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		Correction Correction: Transcriptome analysis of stem development in the tumourous stem mustard Brassica juncea var. tumida Tsen et Lee by RNA sequencing Quan Sun, Guanfan Zhou, Yingfan Cai, Yonghong Fan, Xiaoyan Zhu, Yihua Liu, Xiaohong He, Jinjuan Shen, Huaizhong Jiang, Daiwen Hu, Zheng Pan, Liuxin Xiang, Guanghua He, Daiwen Dong, Jianping Yang BMC Plant Biology 2013, 13:90 (17 June 2013) Abstract \| Provisional PDF
		Research article Analysis of the WUSCHEL-RELATED HOMEOBOX gene family in the conifer picea abies reveals extensive conservation as well as dynamic patterns Harald Hedman, Tianqing Zhu, Sara von Arnold, Joel J Sohlberg BMC Plant Biology 2013, 13:89 (12 June 2013) Abstract \| Provisional PDF \| PubMed
		Research article Identification of stress-responsive genes in Ammopiptanthus mongolicus using ESTs generated from cold- and drought-stressed seedlings Meiqin Liu, Jing Shi, Cunfu Lu BMC Plant Biology 2013, 13:88 (5 June 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article High-throughput genotyping of wheat-barley amphiploids utilising diversity array technology (DArT) Almudena Castillo, María C Ramírez, Azahara C Martín, Andrzej Kilian, Antonio Martín, Sergio G Atienza BMC Plant Biology 2013, 13:87 (3 June 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Endophytic Penicillium funiculosum LHL06 secretes gibberellin that reprograms Glycine max L. growth during copper stress Abdul Khan, In-Jung Lee BMC Plant Biology 2013, 13:86 (31 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Two recently duplicated maize NAC transcription factor paralogs are induced in response to Colletotrichum graminicola infection Anna-Maria Voitsik, Steffen Muench, Holger B Deising, Lars M Voll BMC Plant Biology 2013, 13:85 (29 May 2013) Abstract \| Provisional PDF \| PubMed
		Research article Perturbing the metabolic dynamics of myo-inositol in developing Brassica napus seeds through in vivo methylation impacts its utilization as phytate precursor and affects downstream metabolic pathways Jinzhuo Dong, Wei Yan, Cheryl Bock, Kateryna Nokhrina, Wilf Keller, Fawzy Georges BMC Plant Biology 2013, 13:84 (21 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Database PLANEX: the plant co-expression database Won Yim, Yongbin Yu, Kitae Song, Cheol Jang, Byung-Moo Lee BMC Plant Biology 2013, 13:83 (20 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Methodology article An endogenous artificial microRNA system for unraveling the function of root endosymbioses related genes in Medicago truncatula Emanuel A Devers, Julia Teply, Armin Reinert, Nicole Gaude, Franziska Krajinski BMC Plant Biology 2013, 13:82 (16 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed \| Editor’s summary An artificial microRNA (amiR)-mediated gene silencing system for Medicago truncatula roots sheds light on the function of MtErf1, a putative transcription factor that is strongly induced in arbuscule-containing cells during mycorrhizal symbiosis.
		Database LIPS database with LIPService: a microscopic image database of intracellular structures in Arabidopsis guard cells Takumi Higaki, Natsumaro Kutsuna, Seiichiro Hasezawa BMC Plant Biology 2013, 13:81 (16 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Transcriptome resources and functional characterization of monoterpene synthases for two host species of the mountain pine beetle, lodgepole pine (Pinus contorta) and jack pine (Pinus banksiana) Dawn E Hall, Macaire M S Yuen, Sharon Jancsik, Alfonso Quesada, Harpreet K Dullat, Maria Li, Hannah Henderson, Adriana Arango-Velez, Nancy Y Liao, Roderick T Docking, Simon K Chan, Janice EK Cooke, Colette Breuil, Steven JM Jones, Christopher I Keeling, Jörg Bohlmann BMC Plant Biology 2013, 13:80 (16 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed \| Editor’s summary Generation and quality assessment of assembled transcriptome resources for lodgepole pine and jack pine identifies a number of monoterpene synthase-like genes involved in host defence against insect pests and fungal pathogens.
		Research article The cell morphogenesis ANGUSTIFOLIA (AN) gene, a plant homolog of CtBP/BARS, is involved in abiotic and biotic stress response in higher plants Emma W Gachomo, Jose C Jimenez-Lopez, Sarah R Smith, Anthony B Cooksey, Oteri M Oghoghomeh, Nicholas Johnson, Lamine Baba-Moussa, Simeon O Kotchoni BMC Plant Biology 2013, 13:79 (14 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Genetic characterization of a core collection of flax (Linum usitatissimum L.) suitable for association mapping studies and evidence of divergent selection between fiber and linseed types Braulio J Soto-Cerda, Axel Diederichsen, Raja Ragupathy, Sylvie Cloutier BMC Plant Biology 2013, 13:78 (6 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Tissue culture-induced genetic and epigenetic alterations in rice pure-lines, F1 hybrids and polyploids Xiaoran Wang, Rui Wu, Xiuyun Lin, Yan Bai, Congdi Song, Xiaoming Yu, Chunming Xu, Na Zhao, Yuzhu Dong, Bao Liu BMC Plant Biology 2013, 13:77 (5 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Enhanced resistance to the cellulose biosynthetic inhibitors, thaxtomin A and isoxaben in Arabidopsis thaliana mutants, also provides specific co-resistance to the auxin transport inhibitor, 1-NPA Robert S Tegg, Sergey N Shabala, Tracey A Cuin, Noel W Davies, Calum R Wilson BMC Plant Biology 2013, 13:76 (3 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Phylogeny and a structural model of plant MHX transporters Rachel Gaash, Meirav Elazar, Keren Mizrahi, Meital Avramov-Mor, Irina Berezin, Orit Shaul BMC Plant Biology 2013, 13:75 (2 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Molecular evidence for natural hybridization in the mangrove fern genus Acrostichum Rongshu Zhang, Ting Liu, Wei Wu, Yunqin Li, Lifang Chao, Lishi Huang, Yelin Huang, Suhua Shi, Renchao Zhou BMC Plant Biology 2013, 13:74 (1 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article NaMYC2 transcription factor regulates a subset of plant defense responses in Nicotiana attenuata Melkamu G Woldemariam, Son Truong Dinh, Youngjoo Oh, Emmanuel Gaquerel, Ian T Baldwin, Ivan Galis BMC Plant Biology 2013, 13:73 (1 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Evidence for extensive heterotrophic metabolism, antioxidant action, and associated regulatory events during winter hardening in Sitka spruce Eva Collakova, Curtis Klumas, Haktan Suren, Elijah Myers, Lenwood S Heath, Jason A Holliday, Ruth Grene BMC Plant Biology 2013, 13:72 (30 April 2013) Abstract \| Full text \| PDF \| PubMed
		Methodology article Fast-tracking development of homozygous transgenic cereal lines using a simple and highly flexible real-time PCR assay Jos C Mieog, Crispin A Howitt, Jean-Philippe Ral BMC Plant Biology 2013, 13:71 (30 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Genome-wide identification and functional analyses of calmodulin genes in Solanaceous species Yuan Zhao, Wei Liu, You-Ping Xu, Jia-Yi Cao, Janet Braam, Xin-Zhong Cai BMC Plant Biology 2013, 13:70 (27 April 2013) Abstract \| Provisional PDF \| PubMed
		Research article Silencing of Nicotiana benthamiana Neuroblastoma-Amplified Gene causes ER stress and cell death Jae-Yong Lee, Sujon Sarowar, Hee Seung Kim, Hyeran Kim, Inhwan Hwang, Young Jin Kim, Hyun-Sook Pai BMC Plant Biology 2013, 13:69 (27 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Transcriptional regulation of flavonoid biosynthesis in nectarine (Prunus persica) by a set of R2R3 MYB transcription factors Daniela Ravaglia, Richard V Espley, Rebecca A Henry-Kirk, Carlo Andreotti, Vanina Ziosi, Roger P Hellens, Guglielmo Costa, Andrew C Allan BMC Plant Biology 2013, 13:68 (25 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Ectopic expression of AtPAD4 broadens resistance of soybean to soybean cyst and root-knot nematodes Reham M Youssef, Margaret H MacDonald, Eric P Brewer, Gary R Bauchan, Kyung-Hwan Kim, Benjamin F Matthews BMC Plant Biology 2013, 13:67 (25 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed \| Editor’s summary Expression of Arabidopsis PAD4 (PHYTOALEXIN-DEFICIENT4) in soybean roots confers resistance to two different genera of nematodes, highlighting a potential role for defense signaling genes in quantitative disease resistance in this economically important crop.
		Research article Comparative expression profiling of miRNA during anther development in genetic male sterile and wild type cotton Mingming Wei, Hengling Wei, Man Wu, Meizhen Song, Jinfa Zhang, Jiwen Yu, Shuli Fan, Shuxun Yu BMC Plant Biology 2013, 13:66 (19 April 2013) Abstract \| Full text \| PDF \| PubMed

	All
		Correction Correction: Transcriptome analysis of stem development in the tumourous stem mustard Brassica juncea var. tumida Tsen et Lee by RNA sequencing Quan Sun, Guanfan Zhou, Yingfan Cai, Yonghong Fan, Xiaoyan Zhu, Yihua Liu, Xiaohong He, Jinjuan Shen, Huaizhong Jiang, Daiwen Hu, Zheng Pan, Liuxin Xiang, Guanghua He, Daiwen Dong, Jianping Yang BMC Plant Biology 2013, 13:90 (17 June 2013) Abstract \| Provisional PDF
		Research article Analysis of the WUSCHEL-RELATED HOMEOBOX gene family in the conifer picea abies reveals extensive conservation as well as dynamic patterns Harald Hedman, Tianqing Zhu, Sara von Arnold, Joel J Sohlberg BMC Plant Biology 2013, 13:89 (12 June 2013) Abstract \| Provisional PDF \| PubMed
		Research article Identification of stress-responsive genes in Ammopiptanthus mongolicus using ESTs generated from cold- and drought-stressed seedlings Meiqin Liu, Jing Shi, Cunfu Lu BMC Plant Biology 2013, 13:88 (5 June 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article High-throughput genotyping of wheat-barley amphiploids utilising diversity array technology (DArT) Almudena Castillo, María C Ramírez, Azahara C Martín, Andrzej Kilian, Antonio Martín, Sergio G Atienza BMC Plant Biology 2013, 13:87 (3 June 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Endophytic Penicillium funiculosum LHL06 secretes gibberellin that reprograms Glycine max L. growth during copper stress Abdul Khan, In-Jung Lee BMC Plant Biology 2013, 13:86 (31 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Two recently duplicated maize NAC transcription factor paralogs are induced in response to Colletotrichum graminicola infection Anna-Maria Voitsik, Steffen Muench, Holger B Deising, Lars M Voll BMC Plant Biology 2013, 13:85 (29 May 2013) Abstract \| Provisional PDF \| PubMed
		Research article Perturbing the metabolic dynamics of myo-inositol in developing Brassica napus seeds through in vivo methylation impacts its utilization as phytate precursor and affects downstream metabolic pathways Jinzhuo Dong, Wei Yan, Cheryl Bock, Kateryna Nokhrina, Wilf Keller, Fawzy Georges BMC Plant Biology 2013, 13:84 (21 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Database PLANEX: the plant co-expression database Won Yim, Yongbin Yu, Kitae Song, Cheol Jang, Byung-Moo Lee BMC Plant Biology 2013, 13:83 (20 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Methodology article An endogenous artificial microRNA system for unraveling the function of root endosymbioses related genes in Medicago truncatula Emanuel A Devers, Julia Teply, Armin Reinert, Nicole Gaude, Franziska Krajinski BMC Plant Biology 2013, 13:82 (16 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed \| Editor’s summary An artificial microRNA (amiR)-mediated gene silencing system for Medicago truncatula roots sheds light on the function of MtErf1, a putative transcription factor that is strongly induced in arbuscule-containing cells during mycorrhizal symbiosis.
		Database LIPS database with LIPService: a microscopic image database of intracellular structures in Arabidopsis guard cells Takumi Higaki, Natsumaro Kutsuna, Seiichiro Hasezawa BMC Plant Biology 2013, 13:81 (16 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Transcriptome resources and functional characterization of monoterpene synthases for two host species of the mountain pine beetle, lodgepole pine (Pinus contorta) and jack pine (Pinus banksiana) Dawn E Hall, Macaire M S Yuen, Sharon Jancsik, Alfonso Quesada, Harpreet K Dullat, Maria Li, Hannah Henderson, Adriana Arango-Velez, Nancy Y Liao, Roderick T Docking, Simon K Chan, Janice EK Cooke, Colette Breuil, Steven JM Jones, Christopher I Keeling, Jörg Bohlmann BMC Plant Biology 2013, 13:80 (16 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed \| Editor’s summary Generation and quality assessment of assembled transcriptome resources for lodgepole pine and jack pine identifies a number of monoterpene synthase-like genes involved in host defence against insect pests and fungal pathogens.
		Research article The cell morphogenesis ANGUSTIFOLIA (AN) gene, a plant homolog of CtBP/BARS, is involved in abiotic and biotic stress response in higher plants Emma W Gachomo, Jose C Jimenez-Lopez, Sarah R Smith, Anthony B Cooksey, Oteri M Oghoghomeh, Nicholas Johnson, Lamine Baba-Moussa, Simeon O Kotchoni BMC Plant Biology 2013, 13:79 (14 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Genetic characterization of a core collection of flax (Linum usitatissimum L.) suitable for association mapping studies and evidence of divergent selection between fiber and linseed types Braulio J Soto-Cerda, Axel Diederichsen, Raja Ragupathy, Sylvie Cloutier BMC Plant Biology 2013, 13:78 (6 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Tissue culture-induced genetic and epigenetic alterations in rice pure-lines, F1 hybrids and polyploids Xiaoran Wang, Rui Wu, Xiuyun Lin, Yan Bai, Congdi Song, Xiaoming Yu, Chunming Xu, Na Zhao, Yuzhu Dong, Bao Liu BMC Plant Biology 2013, 13:77 (5 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Enhanced resistance to the cellulose biosynthetic inhibitors, thaxtomin A and isoxaben in Arabidopsis thaliana mutants, also provides specific co-resistance to the auxin transport inhibitor, 1-NPA Robert S Tegg, Sergey N Shabala, Tracey A Cuin, Noel W Davies, Calum R Wilson BMC Plant Biology 2013, 13:76 (3 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Phylogeny and a structural model of plant MHX transporters Rachel Gaash, Meirav Elazar, Keren Mizrahi, Meital Avramov-Mor, Irina Berezin, Orit Shaul BMC Plant Biology 2013, 13:75 (2 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Molecular evidence for natural hybridization in the mangrove fern genus Acrostichum Rongshu Zhang, Ting Liu, Wei Wu, Yunqin Li, Lifang Chao, Lishi Huang, Yelin Huang, Suhua Shi, Renchao Zhou BMC Plant Biology 2013, 13:74 (1 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article NaMYC2 transcription factor regulates a subset of plant defense responses in Nicotiana attenuata Melkamu G Woldemariam, Son Truong Dinh, Youngjoo Oh, Emmanuel Gaquerel, Ian T Baldwin, Ivan Galis BMC Plant Biology 2013, 13:73 (1 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Evidence for extensive heterotrophic metabolism, antioxidant action, and associated regulatory events during winter hardening in Sitka spruce Eva Collakova, Curtis Klumas, Haktan Suren, Elijah Myers, Lenwood S Heath, Jason A Holliday, Ruth Grene BMC Plant Biology 2013, 13:72 (30 April 2013) Abstract \| Full text \| PDF \| PubMed
		Methodology article Fast-tracking development of homozygous transgenic cereal lines using a simple and highly flexible real-time PCR assay Jos C Mieog, Crispin A Howitt, Jean-Philippe Ral BMC Plant Biology 2013, 13:71 (30 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Genome-wide identification and functional analyses of calmodulin genes in Solanaceous species Yuan Zhao, Wei Liu, You-Ping Xu, Jia-Yi Cao, Janet Braam, Xin-Zhong Cai BMC Plant Biology 2013, 13:70 (27 April 2013) Abstract \| Provisional PDF \| PubMed
		Research article Silencing of Nicotiana benthamiana Neuroblastoma-Amplified Gene causes ER stress and cell death Jae-Yong Lee, Sujon Sarowar, Hee Seung Kim, Hyeran Kim, Inhwan Hwang, Young Jin Kim, Hyun-Sook Pai BMC Plant Biology 2013, 13:69 (27 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Transcriptional regulation of flavonoid biosynthesis in nectarine (Prunus persica) by a set of R2R3 MYB transcription factors Daniela Ravaglia, Richard V Espley, Rebecca A Henry-Kirk, Carlo Andreotti, Vanina Ziosi, Roger P Hellens, Guglielmo Costa, Andrew C Allan BMC Plant Biology 2013, 13:68 (25 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Ectopic expression of AtPAD4 broadens resistance of soybean to soybean cyst and root-knot nematodes Reham M Youssef, Margaret H MacDonald, Eric P Brewer, Gary R Bauchan, Kyung-Hwan Kim, Benjamin F Matthews BMC Plant Biology 2013, 13:67 (25 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed \| Editor’s summary Expression of Arabidopsis PAD4 (PHYTOALEXIN-DEFICIENT4) in soybean roots confers resistance to two different genera of nematodes, highlighting a potential role for defense signaling genes in quantitative disease resistance in this economically important crop.
		Research article Comparative expression profiling of miRNA during anther development in genetic male sterile and wild type cotton Mingming Wei, Hengling Wei, Man Wu, Meizhen Song, Jinfa Zhang, Jiwen Yu, Shuli Fan, Shuxun Yu BMC Plant Biology 2013, 13:66 (19 April 2013) Abstract \| Full text \| PDF \| PubMed