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Analyses of the sucrose synthase gene family in cotton: structure, phylogeny and expression patterns
Aiqun Chen, Shae He, Feifei Li, Zhao Li, Mingquan Ding, Qingpo Liu, Junkang Rong BMC Plant Biology 2012, 12:85 (13 June 2012)
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The organ-specific expression of terpene synthase genes contributes to the terpene hydrocarbon composition of chamomile essential oils
Sandra Irmisch, Sandra T Krause, Grit Kunert, Jonathan Gershenzon, Jörg Degenhardt, Tobias G Köllner BMC Plant Biology 2012, 12:84 (8 June 2012)
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Interactions of an Arabidopsis RanBPM homologue with LisH-CTLH domain proteins revealed high conservation of CTLH complexes in eukaryotes
Eva Tomaštíková, Věra Cenklová, Lucie Kohoutová, Beáta Petrovská, Lenka Váchová, Petr Halada, Gabriela Kočárová, Pavla Binarová BMC Plant Biology 2012, 12:83 (7 June 2012)
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Factors influencing fecundity in experimental crosses of water lotus (Nelumbo nucifera Gaertn.) cultivars
Nian-Jun Teng, Yan-Li Wang, Chun-Qing Sun, Wei-Min Fang, Fa-Di Chen BMC Plant Biology 2012, 12:82 (7 June 2012)
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Myosins XI-K, XI-1, and XI-2 are required for development of pavement cells, trichomes, and stigmatic papillae in Arabidopsis
Eve-Ly Ojangu, Krista Tanner, Pille Pata, Kristel Järve, Carola L Holweg, Erkki Truve, Heiti Paves BMC Plant Biology 2012, 12:81 (6 June 2012)
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In silico polymorphism analysis for the development of simple sequence repeat and transposon markers and construction of linkage map in cultivated peanut
Kenta Shirasawa, Padmalatha Koilkonda, Koh Aoki, Hideki Hirakawa, Satoshi Tabata, Manabu Watanabe, Makoto Hasegawa, Hiroyuki Kiyoshima, Shigeru Suzuki, Chikara Kuwata, Yoshiki Naito, Tsutomu Kuboyama, Akihiro Nakaya, Shigemi Sasamoto, Akiko Watanabe, Midori Kato, Kumiko Kawashima, Yoshie Kishida, Mitsuyo Kohara, Atsushi Kurabayashi, Chika Takahashi, Hisano Tsuruoka, Tsuyuko Wada, Sachiko Isobe BMC Plant Biology 2012, 12:80 (6 June 2012)
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The 5′UTR-intron of the Gladiolus polyubiquitin promoter GUBQ1 enhances translation efficiency in Gladiolus and Arabidopsis
Kathryn Kamo, Ah-Young Kim, Se Park, Young Joung BMC Plant Biology 2012, 12:79 (6 June 2012)
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Co-ordinate regulation of cytokinin gene family members during flag leaf and reproductive development in wheat
Jiancheng Song, Lijun Jiang, Paula Jameson BMC Plant Biology 2012, 12:78 (6 June 2012)
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Balancing of sulfur storage in maize seed
Yongrui Wu, Wenqin Wang, Joachim Messing BMC Plant Biology 2012, 12:77 (30 May 2012)
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Intra-seasonal dynamics in metabolic processes of 13C/12C and 18O/16O in components of Scots pine twigs from southern Siberia interpreted with a conceptual framework based on the Carbon Metabolism Oscillatory Model
Victor Voronin, Alexander A Ivlev, Vladimir Oskolkov, Tatjana Boettger BMC Plant Biology 2012, 12:76 (30 May 2012)
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Inhibition of phenylpropanoid biosynthesis increases cell wall digestibility, protoplast isolation, and facilitates sustained cell division in American elm (Ulmus americana)
A Maxwell P Jones, Abhishek Chattopadhyay, Mukund Shukla, Jerzy Zoń, Praveen K Saxena BMC Plant Biology 2012, 12:75 (30 May 2012)
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Effects of yeast trehalose-6-phosphate synthase 1 on gene expression and carbohydrate contents of potato leaves under drought stress conditions
Mihály Kondrák, Ferenc Marincs, Ferenc Antal, Zsófia Juhász, Zsófia Bánfalvi BMC Plant Biology 2012, 12:74 (30 May 2012)
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Novel variants of HMW glutenin subunits from Aegilops section Sitopsis species in relation to evolution and wheat breeding
Qian-Tao Jiang, Jian Ma, Yu-Ming Wei, Ya-Xi Liu, Xiu-Jin Lan, Shou-Fen Dai, Zhen-Xiang Lu, Shan Zhao, Quan-Zhi Zhao, You-Liang Zheng BMC Plant Biology 2012, 12:73 (30 May 2012)
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Correlation between spatial (3D) structure of pea and bean thylakoid membranes and arrangement of chlorophyll-protein complexes
Izabela Rumak, Radosław Mazur, Katarzyna Gieczewska, Joanna Kozioł-Lipińska, Borys Kierdaszuk, Wojtek P Michalski, Brian J Shiell, Jan Venema, Wim J Vredenberg, Agnieszka Mostowska, Maciej Garstka BMC Plant Biology 2012, 12:72 (25 May 2012)
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Genetic basis of unstable expression of high gamma-tocopherol content in sunflower seeds
María J García-Moreno, José M Fernández-Martínez, Leonardo Velasco, Begoña Pérez-Vich BMC Plant Biology 2012, 12:71 (18 May 2012)
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Quantitative analysis of organelle distribution and dynamics in Physcomitrella patens protonemal cells
Fabienne Furt, Kyle Lemoi, Erkan Tüzel, Luis Vidali BMC Plant Biology 2012, 12:70 (17 May 2012)
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Development of high amylose wheat through TILLING
Ann J Slade, Cate McGuire, Dayna Loeffler, Jessica Mullenberg, Wayne Skinner, Gia Fazio, Aaron Holm, Kali M Brandt, Michael N Steine, John F Goodstal, Vic C Knauf BMC Plant Biology 2012, 12:69 (14 May 2012)
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miRFANs: an integrated database for Arabidopsis thaliana microRNA function annotations
Hui Liu, Ting Jin, Ruiqi Liao, Linxia Wan, Bin Xu, Shuigeng Zhou, Jihong Guan BMC Plant Biology 2012, 12:68 (14 May 2012)
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A generalized deceptive pollination system of Doritis pulcherrima (Aeridinae: Orchidaceae) with non-reconfigured pollinaria
Jin Xiaohua, Li Dezhu, Ren Zongxin, Xiang Xiaoguo BMC Plant Biology 2012, 12:67 (9 May 2012)
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Nitrate transport in cucumber leaves is an inducible process involving an increase in plasma membrane H+-ATPase activity and abundance
Miroslav Nikolic, Stefano Cesco, Rossella Monte, Nicola Tomasi, Stefano Gottardi, Anita Zamboni, Roberto Pinton, Zeno Varanini BMC Plant Biology 2012, 12:66 (9 May 2012)
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Comparative analyses reveal potential uses of Brachypodium distachyon as a model for cold stress responses in temperate grasses
Chuan Li, Heidi Rudi, Eric J Stockinger, Hongmei Cheng, Moju Cao, Samuel E Fox, Todd C Mockler, Bjørge Westereng, Siri Fjellheim, Odd Rognli, Simen R Sandve BMC Plant Biology 2012, 12:65 (8 May 2012)
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Chromosome arm-specific BAC end sequences permit comparative analysis of homoeologous chromosomes and genomes of polyploid wheat
Sunish K Sehgal, Wanlong Li, Pablo D Rabinowicz, Agnes Chan, Hana Šimková, Jaroslav Doležel, Bikram S Gill BMC Plant Biology 2012, 12:64 (4 May 2012)
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A novel mesh processing based technique for 3D plant analysis
Anthony Paproki, Xavier Sirault, Scott Berry, Robert Furbank, Jurgen Fripp BMC Plant Biology 2012, 12:63 (3 May 2012)
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Editor’s summary
A novel 3D mesh based technique developed for temporal high-throughput and high-resolution plant phenomics shows low error rates and fast processing times when assessing vegetative growth in Gossypium hirsutum.
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The response and recovery of the Arabidopsis thaliana transcriptome to phosphate starvation
Jongchan Woo, Cameron MacPherson, Jun Liu, Huan Wang, Takatoshi Kiba, Matthew A Hannah, Xiu-Jie Wang, Vladimir B Bajic, Nam-Hai Chua BMC Plant Biology 2012, 12:62 (3 May 2012)
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Editor’s summary
Genome-wide profiling of the response of Arabidopsis thaliana roots and shoots to phosphate starvation is the most complete study to date on plant nutrient stress and uncovers a much larger, staged response to phosphate-starvation than previously described.
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De novo assembly of the carrot mitochondrial genome using next generation sequencing of whole genomic DNA provides first evidence of DNA transfer into an angiosperm plastid genome
Massimo Iorizzo, Douglas Senalik, Marek Szklarczyk, Dariusz Grzebelus, David Spooner, Philipp Simon BMC Plant Biology 2012, 12:61 (1 May 2012)
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RNAi-mediated silencing of the HD-Zip gene HD20 in Nicotiana attenuata affects benzyl acetone emission from corollas via ABA levels and the expression of metabolic genes
Delfina A Ré, Brenda Raud, Raquel L Chan, Ian T Baldwin, Gustavo Bonaventure BMC Plant Biology 2012, 12:60 (1 May 2012)
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The mechanism of pollination drop withdrawal in Ginkgo biloba L.
Biao Jin, Lei Zhang, Yan Lu, Di Wang, Xiao X Jiang, Min Zhang, Li Wang BMC Plant Biology 2012, 12:59 (1 May 2012)
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Phylogeographic analysis reveals significant spatial genetic structure of Incarvillea sinensis as a product of mountain building
Shaotian Chen, Yaowu Xing, Tao Su, Zhekun Zhou, Emeritus David L Dilcher, Douglas E Soltis BMC Plant Biology 2012, 12:58 (30 April 2012)
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Chloroplastic Hsp100 chaperones ClpC2 and ClpD interact in vitro with a transit peptide only when it is located at the N-terminus of a protein
Eduardo M Bruch, Germán L Rosano, Eduardo A Ceccarelli BMC Plant Biology 2012, 12:57 (30 April 2012)
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Genome-wide association mapping of flowering time and northern corn leaf blight (Setosphaeria turcica) resistance in a vast commercial maize germplasm set
Delphine Van Inghelandt, Albrecht E Melchinger, Jean-Pierre Martinant, Benjamin Stich BMC Plant Biology 2012, 12:56 (30 April 2012)
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Experimental evidence for the ancestry of allotetraploid Trifolium repens and creation of synthetic forms with value for plant breeding
Warren M Williams, Nicholas W Ellison, Helal A Ansari, Isabelle M Verry, S Hussain BMC Plant Biology 2012, 12:55 (24 April 2012)
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Arabidopsis senescence-associated protein DMP1 is involved in membrane remodeling of the ER and tonoplast
Alexis Kasaras, Michael Melzer, Reinhard Kunze BMC Plant Biology 2012, 12:54 (24 April 2012)
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Transcriptome analysis of stem development in the tumourous stem mustard Brassica juncea var. tumida Tsen et Lee by RNA sequencing
Quan Sun, Guanfan Zhou, Yingfan Cai, Yonghong Fan, Xiaoyan Zhu, Yihua Liu, Xiaohong He, Jinjuan Shen, Huaizhong Jiang, Daiwen Hu, Zheng Pan, Liuxin Xiang, Guanghua He, Daiwen Dong, Jianping Yang BMC Plant Biology 2012, 12:53 (21 April 2012)
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The family of Deg/HtrA proteases in plants
Holger Schuhmann, Pitter F Huesgen, Iwona Adamska BMC Plant Biology 2012, 12:52 (20 April 2012)
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Atypical DNA methylation of genes encoding cysteine-rich peptides in Arabidopsis thaliana
Wanhui You, Agata Tyczewska, Matthew Spencer, Lucia Daxinger, Marc W Schmid, Ueli Grossniklaus, Stacey A Simon, Blake C Meyers, Antonius JM Matzke, Marjori Matzke BMC Plant Biology 2012, 12:51 (19 April 2012)
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A quadruple mutant of Arabidopsis reveals a β-carotene hydroxylation activity for LUT1/CYP97C1 and a regulatory role of xanthophylls on determination of the PSI/PSII ratio
Alessia Fiore, Luca Dall'Osto, Stefano Cazzaniga, Gianfranco Diretto, Giovanni Giuliano, Roberto Bassi BMC Plant Biology 2012, 12:50 (18 April 2012)
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Loss of genetic diversity as a signature of apricot domestication and diffusion into the Mediterranean Basin
Hedia Bourguiba, Jean-Marc Audergon, Lamia Krichen, Neila Trifi-Farah, Ali Mamouni, Samia Trabelsi, Claudio D’Onofrio, Bayram M Asma, Sylvain Santoni, Bouchaib Khadari BMC Plant Biology 2012, 12:49 (17 April 2012)
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Changes in DNA methylation and transgenerational mobilization of a transposable element (mPing) by the Topoisomerase II inhibitor, Etoposide, in rice
Xuejiao Yang, Yingjie Yu, Lily Jiang, Xiuyun Lin, Chunyu Zhang, Xiufang Ou, Kenji Osabe, Bao Liu BMC Plant Biology 2012, 12:48 (9 April 2012)
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Editor’s summary
The topoisomerase II inhibitor etoposide can induce both transgenerational genome instability and epigenetic changes in DNA methylation in a genotype-dependent manner in rice, demonstrating similar genotoxic stress in plant cells to that previously shown in animals.
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Phenotypic plasticity, QTL mapping and genomic characterization of bud set in black poplar
Francesco Fabbrini, Muriel Gaudet, Catherine Bastien, Giusi Zaina, Antoine Harfouche, Isacco Beritognolo, Nicolas Marron, Michele Morgante, Giuseppe Scarascia-Mugnozza, Maurizio Sabatti BMC Plant Biology 2012, 12:47 (3 April 2012)
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Generation and analysis of blueberry transcriptome sequences from leaves, developing fruit, and flower buds from cold acclimation through deacclimation
Lisa J Rowland, Nadim Alkharouf, Omar Darwish, Elizabeth L Ogden, James J Polashock, Nahla V Bassil, Dorrie Main BMC Plant Biology 2012, 12:46 (2 April 2012)
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Perturbation of cytokinin and ethylene-signalling pathways explain the strong rooting phenotype exhibited by Arabidopsis expressing the Schizosaccharomyces pombe mitotic inducer, cdc25
Natasha D Spadafora, David Parfitt, Angela Marchbank, Sherong Li, Leonardo Bruno, Rhys Vaughan, Jeroen Nieuwland, Vicky Buchanan-Wollaston, Robert J Herbert, Maria Bitonti, John Doonan, Diego Albani, Els Prinsen, Dennis Francis, Hilary J Rogers BMC Plant Biology 2012, 12:45 (27 March 2012)
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The arbuscular mycorrhizal status has an impact on the transcriptome profile and amino acid composition of tomato fruit
Alessandra Salvioli, Inès Zouari, Michel Chalot, Paola Bonfante BMC Plant Biology 2012, 12:44 (27 March 2012)
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Crop to wild introgression in lettuce: following the fate of crop genome segments in backcross populations
Brigitte Uwimana, Marinus JM Smulders, Danny AP Hooftman, Yorike Hartman, Peter H van Tienderen, Johannes Jansen, Leah K McHale, Richard W Michelmore, Richard GF Visser, Clemens CM van de Wiel BMC Plant Biology 2012, 12:43 (26 March 2012)
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Identification of expressed resistance gene-like sequences by data mining in 454-derived transcriptomic sequences of common bean (Phaseolus vulgaris L.)
Zhanji Liu, Mollee Crampton, Antonette Todd, Venu Kalavacharla BMC Plant Biology 2012, 12:42 (23 March 2012)
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Expression of the central growth regulator BIG BROTHER is regulated by multiple cis-elements
Holger Breuninger, Michael Lenhard BMC Plant Biology 2012, 12:41 (20 March 2012)
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The mitochondrial alternative oxidase pathway protects the photosynthetic apparatus against photodamage in Rumex K-1 leaves
Li-Tao Zhang, Zi-Shan Zhang, Hui-Yuan Gao, Xiang-Long Meng, Cheng Yang, Jian-Guo Liu, Qing-Wei Meng BMC Plant Biology 2012, 12:40 (20 March 2012)
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Differential effects of environment on potato phenylpropanoid and carotenoid expression
Raja S Payyavula, Duroy A Navarre, Joseph C Kuhl, Alberto Pantoja, Syamkumar S Pillai BMC Plant Biology 2012, 12:39 (20 March 2012)
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Chestnut resistance to the blight disease: insights from transcriptome analysis
Abdelali Barakat, Meg Staton, Chun-Huai Cheng, Joseph Park, Norzawani Yassin, Stephen Ficklin, Chia-Chun Yeh, Fred Hebard, Kathleen Baier, William Powell, Stephan C Schuster, Nicholas Wheeler, Albert Abbott, John E Carlson, Ronald Sederoff BMC Plant Biology 2012, 12:38 (19 March 2012)
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Functional interconnections of HY1 with MYC2 and HY5 in Arabidopsis seedling development
Babu Rajendra V Prasad, Selva V Kumar, Ashis Nandi, Sudip Chattopadhyay BMC Plant Biology 2012, 12:37 (17 March 2012)
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Proteomic characterisation of endoplasmic reticulum-derived protein bodies in tobacco leaves
Minu Joseph, M Dolors Ludevid, Margarita Torrent, Valérie Rofidal, Marc Tauzin, Michel Rossignol, Jean-Benoit Peltier BMC Plant Biology 2012, 12:36 (16 March 2012)
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