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	1.	Methodology article A high-throughput strategy for screening of bacterial artificial chromosome libraries and anchoring of clones on a genetic map constructed with single nucleotide polymorphisms Ming-Cheng Luo, Kenong Xu, Yaqin Ma, Karin R Deal, Charles M Nicolet, Jan Dvorak BMC Genomics 2009, 10:28 (18 January 2009) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	2.	Methodology article Identification of response-modulated genetic interactions by sensitivity-based epistatic analysis Cory Batenchuk, Lioudmila Tepliakova, Mads Kærn BMC Genomics 2010, 11:493 (10 September 2010) Abstract \| Full text \| PDF \| PubMed
	3.	Research article An evolutionary consequence of dosage compensation on Drosophila melanogaster female X-chromatin structure? Yu Zhang, Brian Oliver BMC Genomics 2010, 11:6 (5 January 2010) Abstract \| Full text \| PDF \| PubMed
	4.	Research article Comparative genomics of four closely related Clostridium perfringens bacteriophages reveals variable evolution among core genes with therapeutic potential Brian B Oakley, Eldin Talundzic, Cesar A Morales, Kelli L Hiett, Gregory R Siragusa, Nikolay V Volozhantsev, Bruce S Seal BMC Genomics 2011, 12:282 (1 June 2011) Abstract \| Full text \| PDF \| PubMed
	5.	Research article Determination of the melon chloroplast and mitochondrial genome sequences reveals that the largest reported mitochondrial genome in plants contains a significant amount of DNA having a nuclear origin Luis Rodríguez-Moreno, Víctor M González, Andrej Benjak, M Carmen Martí, Pere Puigdomènech, Miguel A Aranda, Jordi Garcia-Mas BMC Genomics 2011, 12:424 (20 August 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	6.	Research article Deep sequencing reveals as-yet-undiscovered small RNAs in Escherichia coli Atsuko Shinhara, Motomu Matsui, Kiriko Hiraoka, Wataru Nomura, Reiko Hirano, Kenji Nakahigashi, Masaru Tomita, Hirotada Mori, Akio Kanai BMC Genomics 2011, 12:428 (24 August 2011) Abstract \| Full text \| PDF \| PubMed
	7.	Research article Subfunctionalization reduces the fitness cost of gene duplication in humans by buffering dosage imbalances Ariel Fernández, Yun-Huei Tzeng, Sze-Bi Hsu BMC Genomics 2011, 12:604 (14 December 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| 1 comment
	8.	Methodology article A transcriptome map of perennial ryegrass (Lolium perenne L.) Bruno Studer, Stephen Byrne, Rasmus O Nielsen, Frank Panitz, Christian Bendixen, Md Islam, Matthias Pfeifer, Thomas Lübberstedt, Torben Asp BMC Genomics 2012, 13:140 (18 April 2012) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	9.	Software NetWalker: a contextual network analysis tool for functional genomics Kakajan Komurov, Serkan Dursun, Serkan Erdin, Prahlad T Ram BMC Genomics 2012, 13:282 (25 June 2012) Abstract \| Full text \| PDF \| PubMed
	10.	Research article A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers Michael A Quail, Miriam Smith, Paul Coupland, Thomas D Otto, Simon R Harris, Thomas R Connor, Anna Bertoni, Harold P Swerdlow, Yong Gu BMC Genomics 2012, 13:341 (24 July 2012) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary Sequencing of four microbial genomes with widely differing GC content is compared on performance using three major new platforms: Ion Torrent PGM, Pacific Biosciences RS, and illumina MiSeq versus Illumina HiSeq system.
	11.	Research article Comparison of whole-genome prediction models for traits with contrasting genetic architecture in a diversity panel of maize inbred lines Christian Riedelsheimer, Frank Technow, Albrecht E Melchinger BMC Genomics 2012, 13:452 (4 September 2012) Abstract \| Full text \| PDF \| PubMed
	12.	Methodology article MMpred: functional miRNA – mRNA interaction analyses by miRNA expression prediction Przemyslaw A Stempor, Michael Cauchi, Paul Wilson BMC Genomics 2012, 13:620 (14 November 2012) Abstract \| Full text \| PDF \| PubMed
	13.	Research article An integrated approach of comparative genomics and heritability analysis of pig and human on obesity trait: evidence for candidate genes on human chromosome 2 Jaemin Kim, Taeheon Lee, Tae-Hun Kim, Kyung-Tai Lee, Heebal Kim BMC Genomics 2012, 13:711 (19 December 2012) Abstract \| Full text \| PDF \| PubMed
	14.	Research article miRConnect 2.0: identification of oncogenic, antagonistic miRNA families in three human cancers Youjia Hua, Niels Larsen, Shanker Kalyana-Sundaram, Jørgen Kjems, Arul M Chinnaiyan, Marcus E Peter BMC Genomics 2013, 14:179 (15 March 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	15.	Research article Patterns and evolution of ACGT repeat cis-element landscape across four plant genomes Rajesh Mehrotra, Sachin Sethi, Ipshita Zutshi, Purva Bhalothia, Sandhya Mehrotra BMC Genomics 2013, 14:203 (25 March 2013) Abstract \| Full text \| PDF \| PubMed
	16.	Research article Genome-wide co-expression analysis predicts protein kinases as important regulators of phosphate deficiency-induced root hair remodeling in Arabidopsis Ping Lan, Wenfeng Li, Wolfgang Schmidt BMC Genomics 2013, 14:210 (1 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	17.	Research article High natural gene expression variation in the reef-building coral Acropora millepora: potential for acclimative and adaptive plasticity Camila Granados-Cifuentes, Anthony J Bellantuono, Tyrone Ridgway, Ove Hoegh-Guldberg, Mauricio Rodriguez-Lanetty BMC Genomics 2013, 14:228 (8 April 2013) Abstract \| Full text \| PDF \| PubMed
	18.	Research article The significance of alternative transcripts for Caenorhabditis elegans transcription factor genes, based on expression pattern analysis Hannah L Craig, Julia Wirtz, Sophie Bamps, Colin T Dolphin, Ian A Hope BMC Genomics 2013, 14:249 (15 April 2013) Abstract \| Provisional PDF \| PubMed
	19.	Expression of concern Expression of concern: subfunctionalization reduces the fitness cost of gene duplication in humans by buffering dosage imbalances Maria K Kowalczuk, Shreeya Nanda, Elizabeth C Moylan BMC Genomics 2013, 14:260 (17 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	20.	Research article Dynamic recruitment of microRNAs to their mRNA targets in the regenerating liver Jonathan Schug, Lindsay B McKenna, Gabriel Walton, Nicholas Hand, Sarmistha Mukherjee, Kow Essuman, Zhongjie Shi, Yan Gao, Karen Markley, Momo Nakagawa, Vasumathi Kameswaran, Anastassios Vourekas, Joshua R Friedman, Klaus H Kaestner, Linda E Greenbaum BMC Genomics 2013, 14:264 (18 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	21.	Research article Genome-wide association study of sleep in Drosophila melanogaster Susan T Harbison, Lenovia J McCoy, Trudy FC Mackay BMC Genomics 2013, 14:281 (25 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	22.	Research article Origins of amyloid-β William G Tharp, Indra Sarkar BMC Genomics 2013, 14:290 (30 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	23.	Research article Milk yield responses to changes in milking frequency during early lactation are associated with coordinated and persistent changes in mammary gene expression Emma H Wall, Jeffrey P Bond, Thomas B McFadden BMC Genomics 2013, 14:296 (2 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	24.	Research article 5′ tRNA halves are present as abundant complexes in serum, concentrated in blood cells, and modulated by aging and calorie restriction Joseph M Dhahbi, Stephen R Spindler, Hani Atamna, Amy Yamakawa, Dario Boffelli, Patricia Mote, David IK Martin BMC Genomics 2013, 14:298 (2 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	25.	Methodology article Discovering putative prion sequences in complete proteomes using probabilistic representations of Q/N-rich domains Vladimir Espinosa Angarica, Salvador Ventura, Javier Sancho BMC Genomics 2013, 14:316 (10 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed