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Comparative and evolutionary genomics

This section covers comparative genomic studies and novel methods, including phylogenetic analyses, evolutionary genomics and all studies with a cross-taxonomic focus.

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1.

Research article   Open Access

Frequent loss of lineages and deficient duplications accounted for low copy number of disease resistance genes in Cucurbitaceae

Xiao Lin, Yu Zhang, Hanhui Kuang, Jiongjiong Chen BMC Genomics 2013, 14:335 (17 May 2013)

Abstract | Provisional PDF | PubMed

2.

Research article   Open Access

Short and long-term genome stability analysis of prokaryotic genomes

Matteo Brilli, Pietro Liò, Vincent Lacroix, Marie-France Sagot BMC Genomics 2013, 14:309 (8 May 2013)

Abstract | Provisional PDF | PubMed

3.

Research article   Open Access

Origins of amyloid-β

William G Tharp, Indra Sarkar BMC Genomics 2013, 14:290 (30 April 2013)

Abstract | Full text | PDF | PubMed

4.

Research article   Open Access

The Nocardia cyriacigeorgica GUH-2 genome shows ongoing adaptation of an environmental Actinobacteria to a pathogen's lifestyle

Anthony Zoropogui, Petar Pujic, Philippe Normand, Valérie Barbe, Patrick Belli, Arnault Graindorge, David Roche, David Vallenet, Sophie Mangenot, Patrick Boiron, Véronica Rodriguez-Nava, Sebastien Ribun, Yves Richard, Benoit Cournoyer, Didier Blaha BMC Genomics 2013, 14:286 (27 April 2013)

Abstract | Provisional PDF | PubMed

5.

Research article   Open Access

Unscrambling butterfly oogenesis

Jean-Michel Carter, Simon C Baker, Ryan Pink, David RF Carter, Aiden Collins, Jeremie Tomlin, Melanie Gibbs, Casper J Breuker BMC Genomics 2013, 14:283 (26 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

6.

Research article   Open Access Highly Accessed

Comparative analysis of fungal genomes reveals different plant cell wall degrading capacity in fungi

Zhongtao Zhao, Huiquan Liu, Chenfang Wang, Jin-Rong Xu BMC Genomics 2013, 14:274 (23 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

7.

Research article   Open Access Highly Accessed

Genome analyses of the wheat yellow (stripe) rust pathogen Puccinia striiformis f. sp. tritici reveal polymorphic and haustorial expressed secreted proteins as candidate effectors

Dario Cantu, Vanesa Segovia, Daniel MacLean, Rosemary Bayles, Xianming Chen, Sophien Kamoun, Jorge Dubcovsky, Diane GO Saunders, Cristobal Uauy BMC Genomics 2013, 14:270 (22 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

8.

Research article   Open Access

Novel genomes and genome constitutions identified by GISH and 5S rDNA and knotted1 genomic sequences in the genus Setaria

Meicheng Zhao, Hui Zhi, Andrew N Doust, Wei Li, Yongfang Wang, Haiquan Li, Guanqing Jia, Yongqiang Wang, Ning Zhang, Xianmin Diao BMC Genomics 2013, 14:244 (11 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

9.

Research article   Open Access

Reevaluation of the evolutionary events within recA/RAD51 phylogeny

Sree V Chintapalli, Gaurav Bhardwaj, Jagadish Babu, Loukia Hadjiyianni, Yoojin Hong, George K Todd, Casey A Boosalis, Zhenhai Zhang, Xiaofan Zhou, Hong Ma, Andriy Anishkin, Damian B van Rossum, Randen L Patterson BMC Genomics 2013, 14:240 (10 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

10.

Research article   Open Access

Molecular cloning of doublesex genes of four cladocera (water flea) species

Kenji Toyota, Yasuhiko Kato, Masaru Sato, Naomi Sugiura, Shinichi Miyagawa, Hitoshi Miyakawa, Hajime Watanabe, Shigeto Oda, Yukiko Ogino, Chizue Hiruta, Takeshi Mizutani, Norihisa Tatarazako, Susanne Paland, Craig Jackson, John K Colbourne, Taisen Iguchi BMC Genomics 2013, 14:239 (10 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

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