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	1. 9047 Accesses	Research article Gene expression analysis of Drosophilaa Manf mutants reveals perturbations in membrane traffic and major metabolic changes Mari Palgi, Dario Greco, Riitta Lindström, Petri Auvinen, Tapio I Heino BMC Genomics 2012, 13:134 (11 April 2012) Abstract \| Full text \| PDF \| PubMed
	2. 5594 Accesses	Research article A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers Michael A Quail, Miriam Smith, Paul Coupland, Thomas D Otto, Simon R Harris, Thomas R Connor, Anna Bertoni, Harold P Swerdlow, Yong Gu BMC Genomics 2012, 13:341 (24 July 2012) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary Sequencing of four microbial genomes with widely differing GC content is compared on performance using three major new platforms: Ion Torrent PGM, Pacific Biosciences RS, and illumina MiSeq versus Illumina HiSeq system.
	3. 1844 Accesses	Research article Comparative analysis of fungal genomes reveals different plant cell wall degrading capacity in fungi Zhongtao Zhao, Huiquan Liu, Chenfang Wang, Jin-Rong Xu BMC Genomics 2013, 14:274 (23 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	4. 1778 Accesses	Research article Genome analyses of the wheat yellow (stripe) rust pathogen Puccinia striiformis f. sp. tritici reveal polymorphic and haustorial expressed secreted proteins as candidate effectors Dario Cantu, Vanesa Segovia, Daniel MacLean, Rosemary Bayles, Xianming Chen, Sophien Kamoun, Jorge Dubcovsky, Diane GO Saunders, Cristobal Uauy BMC Genomics 2013, 14:270 (22 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	5. 1765 Accesses	Research article Gene promoters show chromosome-specificity and reveal chromosome territories in humans Paul Gagniuc, Constantin Ionescu-Tirgoviste BMC Genomics 2013, 14:278 (24 April 2013) Abstract \| Provisional PDF \| PubMed
	6. 1613 Accesses	Research article LEA (Late Embryogenesis Abundant) proteins and their encoding genes in Arabidopsis thaliana Michaela Hundertmark, Dirk K Hincha BMC Genomics 2008, 9:118 (4 March 2008) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	7. 1462 Accesses	Methodology article A data-driven approach to preprocessing Illumina 450K methylation array data Ruth Pidsley, Chloe C Y Wong, Manuela Volta, Katie Lunnon, Jonathan Mill, Leonard C Schalkwyk BMC Genomics 2013, 14:293 (1 May 2013) Abstract \| Provisional PDF \| PubMed
	8. 1321 Accesses	Research article Whole-transcriptome, high-throughput RNA sequence analysis of the bovine macrophage response to Mycobacterium bovis infection in vitro Nicolas C Nalpas, Stephen DE Park, David A Magee, Maria Taraktsoglou, John A Browne, Kevin M Conlon, Kévin Rue-Albrecht, Kate E Killick, Karsten Hokamp, Amanda J Lohan, Brendan J Loftus, Eamonn Gormley, Stephen V Gordon, David E MacHugh BMC Genomics 2013, 14:230 (8 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	9. 1309 Accesses	Research article Strand-specific RNA-seq reveals widespread occurrence of novel cis-natural antisense transcripts in rice Tingting Lu, Chuanrang Zhu, Guojun Lu, Yunli Guo, Yan Zhou, Zhiyong Zhang, Yan Zhao, Wenjun Li, Ying Lu, Weihua Tang, Qi Feng, Bin Han BMC Genomics 2012, 13:721 (22 December 2012) Abstract \| Full text \| PDF \| PubMed
	10. 1311 Accesses	Software ContigScape: a Cytoscape plugin facilitating microbial genome gap closing Biao Tang, Qi Wang, Minjun Yang, Feng Xie, Yongqiang Zhu, Ying Zhuo, Shengyue Wang, Hong Gao, Xiaoming Ding, Lixin Zhang, Guoping Zhao, Huajun Zheng BMC Genomics 2013, 14:289 (30 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	11. 1276 Accesses	Research article Transcriptomic analysis of differentially expressed genes during anther development in genetic male sterile and wild type cotton by digital gene-expression profiling Mingming Wei, Meizhen Song, Shuli Fan, Shuxun Yu BMC Genomics 2013, 14:97 (12 February 2013) Abstract \| Full text \| PDF \| PubMed
	12. 1264 Accesses	Research article Transcriptome analysis of Sacha Inchi (Plukenetia volubilis L.) seeds at two developmental stages Xiaojuan Wang, Ronghua Xu, Ruling Wang, Aizhong Liu BMC Genomics 2012, 13:716 (20 December 2012) Abstract \| Full text \| PDF \| PubMed
	13. 1242 Accesses	Methodology article Simultaneous miRNA and mRNA transcriptome profiling of human myoblasts reveals a novel set of myogenic differentiation-associated miRNAs and their target genes Petr Dmitriev, Ana Barat, Anna Polesskaya, Mary J O’Connell, Thomas Robert, Philippe Dessen, Thomas A Walsh, Vladimir Lazar, Ahmed Turki, Gilles Carnac, Dalila Laoudj-Chenivesse, Marc Lipinski, Yegor S Vassetzky BMC Genomics 2013, 14:265 (18 April 2013) Abstract \| Full text \| PDF \| PubMed
	14. 1236 Accesses	Research article Integrated miRNA, mRNA and protein expression analysis reveals the role of post-transcriptional regulation in controlling CHO cell growth rate Colin Clarke, Michael Henry, Padraig Doolan, Shane Kelly, Sinead Aherne, Noelia Sanchez, Paul Kelly, Paula Kinsella, Laura Breen, Stephen F Madden, Lin Zhang, Mark Leonard, Martin Clynes, Paula Meleady, Niall Barron BMC Genomics 2012, 13:656 (21 November 2012) Abstract \| Full text \| PDF \| PubMed
	15. 1180 Accesses	Research article Characterization of human plasma-derived exosomal RNAs by deep sequencing Xiaoyi Huang, Tiezheng Yuan, Michael Tschannen, Zhifu Sun, Howard Jacob, Meijun Du, Meihua Liang, Rachel L Dittmar, Yong Liu, Mingyu Liang, Manish Kohli, Stephen N Thibodeau, Lisa Boardman, Liang Wang BMC Genomics 2013, 14:319 (10 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	16. 1165 Accesses	Research article Transcriptomic analysis of ‘Suli’ pear (Pyrus pyrifolia white pear group) buds during the dormancy by RNA-Seq Guoqin Liu, Wanshun Li, Penghua Zheng, Tong Xu, Lijuan Chen, Dongfeng Liu, Sayed Hussain, Yuanwen Teng BMC Genomics 2012, 13:700 (12 December 2012) Abstract \| Full text \| PDF \| PubMed
	17. 1140 Accesses	Research article Transcriptomic profiling of the salt-stress response in the wild recretohalophyte Reaumuria trigyna Zhen-hua Dang, Lin-lin Zheng, Jia Wang, Zhe Gao, Shu-biao Wu, Zhi Qi, Ying-chun Wang BMC Genomics 2013, 14:29 (16 January 2013) Abstract \| Full text \| PDF \| PubMed
	18. 1117 Accesses	Research article Genome-wide association study of sleep in Drosophila melanogaster Susan T Harbison, Lenovia J McCoy, Trudy FC Mackay BMC Genomics 2013, 14:281 (25 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	19. 1105 Accesses	Research article Mapping of pigmentation QTL on an anchored genome assembly of the cichlid fish, Metriaclima zebra Claire T O¿Quin, Alexi C Drilea, Matthew A Conte, Thomas D Kocher BMC Genomics 2013, 14:287 (27 April 2013) Abstract \| Provisional PDF \| PubMed
	20. 1097 Accesses	Research article A comparison across non-model animals suggests an optimal sequencing depth for de novo transcriptome assembly Warren R Francis, Lynne M Christianson, Rainer Kiko, Meghan L Powers, Nathan C Shaner, Steven H D Haddock BMC Genomics 2013, 14:167 (12 March 2013) Abstract \| Full text \| PDF \| PubMed
	21. 1092 Accesses	Research article Genome sequencing of bacteria: sequencing, de novo assembly and rapid analysis using open source tools Veljo Kisand, Teresa Lettieri BMC Genomics 2013, 14:211 (1 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	22. 1083 Accesses	Expression of concern Expression of concern: subfunctionalization reduces the fitness cost of gene duplication in humans by buffering dosage imbalances Maria K Kowalczuk, Shreeya Nanda, Elizabeth C Moylan BMC Genomics 2013, 14:260 (17 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	23. 1075 Accesses	Research article Pause-melting misalignment: a novel model for the birth and motif indel of tandem repeats in the mitochondrial genome Wei Shi, Xiao-Yu Kong, Zhong-Ming Wang, Shan-Shan Yu, Hai-Xia Chen, Elizabeth A De Stasio BMC Genomics 2013, 14:103 (15 February 2013) Abstract \| Full text \| PDF \| PubMed
	24. 1069 Accesses	Research article A microbial detection array (MDA) for viral and bacterial detection Shea N Gardner, Crystal J Jaing, Kevin S McLoughlin, Tom R Slezak BMC Genomics 2010, 11:668 (25 November 2010) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	25. 1079 Accesses	Research article Sequencing platform and library preparation choices impact viral metagenomes Sergei A Solonenko, J Ignacio-Espinoza, Adriana Alberti, Corinne Cruaud, Steven Hallam, Kostas Konstantinidis, Gene Tyson, Patrick Wincker, Matthew B Sullivan BMC Genomics 2013, 14:320 (10 May 2013) Abstract \| Full text \| PDF \| PubMed