg, Libert Brice Tonfack, Bengt Persson, Benoît van der Rest BMC Plant Biology 2012, 12:219 (20 November 2012)

Abstract | Full text | PDF | PubMed

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