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Human and rodent genomics

This section covers the genome structure and function in humans, primates and rodents.

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1.

Research article   Open Access

Identification of thyroid hormone receptor binding sites in developing mouse cerebellum

Remi Gagne, James R Green, Hongyan Dong, Mike G Wade, Carole L Yauk BMC Genomics 2013, 14:341 (23 May 2013)

Abstract | Provisional PDF

2.

Research article   Open Access

Integrative genomic analysis of CREB defines a critical role for transcription factor networks in mediating the fed/fasted switch in liver

Logan J Everett, John Le Lay, Sabina Lukovac, Diana Bernstein, David J Steger, Mitchell A Lazar, Klaus H Kaestner BMC Genomics 2013, 14:337 (17 May 2013)

Abstract | Provisional PDF | PubMed

3.

Research article   Open Access

A gene expression restriction network mediated by sense and antisense Alu sequences located on protein-coding messenger RNAs

Kung-Hao Liang, Chau-Ting Yeh BMC Genomics 2013, 14:325 (11 May 2013)

Abstract | Full text | PDF | ePUB | PubMed

4.

Research article   Open Access

Fate of the human Y chromosome linked genes and loci in prostate cancer cell lines DU145 and LNCaP

Sandeep Yadav, Anju Kumari, Sher Ali BMC Genomics 2013, 14:323 (11 May 2013)

Abstract | Full text | PDF | ePUB | PubMed

5.

Research article   Open Access

Temporal changes of cytochrome P450 (Cyp) and eicosanoid-related gene expression in the rat brain after traumatic brain injury

Matthew Birnie, Ryan Morrison, Ramatoulie Camara, Kenneth I Strauss BMC Genomics 2013, 14:303 (4 May 2013)

Abstract | Full text | PDF | ePUB | PubMed

6.

Methodology article   Open Access

Bacillus subtilis genome vector-based complete manipulation and reconstruction of genomic DNA for mouse transgenesis

Tetsuo Iwata, Shinya Kaneko, Yuh Shiwa, Takayuki Enomoto, Hirofumi Yoshikawa, Junji Hirota BMC Genomics 2013, 14:300 (3 May 2013)

Abstract | Full text | PDF | ePUB | PubMed

7.

Research article   Open Access

5′ tRNA halves are present as abundant complexes in serum, concentrated in blood cells, and modulated by aging and calorie restriction

Joseph M Dhahbi, Stephen R Spindler, Hani Atamna, Amy Yamakawa, Dario Boffelli, Patricia Mote, David IK Martin BMC Genomics 2013, 14:298 (2 May 2013)

Abstract | Full text | PDF | ePUB | PubMed

8.

Methodology article   Open Access Highly Accessed

A data-driven approach to preprocessing Illumina 450K methylation array data

Ruth Pidsley, Chloe C Y Wong, Manuela Volta, Katie Lunnon, Jonathan Mill, Leonard C Schalkwyk BMC Genomics 2013, 14:293 (1 May 2013)

Abstract | Provisional PDF | PubMed

9.

Research article   Open Access Highly Accessed

Genome-wide promoter methylation profile of human testis and epididymis: identified from cell-free seminal DNA

Chunlin Wu, Xiaofang Ding, Honggang Li, Changhong Zhu, Chengliang Xiong BMC Genomics 2013, 14:288 (28 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

10.

Research article   Open Access

Gene expression patterns following unilateral traumatic brain injury reveals a local pro-inflammatory and remote anti-inflammatory response

Todd E White, Gregory D Ford, Monique C Surles-Zeigler, Alicia S Gates, Michelle C LaPlaca, Byron D Ford BMC Genomics 2013, 14:282 (25 April 2013)

Abstract | Provisional PDF | PubMed

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