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1.
1715 Accesses
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Protein secretion systems in bacterial-host associations, and their description in the Gene Ontology
Tsai-Tien Tseng, Brett M Tyler, João C Setubal BMC Microbiology 2009, 9(Suppl 1):S2 (19 February 2009)
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2.
1009 Accesses
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Comprehensive annotation of secondary metabolite biosynthetic genes and gene clusters of Aspergillus nidulans, A. fumigatus, A. niger and A. oryzae
Diane O Inglis, Jonathan Binkley, Marek S Skrzypek, Martha B Arnaud, Gustavo C Cerqueira, Prachi Shah, Farrell Wymore, Jennifer R Wortman, Gavin Sherlock BMC Microbiology 2013, 13:91 (26 April 2013)
Abstract | Provisional PDF
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3.
996 Accesses
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The Firmicutes/Bacteroidetes ratio of the human microbiota changes with age
D Mariat, O Firmesse, F Levenez, VD Guimarăes, H Sokol, J Doré, G Corthier, J-P Furet BMC Microbiology 2009, 9:123 (9 June 2009)
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4.
970 Accesses
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Development of real-time PCR for detection of Mycoplasma hominis
Agata Baczynska, Helle F Svenstrup, Jens Fedder, Svend Birkelund, Gunna Christiansen BMC Microbiology 2004, 4:35 (6 September 2004)
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5.
910 Accesses
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Brucella 'HOOF-Prints': strain typing by multi-locus analysis of variable number tandem repeats (VNTRs)
Betsy J Bricker, Darla R Ewalt, Shirley M Halling BMC Microbiology 2003, 3:15 (11 July 2003)
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Editor’s summary
A new technique enables different isolates of Brucella to be identified by their 'hypervariable octameric oligonucleotide finger-prints' and will aid epidemiological studies on the origin of Brucella outbreaks in livestock.
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6.
890 Accesses
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MLVA genotyping of Chinese human Brucella melitensis biovar 1, 2 and 3 isolates
Hai Jiang, Mengguang Fan, Jingdiao Chen, Jingchuan Mi, Ruiping Yu, Hongyan Zhao, Dongri Piao, Changwen Ke, Xiaoling Deng, Guozhong Tian, Buyun Cui BMC Microbiology 2011, 11:256 (22 November 2011)
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7.
864 Accesses
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Analysis of a unique Clostridium botulinum strain from the Southern hemisphere producing a novel type E botulinum neurotoxin subtype
Brian H Raphael, Matthew Lautenschlager, Suzanne R Kalb, Laura I T de Jong, Michael Frace, Carolina Lúquez, John R Barr, Rafael A Fernández, Susan E Maslanka BMC Microbiology 2012, 12:245 (31 October 2012)
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8.
855 Accesses
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Colonization strategies of Pseudomonas fluorescens Pf0-1: activation of soil-specific genes important for diverse and specific environments
Katila Varivarn, Lindsey A Champa, Mark W Silby, Eduardo A Robleto BMC Microbiology 2013, 13:92 (27 April 2013)
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9.
837 Accesses
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A proteomic investigation of Fusobacterium nucleatum alkaline-induced biofilms
Jactty Chew, Peter S Zilm, Janet M Fuss, Neville J Gully BMC Microbiology 2012, 12:189 (3 September 2012)
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10.
813 Accesses
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Diffusely adherent Escherichia coli strains isolated from children and adults constitute two different populations
Rosane Mansan-Almeida, Alex Pereira, Loreny Giugliano BMC Microbiology 2013, 13:22 (1 February 2013)
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11.
801 Accesses
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Toxicity of unsaturated fatty acids to the biohydrogenating ruminal bacterium, Butyrivibrio fibrisolvens
Margarida RG Maia, Lal C Chaudhary, Charles S Bestwick, Anthony J Richardson, Nest McKain, Tony R Larson, Ian A Graham, Robert J Wallace BMC Microbiology 2010, 10:52 (18 February 2010)
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12.
798 Accesses
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Shewanella oneidensis Hfq promotes exponential phase growth, stationary phase culture density, and cell survival
Christopher M Brennan, Meghan L Keane, Taylor M Hunt, Matthew T Goulet, Nicholas Q Mazzucca, Zachary Sexton, Taylor Mezoian, Katherine E Douglas, Jessica M Osborn, Brett J Pellock BMC Microbiology 2013, 13:33 (8 February 2013)
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Editor’s summary
Deletion of hfq, an RNA chaperone protein, in Shewanella oneidensis results in reduced growth rate and productivity of aerobic and anaerobic cultures, and compromises the bacterium’s metal-reduction capability potentially due to an increased sensitivity to oxidative stress.
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13.
744 Accesses
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Fast immunosensing technique to detect Legionella pneumophila in different natural and anthropogenic environments: comparative and collaborative trials
Begoña Bedrina, Sonia Macián, Inmaculada Solís, Roberto Fernández-Lafuente, Eva Baldrich, Guillermo Rodríguez BMC Microbiology 2013, 13:88 (22 April 2013)
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14.
738 Accesses
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Fungal-specific PCR primers developed for analysis of the ITS region of environmental DNA extracts
Kendall J Martin, Paul T Rygiewicz BMC Microbiology 2005, 5:28 (18 May 2005)
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15.
725 Accesses
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Characterization of a salt-induced DhAHP, a gene coding for alkyl hydroperoxide reductase, from the extremely halophilic yeast Debaryomyces hansenii
Hsiu-fung Chao, Yung-fu Yen, Maurice SB Ku BMC Microbiology 2009, 9:182 (28 August 2009)
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16.
724 Accesses
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Antibacterial activities of almond skins on cagA-positive and-negative clinical isolates of Helicobacter pylori
Carlo Bisignano, Angela Filocamo, Erminia La Camera, Sebastiana Zummo, Maria Fera, Giuseppina Mandalari BMC Microbiology 2013, 13:103 (9 May 2013)
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17.
718 Accesses
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Characterization of a variant vlhA gene of Mycoplasma synoviae, strain WVU 1853, with a highly divergent haemagglutinin region
Awatef Béjaoui Khiari, Ibtissem Guériri, Radhia Ben Mohammed, Boutheina Ben Abdelmoumen Mardassi BMC Microbiology 2010, 10:6 (12 January 2010)
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18.
716 Accesses
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Assessment of bacterial diversity during composting of agricultural byproducts
Piyush Chandna, Lata Nain, Surender Singh, Ramesh Chander Kuhad BMC Microbiology 2013, 13:99 (7 May 2013)
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19.
704 Accesses
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Rapid plasmid replicon typing by real time PCR melting curve analysis
Maikel Boot, Susanne Raadsen, Paul HM Savelkoul, Christina Vandenbroucke-Grauls BMC Microbiology 2013, 13:83 (15 April 2013)
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20.
693 Accesses
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Factors associated with the isolation of Nontuberculous mycobacteria (NTM) from a large municipal water system in Brisbane, Australia
Rachel M Thomson, Robyn Carter, Carla Tolson, Chris Coulter, Flavia Huygens, Megan Hargreaves BMC Microbiology 2013, 13:89 (22 April 2013)
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21.
675 Accesses
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Microarray analysis reveals marked intestinal microbiota aberrancy in infants having eczema compared to healthy children in at-risk for atopic disease
Lotta Nylund, Reetta Satokari, Janne Nikkilä, Mirjana Rajilić-Stojanović, Marko Kalliomäki, Erika Isolauri, Seppo Salminen, Willem M de Vos BMC Microbiology 2013, 13:12 (23 January 2013)
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Editor’s summary
Children with eczema harbour a greater diversity of microbes in the gut than those without, including an increased abundance of bacteria that are typically more common in adults, which may contribute to the perpetuation of the condition.
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22.
640 Accesses
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Sampling and pyrosequencing methods for characterizing bacterial communities in the human gut using 16S sequence tags
Gary D Wu, James D Lewis, Christian Hoffmann, Ying-Yu Chen, Rob Knight, Kyle Bittinger, Jennifer Hwang, Jun Chen, Ronald Berkowsky, Lisa Nessel, Hongzhe Li, Frederic D Bushman BMC Microbiology 2010, 10:206 (30 July 2010)
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23.
626 Accesses
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Phylogeography of Francisella tularensis subspecies holarctica from the country of Georgia
Gvantsa Chanturia, Dawn N Birdsell, Merab Kekelidze, Ekaterine Zhgenti, George Babuadze, Nikoloz Tsertsvadze, Shota Tsanava, Paata Imnadze, Stephen M Beckstrom-Sternberg, James S Beckstrom-Sternberg, Mia D Champion, Shripad Sinari, Miklos Gyuranecz, Jason Farlow, Amanda H Pettus, Emily L Kaufman, Joseph D Busch, Talima Pearson, Jeffrey T Foster, Amy J Vogler, David M Wagner, Paul Keim BMC Microbiology 2011, 11:139 (17 June 2011)
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24.
608 Accesses
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Influence of arthritis-related protein (BBF01) on infectivity of Borrelia burgdorferi B31
Denise Imai, Kevin Holden, Eric M Velazquez, Sunlian Feng, Emir Hodzic, Stephen W Barthold BMC Microbiology 2013, 13:100 (7 May 2013)
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25.
607 Accesses
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Effect of avian influenza A H5N1 infection on the expression of microRNA-141 in human respiratory epithelial cells
Wai-Yip Lam, Apple Chung-Man Yeung, Karry Lei-Ka Ngai, Man-Shan Li, Ka-Fai To, Stephen Kwok-Wing Tsui, Paul Kay-Sheung Chan BMC Microbiology 2013, 13:104 (10 May 2013)
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26.
605 Accesses
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Impact of agr dysfunction on virulence profiles and infections associated with a novel methicillin-resistant Staphylococcus aureus (MRSA) variant of the lineage ST1-SCCmec IV
Fabienne Antunes Ferreira, Raquel Rodrigues Souza, Bruno de Sousa Moraes, Ana Maria de Amorim Ferreira, Marco Antônio Américo, Sérgio Eduardo Longo Fracalanzza, José Nelson dos Santos Silva Couceiro, Agnes Marie Sá Figueiredo BMC Microbiology 2013, 13:93 (27 April 2013)
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27.
604 Accesses
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The effect of environmental conditions on expression of Bacteroides fragilis and Bacteroides thetaiotaomicron C10 protease genes
Roibeard F Thornton, Elizabeth C Murphy, Todd F Kagawa, Paul W O’Toole, Jakki C Cooney BMC Microbiology 2012, 12:190 (3 September 2012)
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28.
595 Accesses
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Adaptive response to starvation in the fish pathogen Flavobacterium columnare: cell viability and ultrastructural changes
Covadonga R Arias, Stacey LaFrentz, Wenlong Cai, Oscar Olivares-Fuster BMC Microbiology 2012, 12:266 (19 November 2012)
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29.
594 Accesses
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A functional VipA-VipB interaction is required for the type VI secretion system activity of Vibrio cholerae O1 strain A1552
Jeanette E Bröms, Takahiko Ishikawa, Sun N Wai, Anders Sjöstedt BMC Microbiology 2013, 13:96 (3 May 2013)
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30.
588 Accesses
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Tyrosine-containing peptides are precursors of tyramine produced by Lactobacillus plantarum strain IR BL0076 isolated from wine
Maryse Bonnin-Jusserand, Cosette Grandvalet, Aurélie Rieu, Stéphanie Weidmann, Hervé Alexandre BMC Microbiology 2012, 12:199 (11 September 2012)
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31.
573 Accesses
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TypA is involved in virulence, antimicrobial resistance and biofilm formation in Pseudomonas aeruginosa
Anke Neidig, Amy TY Yeung, Thibaut Rosay, Beatrix Tettmann, Nikola Strempel, Martina Rueger, Olivier Lesouhaitier, Joerg Overhage BMC Microbiology 2013, 13:77 (9 April 2013)
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32.
568 Accesses
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Coverage evaluation of universal bacterial primers using the metagenomic datasets
Dan-Ping Mao, Quan Zhou, Chong-Yu Chen, Zhe-Xue Quan BMC Microbiology 2012, 12:66 (3 May 2012)
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33.
562 Accesses
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Molecular analysis of non-O1/non-O139 Vibrio cholerae isolated from hospitalised patients in China
Yun Luo, Julian Ye, Dazhi Jin, Gangqiang Ding, Zheng Zhang, Lingling Mei, Sophie Octavia, Ruiting Lan BMC Microbiology 2013, 13:52 (4 March 2013)
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34.
524 Accesses
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Genomes-based phylogeny of the genus Xanthomonas
Luis M Rodriguez-R, Alejandro Grajales, Mario L Arrieta-Ortiz, Camilo Salazar, Silvia Restrepo, Adriana Bernal BMC Microbiology 2012, 12:43 (23 March 2012)
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35.
522 Accesses
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Antiadhesive activity of the biosurfactant pseudofactin II secreted by the Arctic bacterium Pseudomonas fluorescens BD5
Tomasz Janek, Marcin Łukaszewicz, Anna Krasowska BMC Microbiology 2012, 12:24 (23 February 2012)
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36.
512 Accesses
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Comparative genome analysis of an avirulent and two virulent strains of avian Pasteurella multocida reveals candidate genes involved in fitness and pathogenicity
Timothy J Johnson, Juan E Abrahante, Samuel S Hunter, Melissa Hauglund, Fred M Tatum, Samuel K Maheswaran, Robert E Briggs BMC Microbiology 2013, 13:106 (14 May 2013)
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37.
501 Accesses
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Influence of internalin a murinisation on host resistance to orally acquired listeriosis in mice
Silke Bergmann, Philippa M Beard, Bastian Pasche, Stefan Lienenklaus, Siegfried Weiss, Cormac G M Gahan, Klaus Schughart, Andreas Lengeling BMC Microbiology 2013, 13:90 (23 April 2013)
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Editor’s summary
Listeria monocytogenes modified to express a mutant internalin A, that interacts with murine E-cadherin, are able to efficiently cross the intestinal- but not the blood-brain barrier in mice suggesting different molecular mechanisms for these processes.
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38.
502 Accesses
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Putative SF2 helicases of the early-branching eukaryote Giardia lamblia are involved in antigenic variation and parasite differentiation into cysts
Pablo R Gargantini, Marianela C Serradell, Alessandro Torri, Hugo D Lujan BMC Microbiology 2012, 12:284 (28 November 2012)
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Editor’s summary
The Giardia lamblia genome contains many RNA helicases that appear to have a role during both antigenic variation and encystation of the parasite although none have significant homology with the RNA helicase domain of Dicer enzymes.
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39.
488 Accesses
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Cultivation conditions and the diffusion of oxygen into culture media: The rationale for the flask-to-medium ratio in microbiology
Greg A Somerville, Richard A Proctor BMC Microbiology 2013, 13:9 (16 January 2013)
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Editor’s summary
As laboratory technology increases in sophistication Greg Somerville and Richard Proctor highlight the importance of considering all bacterial culture conditions, such as the flask-to-medium ratio, when designing experiments, to ensure accuracy in the reporting of results.
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40.
469 Accesses
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ITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases
Eva Bellemain, Tor Carlsen, Christian Brochmann, Eric Coissac, Pierre Taberlet, Håvard Kauserud BMC Microbiology 2010, 10:189 (9 July 2010)
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41.
470 Accesses
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Molecular analysis of volatile metabolites released specifically by staphylococcus aureus and pseudomonas aeruginosa
Wojciech Filipiak, Andreas Sponring, Maria Baur, Anna Filipiak, Clemens Ager, Helmut Wiesenhofer, Markus Nagl, Jakob Troppmair, Anton Amann BMC Microbiology 2012, 12:113 (20 June 2012)
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42.
468 Accesses
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Identification of Burkholderia mallei and Burkholderia pseudomallei adhesins for human respiratory epithelial cells
Rachel Balder, Serena Lipski, John J Lazarus, William Grose, Ronald M Wooten, Robert J Hogan, Donald E Woods, Eric R Lafontaine BMC Microbiology 2010, 10:250 (28 September 2010)
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43.
468 Accesses
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Development of Loop-Mediated Isothermal Amplification (LAMP) Assays for Rapid Detection of Ehrlichia ruminantium
Ryo Nakao, Ellen Y Stromdahl, Joseph W Magona, Bonto Faburay, Boniface Namangala, Imna Malele, Noboru Inoue, Dirk Geysen, Kiichi Kajino, Frans Jongejan, Chihiro Sugimoto BMC Microbiology 2010, 10:296 (19 November 2010)
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44.
466 Accesses
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Comparative genotypic and pathogenic examination of Campylobacter concisus isolates from diarrheic and non-diarrheic humans
Lisa D Kalischuk, G Douglas Inglis BMC Microbiology 2011, 11:53 (15 March 2011)
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45.
463 Accesses
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Acid stress response and protein induction in Campylobacter jejuni isolates with different acid tolerance
Tina Birk, Monica Wik, René Lametsch, Susanne Knøchel BMC Microbiology 2012, 12:174 (13 August 2012)
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46.
461 Accesses
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Human Streptococcus agalactiae strains in aquatic mammals and fish
Christian MJ Delannoy, Margaret Crumlish, Michael C Fontaine, Jolinda Pollock, Geoff Foster, Mark P Dagleish, James F Turnbull, Ruth N Zadoks BMC Microbiology 2013, 13:41 (18 February 2013)
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47.
459 Accesses
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Evaluation of five DNA extraction methods for purification of DNA from atherosclerotic tissue and estimation of prevalence of Chlamydia pneumoniae in tissue from a Danish population undergoing vascular repair
Tina Mygind, Lars Østergaard, Svend Birkelund, Jes S Lindholt, Gunna Christiansen BMC Microbiology 2003, 3:19 (2 September 2003)
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48.
457 Accesses
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Lactobacillus plantarum (VR1) isolated from an Ayurvedic medicine (Kutajarista) ameliorates in vitro cellular damage caused by Aeromonas veronii
Himanshu Kumar, Ashraf Y Rangrez, Kannayakanahalli M Dayananda, Ashwini N Atre, Milind S Patole, Yogesh S Shouche BMC Microbiology 2011, 11:152 (27 June 2011)
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49.
452 Accesses
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Diversity of endophytic fungi and screening of fungal paclitaxel producer from Anglojap yew, Taxus x media
Zhi-Qiang Xiong, Ying-Ying Yang, Na Zhao, Yong Wang BMC Microbiology 2013, 13:71 (28 March 2013)
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50.
453 Accesses
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The liposoluble proteome of Mycoplasma agalactiae: an insight into the minimal protein complement of a bacterial membrane
Carla Cacciotto, Maria Addis, Daniela Pagnozzi, Bernardo Chessa, Elisabetta Coradduzza, Laura Carcangiu, Sergio Uzzau, Alberto Alberti, Marco Pittau BMC Microbiology 2010, 10:225 (25 August 2010)
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