Software  

CNVassoc: Association analysis of CNV data using R

Isaac Subirana, Ramon Diaz-Uriarte, Gavin Lucas, Juan R Gonzalez BMC Medical Genomics 2011, 4:47 (24 May 2011)

Abstract | Full text | PDF | PubMed

Research article  

Lineage relationship of prostate cancer cell types based on gene expression

Laura E Pascal, Ricardo ZN Vêncio, Robert L Vessella, Carol B Ware, Eneida F Vêncio, Gareth Denyer, Alvin Y Liu BMC Medical Genomics 2011, 4:46 (23 May 2011)

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Research article  

Distinct DNA methylation epigenotypes in bladder cancer from different Chinese sub-populations and its implication in cancer detection using voided urine

Pi-Che Chen, Ming-Hsuan Tsai, Sidney KH Yip, Yeong-Chin Jou, Chi-Fai Ng, Yanning Chen, Xiaoling Wang, Wei Huang, Chun-Liang Tung, Gary CW Chen, Martin MS Huang, Joanna HM Tong, Eing-Ju Song, De-Ching Chang, Cheng-Da Hsu, Ka-Fai To, Cheng-Huang Shen, Michael WY Chan BMC Medical Genomics 2011, 4:45 (20 May 2011)

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Research article  

Modeling microRNA-mRNA Interactions Using PLS Regression in Human Colon Cancer

Xiaohong Li, Ryan Gill, Nigel GF Cooper, Jae Yoo, Susmita Datta BMC Medical Genomics 2011, 4:44 (19 May 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Database  

The Roche Cancer Genome Database 2.0

Jan Küntzer, Daniela Maisel, Hans-Peter Lenhof, Stefan Klostermann, Helmut Burtscher BMC Medical Genomics 2011, 4:43 (17 May 2011)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Research article  

Comprehensive expressional analyses of antisense transcripts in colon cancer tissues using artificial antisense probes

Rintaro Saito, Keisuke Kohno, Yuki Okada, Yuko Osada, Koji Numata, Chihiro Kohama, Kazufumi Watanabe, Hajime Nakaoka, Naoyuki Yamamoto, Akio Kanai, Hiroshi Yasue, Soichiro Murata, Kuniya Abe, Masaru Tomita, Nobuhiro Ohkohchi, Hidenori Kiyosawa BMC Medical Genomics 2011, 4:42 (16 May 2011)

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Research article  

Molecular conservation of estrogen-response associated with cell cycle regulation, hormonal carcinogenesis and cancer in zebrafish and human cancer cell lines

Siew Lam, Serene GP Lee, Chin Y Lin, Jane S Thomsen, Pan Y Fu, Karuturi RK Murthy, Haixia Li, Kunde R Govindarajan, Lin CH Nick, Guillaume Bourque, Zhiyuan Gong, Thomas Lufkin, Edison T Liu, Sinnakaruppan Mathavan BMC Medical Genomics 2011, 4:41 (16 May 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article  

Chronic insulin treatment of diabetes does not fully normalize alterations in the retinal transcriptome

Georgina V Bixler, Heather D VanGuilder, Robert M Brucklacher, Scot R Kimball, Sarah K Bronson, Willard M Freeman BMC Medical Genomics 2011, 4:40 (15 May 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article  

Detecting differential allelic expression using high-resolution melting curve analysis: application to the breast cancer susceptibility gene CHEK2

Tú Nguyen-Dumont, Lars P Jordheim, Jocelyne Michelon, Nathalie Forey, Sandrine McKay-Chopin, Kathleen Cuningham Foundation Consortium for Research into Familial Aspects of Breast Cancer (kConFab), Olga Sinilnikova, Florence Le Calvez-Kelm, Melissa C Southey, Sean V Tavtigian, Fabienne Lesueur BMC Medical Genomics 2011, 4:39 (11 May 2011)

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Research article  

Interaction of a traditional Chinese Medicine (PHY906) and CPT-11 on the inflammatory process in the tumor microenvironment

Ena Wang, Scott Bussom, Jinguo Chen, Courtney Quinn, Davide Bedognetti, Wing Lam, Fulan Guan, Zaoli Jiang, Yichao Mark, Yingdong Zhao, David F Stroncek, Jeffrey White, Francesco M Marincola, Yung-Chi Cheng BMC Medical Genomics 2011, 4:38 (11 May 2011)

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Research article  

A large scale survey reveals that chromosomal copy-number alterations significantly affect gene modules involved in cancer initiation and progression

Eva Alloza, Fátima Al-Shahrour, Juan C Cigudosa, Joaquín Dopazo BMC Medical Genomics 2011, 4:37 (6 May 2011)

Abstract | Full text | PDF | PubMed