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Research article   Open Access Highly Accessed

Gene expression profiling in whole blood identifies distinct biological pathways associated with obesity

Sujoy Ghosh, Robert Dent, Mary-Ellen Harper, Shelby A Gorman, Joan S Stuart, Ruth McPherson BMC Medical Genomics 2010, 3:56 (1 December 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access

An empirical Bayes model for gene expression and methylation profiles in antiestrogen resistant breast cancer

Jaesik Jeong, Lang Li, Yunlong Liu, Kenneth P Nephew, Tim Huang, Changyu Shen BMC Medical Genomics 2010, 3:55 (25 November 2010)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Enrichment of ultraconserved elements among genomic imbalances causing mental delay and congenital anomalies

Francisco Martínez, Sandra Monfort, Mónica Roselló, Silvestre Oltra, David Blesa, Ramiro Quiroga, Sonia Mayo, Carmen Orellana BMC Medical Genomics 2010, 3:54 (23 November 2010)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Concomitant heterochromatinisation and down-regulation of gene expression unveils epigenetic silencing of RELB in an aggressive subset of chronic lymphocytic leukemia in males

Jean-Brice Marteau, Odile Rigaud, Thibaut Brugat, Nathalie Gault, Laurent Vallat, Mogens Kruhoffer, Torben F Orntoft, Florence Nguyen-Khac, Sylvie Chevillard, Hélène Merle-Beral, Jozo Delic BMC Medical Genomics 2010, 3:53 (10 November 2010)

Abstract | Full text | PDF | PubMed

Technical advance   Open Access

Conversion of a molecular classifier obtained by gene expression profiling into a classifier based on real-time PCR: a prognosis predictor for gliomas

Satoru Kawarazaki, Kazuya Taniguchi, Mitsuaki Shirahata, Yoji Kukita, Manabu Kanemoto, Nobuhiro Mikuni, Nobuo Hashimoto, Susumu Miyamoto, Jun A Takahashi, Kikuya Kato BMC Medical Genomics 2010, 3:52 (10 November 2010)

Abstract | Full text | PDF | PubMed

Research article   Open Access Highly Accessed

Multi-cancer computational analysis reveals invasion-associated variant of desmoplastic reaction involving INHBA, THBS2 and COL11A1

Hoon Kim, John Watkinson, Vinay Varadan, Dimitris Anastassiou BMC Medical Genomics 2010, 3:51 (3 November 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Software   Open Access Highly Accessed

Genotator: A disease-agnostic tool for genetic annotation of disease

Dennis P Wall, Rimma Pivovarov, Mark Tong, Jae-Yoon Jung, Vincent A Fusaro, Todd F DeLuca, Peter J Tonellato BMC Medical Genomics 2010, 3:50 (29 October 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access

Literature-based discovery of diabetes- and ROS-related targets

Junguk Hur, Kelli A Sullivan, Adam D Schuyler, Yu Hong, Manjusha Pande, David J States, H V Jagadish, Eva L Feldman BMC Medical Genomics 2010, 3:49 (27 October 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access Highly Accessed

Hepatic microRNA expression is associated with the response to interferon treatment of chronic hepatitis C

Yoshiki Murakami, Masami Tanaka, Hidenori Toyoda, Katsuyuki Hayashi, Masahiko Kuroda, Atsushi Tajima, Kunitada Shimotohno BMC Medical Genomics 2010, 3:48 (22 October 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access

Admixture mapping of end stage kidney disease genetic susceptibility using estimated mutual information ancestry informative markers

Liran I Shlush, Sivan Bercovici, Walter G Wasser, Guennady Yudkovsky, Alan Templeton, Dan Geiger, Karl Skorecki BMC Medical Genomics 2010, 3:47 (18 October 2010)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Chemokine gene expression in lung CD8 T cells correlates with protective immunity in mice immunized intra-nasally with Adenovirus-85A

Lian N Lee, Dilair Baban, Edward O Ronan, Jiannis Ragoussis, Peter CL Beverley, Elma Z Tchilian BMC Medical Genomics 2010, 3:46 (13 October 2010)

Abstract | Full text | PDF | PubMed

Research article   Open Access Highly Accessed

Gene regulatory network reveals oxidative stress as the underlying molecular mechanism of type 2 diabetes and hypertension

Jesmin, Mahbubur SM Rashid, Hasan Jamil, Raquel Hontecillas, Josep Bassaganya-Riera BMC Medical Genomics 2010, 3:45 (13 October 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access

Molecular signature of response and potential pathways related to resistance to the HSP90 inhibitor, 17AAG, in breast cancer

Magdalena Zajac, Gonzalo Gomez, Javier Benitez, Beatriz Martínez-Delgado BMC Medical Genomics 2010, 3:44 (4 October 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access Highly Accessed

LNCaP Atlas: Gene expression associated with in vivo progression to castration-recurrent prostate cancer

Tammy L Romanuik, Gang Wang, Olena Morozova, Allen Delaney, Marco A Marra, Marianne D Sadar BMC Medical Genomics 2010, 3:43 (24 September 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access

Polymorphisms in folate-metabolizing genes, chromosome damage, and risk of Down syndrome in Italian women: identification of key factors using artificial neural networks

Fabio Coppedè, Enzo Grossi, Francesca Migheli, Lucia Migliore BMC Medical Genomics 2010, 3:42 (24 September 2010)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Evaluation of the bacterial diversity of Pressure ulcers using bTEFAP pyrosequencing

Drake M Smith, David E Snow, Eric Rees, Ann M Zischkau, J Delton Hanson, Randall D Wolcott, Yan Sun, Jennifer White, Shashi Kumar, Scot E Dowd BMC Medical Genomics 2010, 3:41 (21 September 2010)

Abstract | Full text | PDF | PubMed | F1000 Biology

Research article   Open Access

Impairment of circulating endothelial progenitors in Down syndrome

Valerio Costa, Linda Sommese, Amelia Casamassimi, Roberta Colicchio, Claudia Angelini, Valentina Marchesano, Lara Milone, Bartolomeo Farzati, Alfonso Giovane, Carmela Fiorito, Monica Rienzo, Marco Picardi, Bice Avallone, Massimiliano Marco Corsi, Berardo Sarubbi, Raffaele Calabrò, Paola Salvatore, Alfredo Ciccodicola, Claudio Napoli BMC Medical Genomics 2010, 3:40 (13 September 2010)

Abstract | Full text | PDF | PubMed

Research article   Open Access Highly Accessed

Analyzing the regulation of metabolic pathways in human breast cancer

Gunnar Schramm, Eva-Maria Surmann, Stefan Wiesberg, Marcus Oswald, Gerhard Reinelt, Roland Eils, Rainer König BMC Medical Genomics 2010, 3:39 (10 September 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access

A towards-multidimensional screening approach to predict candidate genes of rheumatoid arthritis based on SNP, structural and functional annotations

Liangcai Zhang, Wan Li, Leilei Song, Lina Chen BMC Medical Genomics 2010, 3:38 (20 August 2010)

Abstract | Full text | PDF | PubMed

Research article   Open Access Highly Accessed

The NRF2-mediated oxidative stress response pathway is associated with tumor cell resistance to arsenic trioxide across the NCI-60 panel

Qian Liu, Hao Zhang, Lisa Smeester, Fei Zou, Matt Kesic, Ilona Jaspers, Jingbo Pi, Rebecca C Fry BMC Medical Genomics 2010, 3:37 (13 August 2010)

Abstract | Full text | PDF | PubMed

Research article   Open Access Highly Accessed

Impact of RNA degradation on gene expression profiling

Lennart Opitz, Gabriela Salinas-Riester, Marian Grade, Klaus Jung, Peter Jo, Georg Emons, B Michael Ghadimi, Tim Beißbarth, Jochen Gaedcke BMC Medical Genomics 2010, 3:36 (9 August 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access

Genetic integrity of the human Y chromosome exposed to groundwater arsenic

Safdar Ali, Sher Ali BMC Medical Genomics 2010, 3:35 (6 August 2010)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Co-expressed immune and metabolic genes in visceral and subcutaneous adipose tissue from severely obese individuals are associated with plasma HDL and glucose levels: a microarray study

Marcel GM Wolfs, Sander S Rensen, Elinda J Bruin-Van Dijk, Froukje J Verdam, Jan-Willem Greve, Bahram Sanjabi, Marcel Bruinenberg, Cisca Wijmenga, Timon W van Haeften, Wim A Buurman, Lude Franke, Marten H Hofker BMC Medical Genomics 2010, 3:34 (5 August 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access Highly Accessed

Genome-wide DNA methylation analysis for diabetic nephropathy in type 1 diabetes mellitus

Christopher G Bell, Andrew E Teschendorff, Vardhman K Rakyan, Alexander P Maxwell, Stephan Beck, David A Savage BMC Medical Genomics 2010, 3:33 (5 August 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access Highly Accessed

A sequence-based approach to identify reference genes for gene expression analysis

Raj Chari, Kim M Lonergan, Larissa A Pikor, Bradley P Coe, Chang Zhu, Timothy HW Chan, Calum E MacAulay, Ming-Sound Tsao, Stephen Lam, Raymond T Ng, Wan L Lam BMC Medical Genomics 2010, 3:32 (3 August 2010)

Abstract | Full text | PDF | PubMed

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