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1.
960 Accesses
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Genetic analysis of ancestry, admixture and selection in Bolivian and Totonac populations of the New World
W Scott Watkins, Jinchuan Xing, Chad Huff, David J Witherspoon, Yuhua Zhang, Ugo A Perego, Scott R Woodward, Lynn B Jorde BMC Genetics 2012, 13:39 (20 May 2012)
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2.
827 Accesses
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Ancient DNA reveals kinship burial patterns of a pre-Columbian Andean community
Mateusz Baca, Karolina Doan, Maciej Sobczyk, Anna Stankovic, Piotr Weglenski BMC Genetics 2012, 13:30 (23 April 2012)
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Editor’s summary
Ancient DNA retrieved from 15-16th Century Andean burial mounds confirms historical and ethnographic evidence that communities were organized into social structures with extended family groups buried in a single grave.
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3.
675 Accesses
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Genome-wide linkage analyses identify Hfhl1 and Hfhl3 with frequency-specific effects on the hearing spectrum of NIH Swiss mice
James M Keller, Konrad Noben-Trauth BMC Genetics 2012, 13:32 (27 April 2012)
Abstract | Provisional PDF
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Editor’s summary
The identification of two quantitative trait loci (QTL) with frequency-specific effects on the hearing spectrum of NIH Swiss mice supports the hypothesis that frequency-specific hearing loss is the result of regionally specific gene activity in the cochlea.
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4.
655 Accesses
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Mcm2 phosphorylation and the response to replicative stress
Brent E Stead, Christopher J Brandl, Matthew K Sandre, Megan J Davey BMC Genetics 2012, 13:36 (7 May 2012)
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5.
569 Accesses
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EggLib: processing, analysis and simulation tools for population genetics and genomics
Stéphane De Mita, Mathieu Siol BMC Genetics 2012, 13:27 (11 April 2012)
Abstract | Full text | PDF | PubMed
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Editor’s summary
EggLib (Evolutionary Genetics and Genomics Library) is a new freely available software package providing a wide range of user-friendly computational tools for sequence data management and population genetic analyses on nucleotide sequence data.
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6.
544 Accesses
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A genetic dissection of breed composition and performance enhancement in the Alaskan sled dog
Heather J Huson, Heidi G Parker, Jonathan Runstadler, Elaine A Ostrander BMC Genetics 2010, 11:71 (22 July 2010)
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Editor’s summary
The Alaskan sled dog has been bred for performance rather than appearance and its genetic profile is comprised of several different lineages that have influenced the speed, endurance, and work ethic of this particular dog breed.
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7.
511 Accesses
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Genetic effects on coat colour in cattle: dilution of eumelanin and phaeomelanin pigments in an F2-Backcross Charolais × Holstein population
Beatriz Gutiérrez-Gil, Pamela Wiener, John L Williams BMC Genetics 2007, 8:56 (16 August 2007)
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8.
505 Accesses
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The distribution of a germline methylation marker suggests a regional mechanism of LINE-1 silencing by the piRNA-PIWI system
Martin I Sigurdsson, Albert V Smith, Hans T Bjornsson, Jon J Jonsson BMC Genetics 2012, 13:31 (24 April 2012)
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Editor’s summary
Significantly high densities of methylation-associated SNPs flanking clusters of RNAs that interact with regulatory PIWI genes (piRNAs), supports the hypothesis that the piRNA-PIWI system preferentially methylates sequences in close proximity to the piRNA clusters
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9.
505 Accesses
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Genetic variation analysis of the Bali street dog using microsatellites
Dawn N Irion, Alison L Schaffer, Sherry Grant, Alan N Wilton, Niels C Pedersen BMC Genetics 2005, 6:6 (8 February 2005)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
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10.
493 Accesses
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Male-like sexual behavior of female mouse lacking fucose mutarotase
Dongkyu Park, Dongwook Choi, Junghoon Lee, Dae-sik Lim, Chankyu Park BMC Genetics 2010, 11:62 (7 July 2010)
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Editor’s summary
Female mice that lack the fucose mutarotase (FucM) gene exhibit male-like sexual behavior and have less tyrosine hydroxylase positive neurons in the preoptic region of the brain than wild-type mice.
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11.
462 Accesses
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Genetic determinants of hair and eye colours in the Scottish and Danish populations
Jonas Mengel-From, Terence H Wong, Niels Morling, Jonathan L Rees, Ian J Jackson BMC Genetics 2009, 10:88 (30 December 2009)
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Editor’s summary
Scottish and Danish populations are famed for being ‘redheads' and a study of 33 genes shows that red hair color is associated with polymorphisms in melanin pigmentation and albinism genes, such as MC1R.
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12.
435 Accesses
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Most of the extant mtDNA boundaries in South and Southwest Asia were likely shaped during the initial settlement of Eurasia by anatomically modern humans
Mait Metspalu, Toomas Kivisild, Ene Metspalu, Jüri Parik, Georgi Hudjashov, Katrin Kaldma, Piia Serk, Monika Karmin, Doron M Behar, M Thomas P Gilbert, Phillip Endicott, Sarabjit Mastana, Surinder S Papiha, Karl Skorecki, Antonio Torroni, Richard Villems BMC Genetics 2004, 5:26 (31 August 2004)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
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13.
405 Accesses
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Discriminant analysis of principal components: a new method for the analysis of genetically structured populations
Thibaut Jombart, Sébastien Devillard, François Balloux BMC Genetics 2010, 11:94 (15 October 2010)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central | F1000 Biology
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Editor’s summary
A new multivariate method for the analysis of genetically structured populations, Discriminant Analysis of Principal Components (DAPC), is better able to characterize population subdivision, and performs faster, than current Bayesian clustering algorithms.
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14.
392 Accesses
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Ascertaining gene flow patterns in livestock populations of developing countries: a case study in Burkina Faso goat
Amadou Traoré, Isabel Álvarez, Iván Fernández, Lucía Pérez-Pardal, Adama Kaboré, Gisèlle MS Ouédraogo-Sanou, Yacouba Zaré, Hamidou H Tambourá, Félix Goyache BMC Genetics 2012, 13:35 (7 May 2012)
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15.
388 Accesses
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Genetic divergence and the genetic architecture of
complex traits in chromosome substitution strains of
mice
Sabrina H Spiezio, Toyoyuki Takada, Toshihiko Shiroishi, Joseph H Nadeau BMC Genetics 2012, 13:38 (18 May 2012)
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16.
373 Accesses
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Gene diversity, agroecological structure and introgression patterns among village chicken populations across North, West and Central Africa
Grégoire Leroy, Boniface B Kayang, Issaka AK Youssao, Chia V Yapi-Gnaoré, Richard Osei-Amponsah, N'Goran E Loukou, Jean-Claude Fotsa, Khalid Benabdeljelil, Bertrand Bed'hom, Michèle Tixier-Boichard, Xavier Rognon BMC Genetics 2012, 13:34 (7 May 2012)
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17.
363 Accesses
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Artificial neural networks modeling gene-environment
interaction
Frauke Günther, Iris Pigeot, Karin Bammann BMC Genetics 2012, 13:37 (14 May 2012)
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18.
359 Accesses
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Saudi Arabian Y-Chromosome diversity and its relationship with nearby regions
Khaled K Abu-Amero, Ali Hellani, Ana M González, Jose M Larruga, Vicente M Cabrera, Peter A Underhill BMC Genetics 2009, 10:59 (22 September 2009)
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19.
350 Accesses
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Genetic characterization of Plectorhinchus
mediterraneus yields important clues about genome
organization and evolution of multigene families
Manuel A Merlo, Tiziana Pacchiarini, Silvia Portela-Bens, Ismael Cross, Manuel Manchado, Laureana Rebordinos BMC Genetics 2012, 13:33 (30 April 2012)
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20.
321 Accesses
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Molecular diversity, population structure, and linkage disequilibrium in a worldwide collection of tobacco (Nicotiana tabacum L.) germplasm
Agostino Fricano, Nicolas Bakaher, Marcello Corvo, Pietro Piffanelli, Paolo Donini, Alessandra Stella, Nikolai V Ivanov, Carlo Pozzi BMC Genetics 2012, 13:18 (21 March 2012)
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21.
320 Accesses
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PGA: power calculator for case-control genetic association analyses
Idan Menashe, Philip S Rosenberg, Bingshu E Chen BMC Genetics 2008, 9:36 (13 May 2008)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
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Editor’s summary
Power for Genetic Association analyses (PGA) is a new user-friendly software package for calculating statistical power, in particular sample size and minimum detectable risk, in case-control genetic-association studies using SNP markers in unrelated subjects.
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22.
303 Accesses
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Genome-wide association study identified three major QTL for carcass weight including the PLAG1-CHCHD7 QTN for stature in Japanese Black cattle
Shota Nishimura, Toshio Watanabe, Kazunori Mizoshita, Ken Tatsuda, Tatsuo Fujita, Naoto Watanabe, Yoshikazu Sugimoto, Akiko Takasuga BMC Genetics 2012, 13:40 (20 May 2012)
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23.
291 Accesses
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Statistical properties of interval mapping methods on quantitative trait loci location: impact on QTL/eQTL analyses
Xiaoqiang Wang, Helene Gilbert, Carole Moreno, Olivier Filangi, Jean-Michel Elsen, Pascale Le Roy BMC Genetics 2012, 13:29 (20 April 2012)
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24.
289 Accesses
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Isolation by distance, web service
Jeffrey L Jensen, Andrew J Bohonak, Scott T Kelley BMC Genetics 2005, 6:13 (11 March 2005)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
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25.
288 Accesses
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Genomic scan of selective sweeps in thin and fat tail sheep breeds for identifying of candidate regions associated with fat deposition
Mohammad Hossein Moradi, Ardeshir Nejati-Javaremi, Mohammad Moradi-Shahrbabak, Ken G Dodds, John C McEwan BMC Genetics 2012, 13:10 (26 February 2012)
Abstract | Full text | PDF | PubMed
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Editor’s summary
Three novel regions associated with fat deposition in thin and fat tailed sheep have been identified from a genome-wide scan of selective sweeps using 50,000 SNPs from the Ovine HapMap project
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