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Eukaryote microbial genomics

This section covers the structure and function of genomes of single-celled parasites, yeasts, fungi and viruses.

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101.

Research article   Open Access Highly Accessed

Directional gene expression and antisense transcripts in sexual and asexual stages of Plasmodium falciparum

María J López-Barragán, Jacob Lemieux, Mariam Quiñones, Kim C Williamson, Alvaro Molina-Cruz, Kairong Cui, Carolina Barillas-Mury, Keji Zhao, Xin-zhuan Su BMC Genomics 2011, 12:587 (30 November 2011)

Abstract | Full text | PDF | PubMed | 1 comment

102.

Research article   Open Access Highly Accessed

Identification and analysis of the RNA degrading complexes and machinery of Giardia lamblia using an in silico approach

Christopher W Williams, Heidi G Elmendorf BMC Genomics 2011, 12:586 (29 November 2011)

Abstract | Full text | PDF | PubMed

103.

Research article   Open Access Highly Accessed

Closely related Campylobacter jejuni strains from different sources reveal a generalist rather than a specialist lifestyle

Eugenia Gripp, Daniela Hlahla, Xavier Didelot, Friederike Kops, Sven Maurischat, Karsten Tedin, Thomas Alter, Lüppo Ellerbroek, Kerstin Schreiber, Dietmar Schomburg, Traute Janssen, Patrick Bartholomäus, Dirk Hofreuter, Sabrina Woltemate, Markus Uhr, Birgit Brenneke, Petra Grüning, Gerald Gerlach, Lothar Wieler, Sebastian Suerbaum, Christine Josenhans BMC Genomics 2011, 12:584 (28 November 2011)

Abstract | Full text | PDF | PubMed

104.

Research article   Open Access

The association of DNA damage response and nucleotide level modulation with the antibacterial mechanism of the anti-folate drug Trimethoprim

Dipen P Sangurdekar, Zhigang Zhang, Arkady B Khodursky BMC Genomics 2011, 12:583 (28 November 2011)

Abstract | Full text | PDF | PubMed

105.

Research article   Open Access

Analysis of CpG methylation sites and CGI among human papillomavirus DNA genomes

Silvia C Galván, Martha Martínez-Salazar, Víctor M Galván, Rocío Méndez, Gibran T Díaz-Contreras, Moisés Alvarado-Hermida, Rogelio Alcántara-Silva, Alejandro García-Carrancá BMC Genomics 2011, 12:580 (25 November 2011)

Abstract | Full text | PDF | PubMed

106.

Research article   Open Access

Sequence of the hyperplastic genome of the naturally competent Thermus scotoductus SA-01

Kamini Gounder, Elzbieta Brzuszkiewicz, Heiko Liesegang, Antje Wollherr, Rolf Daniel, Gerhard Gottschalk, Oleg Reva, Benjamin Kumwenda, Malay Srivastava, Carlos Bricio, José Berenguer, Esta van Heerden, Derek Litthauer BMC Genomics 2011, 12:577 (24 November 2011)

Abstract | Full text | PDF | PubMed

107.

Research article   Open Access

Comparative genomics of the type VI secretion systems of Pantoea and Erwinia species reveals the presence of putative effector islands that may be translocated by the VgrG and Hcp proteins

Pieter De Maayer, Stephanus N Venter, Tim Kamber, Brion Duffy, Teresa A Coutinho, Theo HM Smits BMC Genomics 2011, 12:576 (24 November 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

108.

Research article   Open Access

Horizontal gene transfer in Histophilus somni and its role in the evolution of pathogenic strain 2336, as determined by comparative genomic analyses

Shivakumara Siddaramappa, Jean F Challacombe, Alison J Duncan, Allison F Gillaspy, Matthew Carson, Jenny Gipson, Joshua Orvis, Jeremy Zaitshik, Gentry Barnes, David Bruce, Olga Chertkov, J Chris Detter, Cliff S Han, Roxanne Tapia, Linda S Thompson, David W Dyer, Thomas J Inzana BMC Genomics 2011, 12:570 (23 November 2011)

Abstract | Full text | PDF | PubMed

109.

Research article   Open Access

The MetJ regulon in gammaproteobacteria determined by comparative genomics methods

Anne M Augustus, Leonard D Spicer BMC Genomics 2011, 12:558 (14 November 2011)

Abstract | Full text | PDF | PubMed

110.

Research article   Open Access

Characterization of RNase MRP RNA and novel snoRNAs from Giardia intestinalis and Trichomonas vaginalis

Xiaowei S Chen, David Penny, Lesley J Collins BMC Genomics 2011, 12:550 (6 November 2011)

Abstract | Full text | PDF | PubMed

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