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		Research article Identification of differences in microRNA transcriptomes between porcine oxidative and glycolytic skeletal muscles Yingkai Liu, Mingzhou Li, Jideng Ma, Jie Zhang, Chaowei Zhou, Tao Wang, Xiaolian Gao, Xuewei Li BMC Molecular Biology 2013, 14:7 (18 February 2013) Abstract \| Provisional PDF \| PubMed
		Methodology article Single cell transcriptomic analysis of prostate cancer cells Christopher J Welty, Ilsa Coleman, Roger Coleman, Bryce Lakely, Jing Xia, Shu Chen, Roman Gulati, Sandy R Larson, Paul H Lange, Bruce Montgomery, Peter S Nelson, Robert L Vessella, Colm Morrissey BMC Molecular Biology 2013, 14:6 (16 February 2013) Abstract \| Provisional PDF \| PubMed
		Research article Multiple tandem splicing silencer elements suppress aberrant splicing within the long exon 26 of the human Apolipoprotein B gene Umasuthan Srirangalingam, Scott A Akker, Dennis Norman, Naveenan Navaratnam, Shern L Chew, Bernard Khoo BMC Molecular Biology 2013, 14:5 (7 February 2013) Abstract \| Provisional PDF \| PubMed
		Research article Identification of a set of miRNAs differentially expressed in transiently TIA-depleted HeLa cells by genome-wide profiling Carmen Sánchez-Jiménez, Isabel Carrascoso, Juan Barrero, José M Izquierdo BMC Molecular Biology 2013, 14:4 (6 February 2013) Abstract \| Provisional PDF \| PubMed
		Research article UtroUp is a novel six zinc finger artificial transcription factor that recognises 18 base pairs of the utrophin promoter and efficiently drives utrophin upregulation Annalisa Onori, Cinzia Pisani, Georgios Strimpakos, Lucia Monaco, Elisabetta Mattei, Claudio Passananti, Nicoletta Corbi BMC Molecular Biology 2013, 14:3 (30 January 2013) Abstract \| Full text \| PDF \| PubMed
		Research article The ICP22 protein selectively modifies the transcription of different kinetic classes of pseudorabies virus genes Irma F Takács, Dóra Tombácz, Beáta Berta, István Prazsák, Nándor Póka, Zsolt Boldogk¿i BMC Molecular Biology 2013, 14:2 (29 January 2013) Abstract \| Provisional PDF \| PubMed
		Research article Drosophila MOF controls Checkpoint protein2 and regulates genomic stability during early embryogenesis Sreerangam NCVL Pushpavalli, Arpita Sarkar, M Janaki Ramaiah, Debabani Roy Chowdhury, Utpal Bhadra, Manika Pal-Bhadra BMC Molecular Biology 2013, 14:1 (24 January 2013) Abstract \| Full text \| PDF \| PubMed
		Research article Alternative splicing of the neurofibromatosis type 1 pre-mRNA is regulated by the muscleblind-like proteins and the CUG-BP and ELAV-like factors Victoria A Fleming, Cuiyu Geng, Andrea N Ladd, Hua Lou BMC Molecular Biology 2012, 13:35 (10 December 2012) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary Muscleblind-like (MBNL) splicing proteins MBNL1 and MBNL2 positively regulate the inclusion of neurofibromatosis type 1 (NF1) exon 23a, and neighboring sequences together with the preferred binding sequence are required for optimal binding in vitro.
		Research article Directional telomeric silencing and lack of canonical B1 elements in two silencer Autonomously Replicating Sequences in S. cerevisiae Patricia Chisamore-Robert, Samantha Peeters, Kristina Shostak, Krassimir Yankulov BMC Molecular Biology 2012, 13:34 (16 November 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Escherichia coli RecG functionally suppresses human Bloom syndrome phenotypes Michael W Killen, Dawn M Stults, William A Wilson, Andrew J Pierce BMC Molecular Biology 2012, 13:33 (30 October 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Cloning, ligand-binding, and temporal expression of ecdysteroid receptors in the diamondback moth, Plutella xylostella Baozhen Tang, Wei Dong, Pei Liang, Xuguo Zhou, Xiwu Gao BMC Molecular Biology 2012, 13:32 (19 October 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Adenylate kinase 2 (AK2) promotes cell proliferation in insect development Ru-Ping Chen, Chun-Yan Liu, Hong-Lian Shao, Wei-Wei Zheng, Jin-Xing Wang, Xiao-Fan Zhao BMC Molecular Biology 2012, 13:31 (28 September 2012) Abstract \| Full text \| PDF \| PubMed
		Methodology article A MultiSite Gateway^TMvector set for the functional analysis of genes in the model Saccharomyces cerevisiae Astrid Nagels Durand, Tessa Moses, Rebecca De Clercq, Alain Goossens, Laurens Pauwels BMC Molecular Biology 2012, 13:30 (20 September 2012) Abstract \| Full text \| PDF \| PubMed
		Research article A novel 3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMGCR) splice variant with an alternative exon 1 potentially encoding an extended N-terminus Camilla Stormo, Marianne K Kringen, Runa M Grimholt, Jens P Berg, Armin P Piehler BMC Molecular Biology 2012, 13:29 (18 September 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Regulation of GAD65 expression by SMAR1 and p53 upon Streptozotocin treatment Sandeep Singh, Varsheish Raina, Pavithra Chavali, Taronish Dubash, Sreenath Kadreppa, Pradeep Parab, Samit Chattopadhyay BMC Molecular Biology 2012, 13:28 (14 September 2012) Abstract \| Full text \| PDF \| PubMed \| 1 comment
		Research article Clock-controlled mir-142-3p can target its activator, Bmal1 Xiaochao Tan, Peng Zhang, Lan Zhou, Bin Yin, Hui Pan, Xiaozhong Peng BMC Molecular Biology 2012, 13:27 (7 September 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Structural/functional analysis of the human OXR1 protein: identification of exon 8 as the anti-oxidant encoding function Kenan C Murphy, Michael R Volkert BMC Molecular Biology 2012, 13:26 (8 August 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Dual regulation of P-glycoprotein expression by Trichostatin A in cancer cell lines Trinidad Balaguer, Angeles Gómez-Martínez, Pilar García-Morales, Javier Lacueva, Rafael Calpena, Lourdes Reverte, Natividad Riquelme, Isabel Martinez-Lacaci, José A Ferragut, Miguel Saceda BMC Molecular Biology 2012, 13:25 (30 July 2012) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary Histone deacetylase inhibitors (iHDACs) increase expression of P-glycoprotein (Pgp) mRNA in cancer cell lines, however this is not reflected by an accompanying increase in protein levels, suggesting that alteration of mRNA levels is clinically irrelevant.
		Research article Structure-function analysis of Methanobacterium thermoautotrophicum RNA ligase – engineering a thermostable ATP independent enzyme Alexander M Zhelkovsky, Larry A McReynolds BMC Molecular Biology 2012, 13:24 (18 July 2012) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary Mutation of a single amino acid residue in the Methanobacterium thermoautotrophicum RNA ligase results in ATP-independent ligase activity at high temperatures, suggesting that this RNA ligase could be a useful tool for RNA ligation experiments.
		Research article G-quadruplex recognition activities of E. Coli MutS Edward A Ehrat, Bradley R Johnson, Jonathan D Williams, Glen M Borchert, Erik D Larson BMC Molecular Biology 2012, 13:23 (2 July 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Evaluation of reference genes for real-time quantitative PCR studies in Candida glabrata following azole treatment Qingdi Li, Jeff Skinner, John E Bennett BMC Molecular Biology 2012, 13:22 (29 June 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Interaction of C/EBP-beta and NF-Y factors constrains activity levels of the nutritionally controlled promoter IA expressing the acetyl-CoA carboxylase-alpha gene in cattle Xuanming Shi, Cornelia C Metges, Hans-Martin Seyfert BMC Molecular Biology 2012, 13:21 (27 June 2012) Abstract \| Full text \| PDF \| PubMed
		Research article SPRR2A enhances p53 deacetylation through HDAC1 and down regulates p21 promoter activity Yoshiaki Mizuguchi, Susan Specht, John G Lunz, Kumiko Isse, Natasha Corbitt, Toshihiro Takizawa, Anthony J Demetris BMC Molecular Biology 2012, 13:20 (25 June 2012) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary Up-regulation of the skin cross-linking protein SPRR2A (small proline rich protein 2A) in cholangiocarcinoma cells reduces p53 acetylation and increases histone deacetylase 1 expression, suggesting that SPRR2A overexpression may inihibit p53-dependent transcriptional activity during wound repair.
		Research article The Saccharomyces cerevisiae Hot1p regulated gene YHR087W (HGI1) has a role in translation upon high glucose concentration stress M Gomar-Alba, E Jiménez-Martí, M del Olmo BMC Molecular Biology 2012, 13:19 (21 June 2012) Abstract \| Full text \| PDF \| PubMed
		Research article PIM-1 kinase interacts with the DNA binding domain of the vitamin D receptor: a further kinase implicated in 1,25-(OH)₂D₃ signaling Christina J Maier, Richard H Maier, Raphaela Rid, Andrea Trost, Harald Hundsberger, Andreas Eger, Helmut Hintner, Johann W Bauer, Kamil Onder BMC Molecular Biology 2012, 13:18 (21 June 2012) Abstract \| Full text \| PDF \| PubMed

	All
		Research article Identification of differences in microRNA transcriptomes between porcine oxidative and glycolytic skeletal muscles Yingkai Liu, Mingzhou Li, Jideng Ma, Jie Zhang, Chaowei Zhou, Tao Wang, Xiaolian Gao, Xuewei Li BMC Molecular Biology 2013, 14:7 (18 February 2013) Abstract \| Provisional PDF \| PubMed
		Methodology article Single cell transcriptomic analysis of prostate cancer cells Christopher J Welty, Ilsa Coleman, Roger Coleman, Bryce Lakely, Jing Xia, Shu Chen, Roman Gulati, Sandy R Larson, Paul H Lange, Bruce Montgomery, Peter S Nelson, Robert L Vessella, Colm Morrissey BMC Molecular Biology 2013, 14:6 (16 February 2013) Abstract \| Provisional PDF \| PubMed
		Research article Multiple tandem splicing silencer elements suppress aberrant splicing within the long exon 26 of the human Apolipoprotein B gene Umasuthan Srirangalingam, Scott A Akker, Dennis Norman, Naveenan Navaratnam, Shern L Chew, Bernard Khoo BMC Molecular Biology 2013, 14:5 (7 February 2013) Abstract \| Provisional PDF \| PubMed
		Research article Identification of a set of miRNAs differentially expressed in transiently TIA-depleted HeLa cells by genome-wide profiling Carmen Sánchez-Jiménez, Isabel Carrascoso, Juan Barrero, José M Izquierdo BMC Molecular Biology 2013, 14:4 (6 February 2013) Abstract \| Provisional PDF \| PubMed
		Research article UtroUp is a novel six zinc finger artificial transcription factor that recognises 18 base pairs of the utrophin promoter and efficiently drives utrophin upregulation Annalisa Onori, Cinzia Pisani, Georgios Strimpakos, Lucia Monaco, Elisabetta Mattei, Claudio Passananti, Nicoletta Corbi BMC Molecular Biology 2013, 14:3 (30 January 2013) Abstract \| Full text \| PDF \| PubMed
		Research article The ICP22 protein selectively modifies the transcription of different kinetic classes of pseudorabies virus genes Irma F Takács, Dóra Tombácz, Beáta Berta, István Prazsák, Nándor Póka, Zsolt Boldogk¿i BMC Molecular Biology 2013, 14:2 (29 January 2013) Abstract \| Provisional PDF \| PubMed
		Research article Drosophila MOF controls Checkpoint protein2 and regulates genomic stability during early embryogenesis Sreerangam NCVL Pushpavalli, Arpita Sarkar, M Janaki Ramaiah, Debabani Roy Chowdhury, Utpal Bhadra, Manika Pal-Bhadra BMC Molecular Biology 2013, 14:1 (24 January 2013) Abstract \| Full text \| PDF \| PubMed
		Research article Alternative splicing of the neurofibromatosis type 1 pre-mRNA is regulated by the muscleblind-like proteins and the CUG-BP and ELAV-like factors Victoria A Fleming, Cuiyu Geng, Andrea N Ladd, Hua Lou BMC Molecular Biology 2012, 13:35 (10 December 2012) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary Muscleblind-like (MBNL) splicing proteins MBNL1 and MBNL2 positively regulate the inclusion of neurofibromatosis type 1 (NF1) exon 23a, and neighboring sequences together with the preferred binding sequence are required for optimal binding in vitro.
		Research article Directional telomeric silencing and lack of canonical B1 elements in two silencer Autonomously Replicating Sequences in S. cerevisiae Patricia Chisamore-Robert, Samantha Peeters, Kristina Shostak, Krassimir Yankulov BMC Molecular Biology 2012, 13:34 (16 November 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Escherichia coli RecG functionally suppresses human Bloom syndrome phenotypes Michael W Killen, Dawn M Stults, William A Wilson, Andrew J Pierce BMC Molecular Biology 2012, 13:33 (30 October 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Cloning, ligand-binding, and temporal expression of ecdysteroid receptors in the diamondback moth, Plutella xylostella Baozhen Tang, Wei Dong, Pei Liang, Xuguo Zhou, Xiwu Gao BMC Molecular Biology 2012, 13:32 (19 October 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Adenylate kinase 2 (AK2) promotes cell proliferation in insect development Ru-Ping Chen, Chun-Yan Liu, Hong-Lian Shao, Wei-Wei Zheng, Jin-Xing Wang, Xiao-Fan Zhao BMC Molecular Biology 2012, 13:31 (28 September 2012) Abstract \| Full text \| PDF \| PubMed
		Methodology article A MultiSite Gateway^TMvector set for the functional analysis of genes in the model Saccharomyces cerevisiae Astrid Nagels Durand, Tessa Moses, Rebecca De Clercq, Alain Goossens, Laurens Pauwels BMC Molecular Biology 2012, 13:30 (20 September 2012) Abstract \| Full text \| PDF \| PubMed
		Research article A novel 3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMGCR) splice variant with an alternative exon 1 potentially encoding an extended N-terminus Camilla Stormo, Marianne K Kringen, Runa M Grimholt, Jens P Berg, Armin P Piehler BMC Molecular Biology 2012, 13:29 (18 September 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Regulation of GAD65 expression by SMAR1 and p53 upon Streptozotocin treatment Sandeep Singh, Varsheish Raina, Pavithra Chavali, Taronish Dubash, Sreenath Kadreppa, Pradeep Parab, Samit Chattopadhyay BMC Molecular Biology 2012, 13:28 (14 September 2012) Abstract \| Full text \| PDF \| PubMed \| 1 comment
		Research article Clock-controlled mir-142-3p can target its activator, Bmal1 Xiaochao Tan, Peng Zhang, Lan Zhou, Bin Yin, Hui Pan, Xiaozhong Peng BMC Molecular Biology 2012, 13:27 (7 September 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Structural/functional analysis of the human OXR1 protein: identification of exon 8 as the anti-oxidant encoding function Kenan C Murphy, Michael R Volkert BMC Molecular Biology 2012, 13:26 (8 August 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Dual regulation of P-glycoprotein expression by Trichostatin A in cancer cell lines Trinidad Balaguer, Angeles Gómez-Martínez, Pilar García-Morales, Javier Lacueva, Rafael Calpena, Lourdes Reverte, Natividad Riquelme, Isabel Martinez-Lacaci, José A Ferragut, Miguel Saceda BMC Molecular Biology 2012, 13:25 (30 July 2012) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary Histone deacetylase inhibitors (iHDACs) increase expression of P-glycoprotein (Pgp) mRNA in cancer cell lines, however this is not reflected by an accompanying increase in protein levels, suggesting that alteration of mRNA levels is clinically irrelevant.
		Research article Structure-function analysis of Methanobacterium thermoautotrophicum RNA ligase – engineering a thermostable ATP independent enzyme Alexander M Zhelkovsky, Larry A McReynolds BMC Molecular Biology 2012, 13:24 (18 July 2012) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary Mutation of a single amino acid residue in the Methanobacterium thermoautotrophicum RNA ligase results in ATP-independent ligase activity at high temperatures, suggesting that this RNA ligase could be a useful tool for RNA ligation experiments.
		Research article G-quadruplex recognition activities of E. Coli MutS Edward A Ehrat, Bradley R Johnson, Jonathan D Williams, Glen M Borchert, Erik D Larson BMC Molecular Biology 2012, 13:23 (2 July 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Evaluation of reference genes for real-time quantitative PCR studies in Candida glabrata following azole treatment Qingdi Li, Jeff Skinner, John E Bennett BMC Molecular Biology 2012, 13:22 (29 June 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Interaction of C/EBP-beta and NF-Y factors constrains activity levels of the nutritionally controlled promoter IA expressing the acetyl-CoA carboxylase-alpha gene in cattle Xuanming Shi, Cornelia C Metges, Hans-Martin Seyfert BMC Molecular Biology 2012, 13:21 (27 June 2012) Abstract \| Full text \| PDF \| PubMed
		Research article SPRR2A enhances p53 deacetylation through HDAC1 and down regulates p21 promoter activity Yoshiaki Mizuguchi, Susan Specht, John G Lunz, Kumiko Isse, Natasha Corbitt, Toshihiro Takizawa, Anthony J Demetris BMC Molecular Biology 2012, 13:20 (25 June 2012) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary Up-regulation of the skin cross-linking protein SPRR2A (small proline rich protein 2A) in cholangiocarcinoma cells reduces p53 acetylation and increases histone deacetylase 1 expression, suggesting that SPRR2A overexpression may inihibit p53-dependent transcriptional activity during wound repair.
		Research article The Saccharomyces cerevisiae Hot1p regulated gene YHR087W (HGI1) has a role in translation upon high glucose concentration stress M Gomar-Alba, E Jiménez-Martí, M del Olmo BMC Molecular Biology 2012, 13:19 (21 June 2012) Abstract \| Full text \| PDF \| PubMed
		Research article PIM-1 kinase interacts with the DNA binding domain of the vitamin D receptor: a further kinase implicated in 1,25-(OH)₂D₃ signaling Christina J Maier, Richard H Maier, Raphaela Rid, Andrea Trost, Harald Hundsberger, Andreas Eger, Helmut Hintner, Johann W Bauer, Kamil Onder BMC Molecular Biology 2012, 13:18 (21 June 2012) Abstract \| Full text \| PDF \| PubMed