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1.

Methodology article   Open Access Highly Accessed

A method for high throughput determination of viable bacteria cell counts in 96-well plates

Ronen Hazan, Yok-Ai Que, Damien Maura, Laurence G Rahme BMC Microbiology 2012, 12:259 (13 November 2012)

Abstract | Full text | PDF | PubMed

2.

Research article   Open Access Highly Accessed

Microarray analysis reveals marked intestinal microbiota aberrancy in infants having eczema compared to healthy children in at-risk for atopic disease

Lotta Nylund, Reetta Satokari, Janne Nikkilä, Mirjana Rajilić-Stojanović, Marko Kalliomäki, Erika Isolauri, Seppo Salminen, Willem M de Vos BMC Microbiology 2013, 13:12 (23 January 2013)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

Children with eczema harbour a greater diversity of microbes in the gut than those without, including an increased abundance of bacteria that are typically more common in adults, which may contribute to the perpetuation of the condition.

3.

Research article   Open Access Highly Accessed

Evaluation of the bacterial diversity in the feces of cattle using 16S rDNA bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP)

Scot E Dowd, Todd R Callaway, Randall D Wolcott, Yan Sun, Trevor McKeehan, Robert G Hagevoort, Thomas S Edrington BMC Microbiology 2008, 8:125 (24 July 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

4.

Methodology article   Open Access Highly Accessed

A novel method for screening beta-glucosidase inhibitors

Sony Pandey, Ayinampudi Sree, Soumya S Dash, Dipti P Sethi BMC Microbiology 2013, 13:55 (8 March 2013)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

5.

Research article   Open Access Highly Accessed

Biochemical characterization of an anti-Candida factor produced by Enterococcus faecalis

Raeesh M Shekh, Utpal Roy BMC Microbiology 2012, 12:132 (4 July 2012)

Abstract | Full text | PDF | PubMed

6.

Research article   Open Access Highly Accessed

Storage conditions of intestinal microbiota matter in metagenomic analysis

Silvia Cardona, Anat Eck, Montserrat Cassellas, Milagros Gallart, Carmen Alastrue, Joel Dore, Fernando Azpiroz, Joaquim Roca, Francisco Guarner, Chaysavanh Manichanh BMC Microbiology 2012, 12:158 (30 July 2012)

Abstract | Full text | PDF | PubMed

7.

Research article   Open Access Highly Accessed

Unbalance of intestinal microbiota in atopic children

Marco Candela, Simone Rampelli, Silvia Turroni, Marco Severgnini, Clarissa Consolandi, Gianluca De Bellis, Riccardo Masetti, Giampaolo Ricci, Andrea Pession, Patrizia Brigidi BMC Microbiology 2012, 12:95 (6 June 2012)

Abstract | Full text | PDF | PubMed

8.

Research article   Open Access Highly Accessed

Antimicrobial activity, antibiotic susceptibility and virulence factors of Lactic Acid Bacteria of aquatic origin intended for use as probiotics in aquaculture

Estefanía Muñoz-Atienza, Beatriz Gómez-Sala, Carlos Araújo, Cristina Campanero, Rosa del Campo, Pablo E Hernández, Carmen Herranz, Luis M Cintas BMC Microbiology 2013, 13:15 (24 January 2013)

Abstract | Full text | PDF | PubMed

9.

Research article   Open Access

The Madagascar hissing cockroach as a novel surrogate host for Burkholderia pseudomallei, B. mallei and B. thailandensis

Nathan A Fisher, Wilson J Ribot, Willard Applefeld, David DeShazer BMC Microbiology 2012, 12:117 (22 June 2012)

Abstract | Full text | PDF | PubMed

10.

Research article   Open Access Highly Accessed

Rice bacterial blight pathogen Xanthomonas oryzae pv. oryzae produces multiple DSF-family signals in regulation of virulence factor production

Ya-Wen He, Ji'en Wu, Jae-Soon Cha, Lian-Hui Zhang BMC Microbiology 2010, 10:187 (9 July 2010)

Abstract | Full text | PDF | PubMed

11.

Research article   Open Access Highly Accessed

Environmental distribution of prokaryotic taxa

Javier Tamames, Juan Abellán, Miguel Pignatelli, Antonio Camacho, Andrés Moya BMC Microbiology 2010, 10:85 (22 March 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

12.

Research article   Open Access Highly Accessed

Inhibitory effects of 405 nm irradiation on Chlamydia trachomatis growth and characterization of the ensuing inflammatory response in HeLa cells

Cassandra J Wasson, Jessica L Zourelias, Nathan A Aardsma, Janis T Eells, Mike T Ganger, Justine M Schober, Troy A Skwor BMC Microbiology 2012, 12:176 (15 August 2012)

Abstract | Full text | PDF | PubMed

13.

Research article   Open Access Highly Accessed

Survey of bacterial diversity in chronic wounds using Pyrosequencing, DGGE, and full ribosome shotgun sequencing

Scot E Dowd, Yan Sun, Patrick R Secor, Daniel D Rhoads, Benjamin M Wolcott, Garth A James, Randall D Wolcott BMC Microbiology 2008, 8:43 (6 March 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

14.

Research article   Open Access

Staphylococcus epidermidis recovered from indwelling catheters exhibit enhanced biofilm dispersal and “self-renewal” through downregulation of agr

Lu Dai, Liang Yang, Chris Parsons, Victoria J Findlay, Søren Molin, Zhiqiang Qin BMC Microbiology 2012, 12:102 (8 June 2012)

Abstract | Full text | PDF | PubMed

15.

Methodology article   Open Access

Evaluation of an immunomagnetic separation method to capture Candida yeasts cells in blood

Véronique Apaire-Marchais, Marie Kempf, Corinne Lefrançois, Agnès Marot, Patricia Licznar, Jane Cottin, Daniel Poulain, Raymond Robert BMC Microbiology 2008, 8:157 (22 September 2008)

Abstract | Full text | PDF | PubMed

16.

Research article   Open Access Highly Accessed

Complete genome sequence of Enterococcus faecium strain TX16 and comparative genomic analysis of Enterococcus faecium genomes

Xiang Qin, Jessica R Galloway-Peña, Jouko Sillanpaa, Jung Roh, Sreedhar R Nallapareddy, Shahreen Chowdhury, Agathe Bourgogne, Tina Choudhury, Donna M Muzny, Christian J Buhay, Yan Ding, Shannon Dugan-Rocha, Wen Liu, Christie Kovar, Erica Sodergren, Sarah Highlander, Joseph F Petrosino, Kim C Worley, Richard A Gibbs, George M Weinstock, Barbara E Murray BMC Microbiology 2012, 12:135 (7 July 2012)

Abstract | Full text | PDF | PubMed

17.

Research article   Open Access

Programmed cell death in Saccharomyces cerevisiae is hampered by the deletion of GUP1 gene

Joana Tulha, Fábio Faria-Oliveira, Cândida Lucas, Célia Ferreira BMC Microbiology 2012, 12:80 (22 May 2012)

Abstract | Full text | PDF | PubMed

18.

Research article   Open Access

Dietary rice bran promotes resistance to Salmonella enterica serovar Typhimurium colonization in mice

Ajay Kumar, Angela Henderson, Genevieve M Forster, Andrew W Goodyear, Tiffany L Weir, Jan E Leach, Steven W Dow, Elizabeth P Ryan BMC Microbiology 2012, 12:71 (14 May 2012)

Abstract | Full text | PDF | PubMed | F1000 Biology

19.

Research article   Open Access Highly Accessed

Roles of iron acquisition systems in virulence of extraintestinal pathogenic Escherichia coli: salmochelin and aerobactin contribute more to virulence than heme in a chicken infection model

Qingqing Gao, Xiaobo Wang, Huiqing Xu, Yaya Xu, Jielu Ling, Debao Zhang, Song Gao, Xiufan Liu BMC Microbiology 2012, 12:143 (20 July 2012)

Abstract | Full text | PDF | PubMed

20.

Research article   Open Access Highly Accessed

Allelic sequence heterozygosity in single Giardia parasites

Johan Ankarklev, Staffan G Svärd, Marianne Lebbad BMC Microbiology 2012, 12:65 (3 May 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

Different alleles are present in the nuclei of a single Giardia trophozoite, which explains the high abundance of sequence heterogeneity commonly found when performing sequence based genotyping.

21.

Research article   Open Access Highly Accessed

Biofilm formation and virulence expression by Streptococcus mutans are altered when grown in dual-species model

Zezhang T Wen, David Yates, Sang-Joon Ahn, Robert A Burne BMC Microbiology 2010, 10:111 (14 April 2010)

Abstract | Full text | PDF | PubMed

22.

Research article   Open Access Highly Accessed

Biogenic amine production by the wine Lactobacillus brevis IOEB 9809 in systems that partially mimic the gastrointestinal tract stress

Pasquale Russo, Pilar Fernández de Palencia, Andrea Romano, María Fernández, Patrick Lucas, Giuseppe Spano, Paloma López BMC Microbiology 2012, 12:247 (31 October 2012)

Abstract | Full text | PDF | PubMed

23.

Research article   Open Access Highly Accessed

Microbiological quality of drinking water from dispensers in Italy

Giorgio Liguori, Ivan Cavallotti, Antonio Arnese, Ciro Amiranda, Daniela Anastasi, Italo F Angelillo BMC Microbiology 2010, 10:19 (26 January 2010)

Abstract | Full text | PDF | PubMed |  Editor’s summary

The water sampled from coolers in shops in Naples has higher levels of microorganisms than is recommended in European drinking water guidelines, but the tap water supply is not responsible for the contamination.

24.

Research article   Open Access Highly Accessed

Comparative genomics of Helicobacter pylori isolates recovered from ulcer disease patients in England

Farhana Kauser, M Abid Hussain, Irshad Ahmed, Sriramula Srinivas, S Manjulata Devi, Ahmed A Majeed, K Rajender Rao, Aleem A Khan, Leonardo A Sechi, Niyaz Ahmed BMC Microbiology 2005, 5:32 (25 May 2005)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

25.

Research article   Open Access Highly Accessed

Staphylococcus aureus biofilm formation at the physiologic glucose concentration depends on the S. aureus lineage

Sander Croes, Ruud H Deurenberg, Marie-Louise L Boumans, Patrick S Beisser, Cees Neef, Ellen E Stobberingh BMC Microbiology 2009, 9:229 (28 October 2009)

Abstract | Full text | PDF | PubMed

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