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		Research article Circadian transcriptome analysis in human fibroblasts from Hunter syndrome and impact of iduronate-2-sulfatase treatment Gianluigi Mazzoccoli, Rosella Tomanin, Tommaso Mazza, Francesca D¿Avanzo, Marika Salvalaio, Laura Rigon, Alessandra Zanetti, Valerio Pazienza, Massimo Francavilla, Francesco Giuliani, Manlio Vinciguerra, Maurizio Scarpa BMC Medical Genomics 2013, 6:37 (2 October 2013) Abstract \| Provisional PDF
		Research article MicroRNA/mRNA profiling and regulatory network of intracranial aneurysm Yugang Jiang, Mingming Zhang, Hua He, Jia Chen, Hua Zeng, Jia Li, Ranhui Duan BMC Medical Genomics 2013, 6:36 (30 September 2013) Abstract \| Provisional PDF
		Research article Genomic pathway analysis reveals that EZH2 and HDAC4 represent mutually exclusive epigenetic pathways across human cancers Adam L Cohen, Stephen R Piccolo, Luis Cheng, Rafaella Soldi, Bing Han, W Evan Johnson, Andrea H Bild BMC Medical Genomics 2013, 6:35 (30 September 2013) Abstract \| Provisional PDF
		Research article Pathway-based outlier method reveals heterogeneous genomic structure of autism in blood transcriptome Malcolm G Campbell, Isaac S Kohane, Sek Kong BMC Medical Genomics 2013, 6:34 (24 September 2013) Abstract \| Full text \| PDF \| PubMed
		Research article An integrated transcriptome and epigenome analysis identifies a novel candidate gene for pancreatic cancer Jinping Jia, Hemang Parikh, Wenming Xiao, Jason W Hoskins, Holger Pflicke, Xuelu Liu, Irene Collins, Weiyin Zhou, Zhaoming Wang, John Powell, Snorri S Thorgeirsson, Udo Rudloff, Gloria M Petersen, Laufey T Amundadottir BMC Medical Genomics 2013, 6:33 (22 September 2013) Abstract \| Full text \| PDF \| PubMed
		Case report De novo frameshift mutation in ASXL3 in a patient with global developmental delay, microcephaly, and craniofacial anomalies Darrell L Dinwiddie, Sarah E Soden, Carol J Saunders, Neil A Miller, Emily G Farrow, Laurie D Smith, Stephen F Kingsmore BMC Medical Genomics 2013, 6:32 (17 September 2013) Abstract \| Provisional PDF \| PubMed
		Software Genotyping of human neutrophil antigens (HNA) from whole genome sequencing data Hsueh-Ting Chu, Han Lin, Theresa Tsun-Hui Tsao, Chun-Fan Chang, William WL Hsiao, Tze-Jung Yeh, Ching-Mao Chang, Yen-Wenn Liu, Tse-Yi Wang, Ko-Chun Yang, Tsung-Jui Chen, Jen-Chih Chen, Kuang-Chi Chen, Cheng-Yan Kao BMC Medical Genomics 2013, 6:31 (12 September 2013) Abstract \| Provisional PDF \| PubMed
		Research article Identification of potential synthetic lethal genes to p53 using a computational biology approach Xiaosheng Wang, Richard Simon BMC Medical Genomics 2013, 6:30 (11 September 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Polymorphisms in nitric oxide synthase and endothelin genes among children with obstructive sleep apnea Siriporn Chatsuriyawong, David Gozal, Leila Kheirandish-Gozal, Rakesh Bhattacharjee, Ahamed A Khalyfa, Yang Wang, Wasana Sukhumsirichart, Abdelnaby Khalyfa BMC Medical Genomics 2013, 6:29 (6 September 2013) Abstract \| Full text \| PDF \| PubMed
		Research article Whole transcriptome sequencing identifies tumor-specific mutations in human oral squamous cell carcinoma Qu Zhang, Jun Zhang, Hong Jin, Sitong Sheng BMC Medical Genomics 2013, 6:28 (4 September 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Small nucleolar RNAs as new biomarkers in chronic lymphocytic leukemia Domenica Ronchetti, Laura Mosca, Giovanna Cutrona, Giacomo Tuana, Massimo Gentile, Sonia Fabris, Luca Agnelli, Gabriella Ciceri, Serena Matis, Carlotta Massucco, Monica Colombo, Daniele Reverberi, Anna Recchia, Sabrina Bossio, Massimo Negrini, Pierfrancesco Tassone, Fortunato Morabito, Manlio Ferrarini, Antonino Neri BMC Medical Genomics 2013, 6:27 (3 September 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Microarray characterization of gene expression changes in blood during acute ethanol exposure Doris M Kupfer, Vicky L White, David L Strayer, Dennis J Crouch, Dennis Burian BMC Medical Genomics 2013, 6:26 (25 July 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Genetic lineages of undifferentiated-type gastric carcinomas analysed by unsupervised clustering of genomic DNA microarray data Ayano Sonoda, Ken-ichi Mukaisho, Takahisa Nakayama, Vo Thi Diem, Takanori Hattori, Akira Andoh, Yoshihide Fujiyama, Hiroyuki Sugihara BMC Medical Genomics 2013, 6:25 (19 July 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Validation of microarray data in human lymphoblasts shows a role of the ubiquitin-proteasome system and NF-kB in the pathogenesis of Down syndrome Barbara Granese, Iris Scala, Carmen Spatuzza, Anna Valentino, Marcella Coletta, Rosa Vacca, Pasquale De Luca, Generoso Andria BMC Medical Genomics 2013, 6:24 (5 July 2013) Abstract \| Full text \| PDF \| PubMed
		Research article Alteration of human blood cell transcriptome in uremia Andreas Scherer, Oliver P Günther, Robert F Balshaw, Zsuzsanna Hollander, Janet Wilson-McManus, Raymond Ng, W McMaster, Bruce M McManus, Paul A Keown BMC Medical Genomics 2013, 6:23 (28 June 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Genome-wide expression profiling and functional characterization of SCA28 lymphoblastoid cell lines reveal impairment in cell growth and activation of apoptotic pathways Cecilia Mancini, Paola Roncaglia, Alessandro Brussino, Giovanni Stevanin, Nicola Lo Buono, Helena Krmac, Francesca Maltecca, Elena Gazzano, Anna Bartoletti Stella, Maria Calvaruso, Luisa Iommarini, Claudia Cagnoli, Sylvie Forlani, Isabelle Le Ber, Alexandra Durr, Alexis Brice, Dario Ghigo, Giorgio Casari, Anna Porcelli, Ada Funaro, Giuseppe Gasparre, Stefano Gustincich, Alfredo Brusco BMC Medical Genomics 2013, 6:22 (18 June 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Interplay between estrogen receptor and AKT in Estradiol-induced alternative splicing Poornima Bhat-Nakshatri, Eun-Kyung Song, Nikail R Collins, Vladimir N Uversky, A Dunker, Bert W O’Malley, Tim R Geistlinger, Jason S Carroll, Myles Brown, Harikrishna Nakshatri BMC Medical Genomics 2013, 6:21 (11 June 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Saliva sampling in global clinical studies: the impact of low sampling volume on performance of DNA in downstream genotyping experiments David J Pulford, Michael Mosteller, J David Briley, Kelley W Johansson, Anita J Nelsen BMC Medical Genomics 2013, 6:20 (10 June 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Debate Genotype-driven recruitment: a strategy whose time has come? Isabelle Budin-Ljøsne, Kaitlin J Soye, Anne Tassé, Bartha Knoppers, Jennifer R Harris BMC Medical Genomics 2013, 6:19 (23 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Cidofovir selectivity is based on the different response of normal and cancer cells to DNA damage Tim De Schutter, Graciela Andrei, Dimitri Topalis, Lieve Naesens, Robert Snoeck BMC Medical Genomics 2013, 6:18 (23 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article A specific immune transcriptomic profile discriminates chronic kidney disease patients in predialysis from hemodialyzed patients Gianluigi Zaza, Simona Granata, Federica Rascio, Paola Pontrelli, Maria Pia Dell’Oglio, Sharon Natasha Cox, Giovanni Pertosa, Giuseppe Grandaliano, Antonio Lupo BMC Medical Genomics 2013, 6:17 (10 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed \| Editor’s summary Transcriptome profiles of patients undergoing haemodialysis show a different immune pattern compared to patients with chronic kidney disease without dialysis, although it cannot yet be ruled out that other confounding factors are responsible.
		Research article Serum microRNAs profile from genome-wide serves as a fingerprint for diagnosis of acute myocardial infarction and angina pectoris Chunjian Li, Zhijuan Fang, Ting Jiang, Qiu Zhang, Chao Liu, Chenyu Zhang, Yang Xiang BMC Medical Genomics 2013, 6:16 (4 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Genome-wide search for the genes accountable for the induced resistance to HIV-1 infection in activated CD4+ T cells: apparent transcriptional signatures, co-expression networks and possible cellular processes Wen-Wen Xu, Miao-Jun Han, Dai Chen, Ling Chen, Yan Guo, Andrew Willden, Di-Qiu Liu, Hua-Tang Zhang BMC Medical Genomics 2013, 6:15 (1 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed \| Editor’s summary Important regulatory genes associated with cell cycle functions and the actin cytoskeleton are potentially implicated with HIV-1 resistance in CD4+ T cells, elucidated using a co-expression network analysis.
		Research article A comprehensive analysis of adiponectin QTLs using SNP association, SNP cis-effects on peripheral blood gene expression and gene expression correlation identified novel metabolic syndrome (MetS) genes with potential role in carcinogenesis and systemic inflammation Yi Zhang, Jack W Kent, Michael Olivier, Omar Ali, Diana Cerjak, Ulrich Broeckel, Reham M Abdou, Thomas D Dyer, Anthony Comuzzie, Joanne E Curran, Melanie A Carless, David L Rainwater, Harald H H Göring, John Blangero, Ahmed H Kissebah BMC Medical Genomics 2013, 6:14 (29 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Analysis of a gene co-expression network establishes robust association between Col5a2 and ischemic heart disease Francisco Azuaje, Lu Zhang, Céline Jeanty, Sarah-Lena Puhl, Sophie Rodius, Daniel R Wagner BMC Medical Genomics 2013, 6:13 (10 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed

	All
		Research article Circadian transcriptome analysis in human fibroblasts from Hunter syndrome and impact of iduronate-2-sulfatase treatment Gianluigi Mazzoccoli, Rosella Tomanin, Tommaso Mazza, Francesca D¿Avanzo, Marika Salvalaio, Laura Rigon, Alessandra Zanetti, Valerio Pazienza, Massimo Francavilla, Francesco Giuliani, Manlio Vinciguerra, Maurizio Scarpa BMC Medical Genomics 2013, 6:37 (2 October 2013) Abstract \| Provisional PDF
		Research article MicroRNA/mRNA profiling and regulatory network of intracranial aneurysm Yugang Jiang, Mingming Zhang, Hua He, Jia Chen, Hua Zeng, Jia Li, Ranhui Duan BMC Medical Genomics 2013, 6:36 (30 September 2013) Abstract \| Provisional PDF
		Research article Genomic pathway analysis reveals that EZH2 and HDAC4 represent mutually exclusive epigenetic pathways across human cancers Adam L Cohen, Stephen R Piccolo, Luis Cheng, Rafaella Soldi, Bing Han, W Evan Johnson, Andrea H Bild BMC Medical Genomics 2013, 6:35 (30 September 2013) Abstract \| Provisional PDF
		Research article Pathway-based outlier method reveals heterogeneous genomic structure of autism in blood transcriptome Malcolm G Campbell, Isaac S Kohane, Sek Kong BMC Medical Genomics 2013, 6:34 (24 September 2013) Abstract \| Full text \| PDF \| PubMed
		Research article An integrated transcriptome and epigenome analysis identifies a novel candidate gene for pancreatic cancer Jinping Jia, Hemang Parikh, Wenming Xiao, Jason W Hoskins, Holger Pflicke, Xuelu Liu, Irene Collins, Weiyin Zhou, Zhaoming Wang, John Powell, Snorri S Thorgeirsson, Udo Rudloff, Gloria M Petersen, Laufey T Amundadottir BMC Medical Genomics 2013, 6:33 (22 September 2013) Abstract \| Full text \| PDF \| PubMed
		Case report De novo frameshift mutation in ASXL3 in a patient with global developmental delay, microcephaly, and craniofacial anomalies Darrell L Dinwiddie, Sarah E Soden, Carol J Saunders, Neil A Miller, Emily G Farrow, Laurie D Smith, Stephen F Kingsmore BMC Medical Genomics 2013, 6:32 (17 September 2013) Abstract \| Provisional PDF \| PubMed
		Software Genotyping of human neutrophil antigens (HNA) from whole genome sequencing data Hsueh-Ting Chu, Han Lin, Theresa Tsun-Hui Tsao, Chun-Fan Chang, William WL Hsiao, Tze-Jung Yeh, Ching-Mao Chang, Yen-Wenn Liu, Tse-Yi Wang, Ko-Chun Yang, Tsung-Jui Chen, Jen-Chih Chen, Kuang-Chi Chen, Cheng-Yan Kao BMC Medical Genomics 2013, 6:31 (12 September 2013) Abstract \| Provisional PDF \| PubMed
		Research article Identification of potential synthetic lethal genes to p53 using a computational biology approach Xiaosheng Wang, Richard Simon BMC Medical Genomics 2013, 6:30 (11 September 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Polymorphisms in nitric oxide synthase and endothelin genes among children with obstructive sleep apnea Siriporn Chatsuriyawong, David Gozal, Leila Kheirandish-Gozal, Rakesh Bhattacharjee, Ahamed A Khalyfa, Yang Wang, Wasana Sukhumsirichart, Abdelnaby Khalyfa BMC Medical Genomics 2013, 6:29 (6 September 2013) Abstract \| Full text \| PDF \| PubMed
		Research article Whole transcriptome sequencing identifies tumor-specific mutations in human oral squamous cell carcinoma Qu Zhang, Jun Zhang, Hong Jin, Sitong Sheng BMC Medical Genomics 2013, 6:28 (4 September 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Small nucleolar RNAs as new biomarkers in chronic lymphocytic leukemia Domenica Ronchetti, Laura Mosca, Giovanna Cutrona, Giacomo Tuana, Massimo Gentile, Sonia Fabris, Luca Agnelli, Gabriella Ciceri, Serena Matis, Carlotta Massucco, Monica Colombo, Daniele Reverberi, Anna Recchia, Sabrina Bossio, Massimo Negrini, Pierfrancesco Tassone, Fortunato Morabito, Manlio Ferrarini, Antonino Neri BMC Medical Genomics 2013, 6:27 (3 September 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Microarray characterization of gene expression changes in blood during acute ethanol exposure Doris M Kupfer, Vicky L White, David L Strayer, Dennis J Crouch, Dennis Burian BMC Medical Genomics 2013, 6:26 (25 July 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Genetic lineages of undifferentiated-type gastric carcinomas analysed by unsupervised clustering of genomic DNA microarray data Ayano Sonoda, Ken-ichi Mukaisho, Takahisa Nakayama, Vo Thi Diem, Takanori Hattori, Akira Andoh, Yoshihide Fujiyama, Hiroyuki Sugihara BMC Medical Genomics 2013, 6:25 (19 July 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Validation of microarray data in human lymphoblasts shows a role of the ubiquitin-proteasome system and NF-kB in the pathogenesis of Down syndrome Barbara Granese, Iris Scala, Carmen Spatuzza, Anna Valentino, Marcella Coletta, Rosa Vacca, Pasquale De Luca, Generoso Andria BMC Medical Genomics 2013, 6:24 (5 July 2013) Abstract \| Full text \| PDF \| PubMed
		Research article Alteration of human blood cell transcriptome in uremia Andreas Scherer, Oliver P Günther, Robert F Balshaw, Zsuzsanna Hollander, Janet Wilson-McManus, Raymond Ng, W McMaster, Bruce M McManus, Paul A Keown BMC Medical Genomics 2013, 6:23 (28 June 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Genome-wide expression profiling and functional characterization of SCA28 lymphoblastoid cell lines reveal impairment in cell growth and activation of apoptotic pathways Cecilia Mancini, Paola Roncaglia, Alessandro Brussino, Giovanni Stevanin, Nicola Lo Buono, Helena Krmac, Francesca Maltecca, Elena Gazzano, Anna Bartoletti Stella, Maria Calvaruso, Luisa Iommarini, Claudia Cagnoli, Sylvie Forlani, Isabelle Le Ber, Alexandra Durr, Alexis Brice, Dario Ghigo, Giorgio Casari, Anna Porcelli, Ada Funaro, Giuseppe Gasparre, Stefano Gustincich, Alfredo Brusco BMC Medical Genomics 2013, 6:22 (18 June 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Interplay between estrogen receptor and AKT in Estradiol-induced alternative splicing Poornima Bhat-Nakshatri, Eun-Kyung Song, Nikail R Collins, Vladimir N Uversky, A Dunker, Bert W O’Malley, Tim R Geistlinger, Jason S Carroll, Myles Brown, Harikrishna Nakshatri BMC Medical Genomics 2013, 6:21 (11 June 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Saliva sampling in global clinical studies: the impact of low sampling volume on performance of DNA in downstream genotyping experiments David J Pulford, Michael Mosteller, J David Briley, Kelley W Johansson, Anita J Nelsen BMC Medical Genomics 2013, 6:20 (10 June 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Debate Genotype-driven recruitment: a strategy whose time has come? Isabelle Budin-Ljøsne, Kaitlin J Soye, Anne Tassé, Bartha Knoppers, Jennifer R Harris BMC Medical Genomics 2013, 6:19 (23 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Cidofovir selectivity is based on the different response of normal and cancer cells to DNA damage Tim De Schutter, Graciela Andrei, Dimitri Topalis, Lieve Naesens, Robert Snoeck BMC Medical Genomics 2013, 6:18 (23 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article A specific immune transcriptomic profile discriminates chronic kidney disease patients in predialysis from hemodialyzed patients Gianluigi Zaza, Simona Granata, Federica Rascio, Paola Pontrelli, Maria Pia Dell’Oglio, Sharon Natasha Cox, Giovanni Pertosa, Giuseppe Grandaliano, Antonio Lupo BMC Medical Genomics 2013, 6:17 (10 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed \| Editor’s summary Transcriptome profiles of patients undergoing haemodialysis show a different immune pattern compared to patients with chronic kidney disease without dialysis, although it cannot yet be ruled out that other confounding factors are responsible.
		Research article Serum microRNAs profile from genome-wide serves as a fingerprint for diagnosis of acute myocardial infarction and angina pectoris Chunjian Li, Zhijuan Fang, Ting Jiang, Qiu Zhang, Chao Liu, Chenyu Zhang, Yang Xiang BMC Medical Genomics 2013, 6:16 (4 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Genome-wide search for the genes accountable for the induced resistance to HIV-1 infection in activated CD4+ T cells: apparent transcriptional signatures, co-expression networks and possible cellular processes Wen-Wen Xu, Miao-Jun Han, Dai Chen, Ling Chen, Yan Guo, Andrew Willden, Di-Qiu Liu, Hua-Tang Zhang BMC Medical Genomics 2013, 6:15 (1 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed \| Editor’s summary Important regulatory genes associated with cell cycle functions and the actin cytoskeleton are potentially implicated with HIV-1 resistance in CD4+ T cells, elucidated using a co-expression network analysis.
		Research article A comprehensive analysis of adiponectin QTLs using SNP association, SNP cis-effects on peripheral blood gene expression and gene expression correlation identified novel metabolic syndrome (MetS) genes with potential role in carcinogenesis and systemic inflammation Yi Zhang, Jack W Kent, Michael Olivier, Omar Ali, Diana Cerjak, Ulrich Broeckel, Reham M Abdou, Thomas D Dyer, Anthony Comuzzie, Joanne E Curran, Melanie A Carless, David L Rainwater, Harald H H Göring, John Blangero, Ahmed H Kissebah BMC Medical Genomics 2013, 6:14 (29 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Analysis of a gene co-expression network establishes robust association between Col5a2 and ischemic heart disease Francisco Azuaje, Lu Zhang, Céline Jeanty, Sarah-Lena Puhl, Sophie Rodius, Daniel R Wagner BMC Medical Genomics 2013, 6:13 (10 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed