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Statistical and computational genetics Section edited by Rongling Wu

This section incorporates all aspects of statistical and computational genetics, including but not limited to: methods and applications for the analysis of all types of genetic data.

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1.

Research article   Open Access

A powerful latent variable method for detecting and characterizing gene-based gene-gene interaction on multiple quantitative traits

Fangyu Li, Jinghua Zhao, Zhongshang Yuan, Xiaoshuai Zhang, Jiadong Ji, Fuzhong Xue BMC Genetics 2013, 14:89 (23 September 2013)

Abstract | Full text | PDF | PubMed

2.

Methodology article   Open Access

An EM algorithm based on an internal list for estimating haplotype distributions of rare variants from pooled genotype data

Anthony YC Kuk, Xiang Li, Jinfeng Xu BMC Genetics 2013, 14:82 (13 September 2013)

Abstract | Full text | PDF | ePUB | PubMed

3.

Methodology article   Open Access

Genomic prediction of trait segregation in a progeny population: a case study of Japanese pear (Pyrus pyrifolia)

Hiroyoshi Iwata, Takeshi Hayashi, Shingo Terakami, Norio Takada, Toshihiro Saito, Toshiya Yamamoto BMC Genetics 2013, 14:81 (12 September 2013)

Abstract | Full text | PDF | ePUB | PubMed

4.

Methodology article   Open Access

Association analysis of complex diseases using triads, parent-child dyads and singleton monads

Ruzong Fan, Annie Lee, Zhaohui Lu, Aiyi Liu, James F Troendle, James L Mills BMC Genetics 2013, 14:78 (4 September 2013)

Abstract | Full text | PDF | ePUB | PubMed

5.

Methodology article   Open Access

Application of permanents of square matrices for DNA identification in multiple-fatality cases

Maiko Narahara, Keiji Tamaki, Ryo Yamada BMC Genetics 2013, 14:72 (21 August 2013)

Abstract | Full text | PDF | ePUB | PubMed

6.

Research article   Open Access

Computational cloning of drug target genes of a parasitic nematode, Oesophagostomum dentatum

Nathan M Romine, Richard J Martin, Jeffrey K Beetham BMC Genetics 2013, 14:55 (18 June 2013)

Abstract | Full text | PDF | ePUB | PubMed

7.

Methodology article   Open Access

iXora: exact haplotype inferencing and trait association

Filippo Utro, Niina Haiminen, Donald Livingstone, Omar E Cornejo, Stefan Royaert, Raymond J Schnell, Juan Motamayor, David N Kuhn, Parida Laxmi BMC Genetics 2013, 14:48 (6 June 2013)

Abstract | Full text | PDF | ePUB | PubMed

8.

Review   Open Access Highly Accessed

Candidate gene association studies: a comprehensive guide to useful in silico tools

Radhika Patnala, Judith Clements, Jyotsna Batra BMC Genetics 2013, 14:39 (9 May 2013)

Abstract | Full text | PDF | ePUB | PubMed |  Editor’s summary

A review of computational tools to select candidate genes for association studies provides a user-friendly guide to help identify disease-associated genetic variants, aimed particularly for use in the medical and cancer research communities.

9.

Research article   Open Access

Genotype imputation accuracy in a F2 pig population using high density and low density SNP panels

Jose L Gualdrón Duarte, Ronald O Bates, Catherine W Ernst, Nancy E Raney, Rodolfo JC Cantet, Juan P Steibel BMC Genetics 2013, 14:38 (8 May 2013)

Abstract | Full text | PDF | ePUB | PubMed

10.

Methodology article   Open Access

Detecting negative selection on recurrent mutations using gene genealogy

Kiyoshi Ezawa, Giddy Landan, Dan Graur BMC Genetics 2013, 14:37 (7 May 2013)

Abstract | Full text | PDF | ePUB | PubMed

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