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		Research article Efficiency of genomic selection using Bayesian multimarker models for traits selected to reflect a wide range of heritabilities and frequencies of detected quantitative traits loci in mice Dagmar NRG Kapell, Daniel Sorensen, Guosheng Su, Luc LG Janss, Cheryl J Ashworth, Rainer Roehe BMC Genetics 2012, 13:42 (31 May 2012) Abstract \| Provisional PDF
		Research article Genome-wide linkage analysis of QTL for growth and body composition employing the PorcineSNP60 BeadChip Ana Isabel Fernández, Dafne Pérez-Montarelo, Carmen Barragán, Yuliaxis Ramayo-Caldas, Noelia Ibañez-Escriche, Anna Castelló, Jose Luis Noguera, Luis Silió, Josep María Folch, M Carmen Rodríguez BMC Genetics 2012, 13:41 (20 May 2012) Abstract \| Provisional PDF \| PubMed
		Research article Genome-wide association study identified three major QTL for carcass weight including the PLAG1-CHCHD7 QTN for stature in Japanese Black cattle Shota Nishimura, Toshio Watanabe, Kazunori Mizoshita, Ken Tatsuda, Tatsuo Fujita, Naoto Watanabe, Yoshikazu Sugimoto, Akiko Takasuga BMC Genetics 2012, 13:40 (20 May 2012) Abstract \| Provisional PDF \| PubMed
		Research article Genetic analysis of ancestry, admixture and selection in Bolivian and Totonac populations of the New World W Scott Watkins, Jinchuan Xing, Chad Huff, David J Witherspoon, Yuhua Zhang, Ugo A Perego, Scott R Woodward, Lynn B Jorde BMC Genetics 2012, 13:39 (20 May 2012) Abstract \| Provisional PDF \| PubMed
		Research article Genetic divergence and the genetic architecture of complex traits in chromosome substitution strains of mice Sabrina H Spiezio, Toyoyuki Takada, Toshihiko Shiroishi, Joseph H Nadeau BMC Genetics 2012, 13:38 (18 May 2012) Abstract \| Provisional PDF \| PubMed
		Methodology article Artificial neural networks modeling gene-environment interaction Frauke Günther, Iris Pigeot, Karin Bammann BMC Genetics 2012, 13:37 (14 May 2012) Abstract \| Provisional PDF \| PubMed
		Research article Mcm2 phosphorylation and the response to replicative stress Brent E Stead, Christopher J Brandl, Matthew K Sandre, Megan J Davey BMC Genetics 2012, 13:36 (7 May 2012) Abstract \| Provisional PDF \| PubMed
		Research article Ascertaining gene flow patterns in livestock populations of developing countries: a case study in Burkina Faso goat Amadou Traoré, Isabel Álvarez, Iván Fernández, Lucía Pérez-Pardal, Adama Kaboré, Gisèlle MS Ouédraogo-Sanou, Yacouba Zaré, Hamidou H Tambourá, Félix Goyache BMC Genetics 2012, 13:35 (7 May 2012) Abstract \| Provisional PDF \| PubMed
		Research article Gene diversity, agroecological structure and introgression patterns among village chicken populations across North, West and Central Africa Grégoire Leroy, Boniface B Kayang, Issaka AK Youssao, Chia V Yapi-Gnaoré, Richard Osei-Amponsah, N'Goran E Loukou, Jean-Claude Fotsa, Khalid Benabdeljelil, Bertrand Bed'hom, Michèle Tixier-Boichard, Xavier Rognon BMC Genetics 2012, 13:34 (7 May 2012) Abstract \| Provisional PDF \| PubMed
		Research article Genetic characterization of Plectorhinchus mediterraneus yields important clues about genome organization and evolution of multigene families Manuel A Merlo, Tiziana Pacchiarini, Silvia Portela-Bens, Ismael Cross, Manuel Manchado, Laureana Rebordinos BMC Genetics 2012, 13:33 (30 April 2012) Abstract \| Provisional PDF \| PubMed
		Research article Genome-wide linkage analyses identify Hfhl1 and Hfhl3 with frequency-specific effects on the hearing spectrum of NIH Swiss mice James M Keller, Konrad Noben-Trauth BMC Genetics 2012, 13:32 (27 April 2012) Abstract \| Provisional PDF \| PubMed \| Editor’s summary The identification of two quantitative trait loci (QTL) with frequency-specific effects on the hearing spectrum of NIH Swiss mice supports the hypothesis that frequency-specific hearing loss is the result of regionally specific gene activity in the cochlea.
		Research article The distribution of a germline methylation marker suggests a regional mechanism of LINE-1 silencing by the piRNA-PIWI system Martin I Sigurdsson, Albert V Smith, Hans T Bjornsson, Jon J Jonsson BMC Genetics 2012, 13:31 (24 April 2012) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary Significantly high densities of methylation-associated SNPs flanking clusters of RNAs that interact with regulatory PIWI genes (piRNAs), supports the hypothesis that the piRNA-PIWI system preferentially methylates sequences in close proximity to the piRNA clusters
		Research article Ancient DNA reveals kinship burial patterns of a pre-Columbian Andean community Mateusz Baca, Karolina Doan, Maciej Sobczyk, Anna Stankovic, Piotr Weglenski BMC Genetics 2012, 13:30 (23 April 2012) Abstract \| Provisional PDF \| PubMed \| 1 comment \| Editor’s summary Ancient DNA retrieved from 15-16th Century Andean burial mounds confirms historical and ethnographic evidence that communities were organized into social structures with extended family groups buried in a single grave.
		Methodology article Statistical properties of interval mapping methods on quantitative trait loci location: impact on QTL/eQTL analyses Xiaoqiang Wang, Helene Gilbert, Carole Moreno, Olivier Filangi, Jean-Michel Elsen, Pascale Le Roy BMC Genetics 2012, 13:29 (20 April 2012) Abstract \| Provisional PDF \| PubMed
		Research article Comparative karyotype analysis and chromosome evolution in the genus Aplastodiscus (Cophomantini, Hylinae, Hylidae) Simone Lilian Gruber, Juliana Zina, Hideki Narimatsu, Célio Fernando Baptista Haddad, Sanae Kasahara BMC Genetics 2012, 13:28 (20 April 2012) Abstract \| Provisional PDF \| PubMed
		Software EggLib: processing, analysis and simulation tools for population genetics and genomics Stéphane De Mita, Mathieu Siol BMC Genetics 2012, 13:27 (11 April 2012) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary EggLib (Evolutionary Genetics and Genomics Library) is a new freely available software package providing a wide range of user-friendly computational tools for sequence data management and population genetic analyses on nucleotide sequence data.
		Research article Association between GNRHR, LHR and IGF1 polymorphisms and timing of puberty in male Angus cattle Juan P Lirón, Alberto J Prando, María E Fernández, María V Ripoli, Andrés Rogberg-Muñoz, Daniel E Goszczynski, Diego M Posik, Pilar Peral-García, Andrés Baldo, Guillermo Giovambattista BMC Genetics 2012, 13:26 (5 April 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Putative resistance gene markers associated with quantitative trait loci for fire blight resistance in Malus 'Robusta 5' accessions Susan E Gardiner, John L Norelli, Nihal de Silva, Gennaro Fazio, Andreas Peil, Mickael Malnoy, Mary Horner, Deepa Bowatte, Charmaine Carlisle, Claudia Wiedow, Yizhen Wan, Carole L Bassett, Angela M Baldo, Jean-Marc Celton, Klaus Richter, Herb S Aldwinckle, Vincent G M Bus BMC Genetics 2012, 13:25 (3 April 2012) Abstract \| Provisional PDF \| PubMed
		Software Enhancing the usability and performance of structured association mapping algorithms using automation, parallelization, and visualization in the GenAMap software system Ross E Curtis, Anuj Goyal, Eric P Xing BMC Genetics 2012, 13:24 (3 April 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Categorization of 77 dystrophin exons into 5 groups by a decision tree using indexes of splicing regulatory factors as decision markers Rusdy Malueka, Yutaka Takaoka, Mariko Yagi, Hiroyuki Awano, Tomoko Lee, Ery Dwianingsih, Atsushi Nishida, Yasuhiro Takeshima, Masafumi Matsuo BMC Genetics 2012, 13:23 (31 March 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Estimating demographic parameters from large-scale population genomic data using Approximate Bayesian Computation Sen Li, Mattias Jakobsson BMC Genetics 2012, 13:22 (27 March 2012) Abstract \| Provisional PDF \| PubMed
		Research article Genome-wide associations for milk production and somatic cell score in Holstein-Friesian cattle in Ireland Brian K Meredith, Francis J Kearney, Emma K Finlay, Daniel G Bradley, Alan G Fahey, Donagh P Berry, David J Lynn BMC Genetics 2012, 13:21 (26 March 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Genetic mapping of complex traits by minimizing integrated square errors Song Wu, Guifang Fu, Yunmei Chen, Zhong Wang, Rongling Wu BMC Genetics 2012, 13:20 (23 March 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Loss of nonsense mediated decay suppresses mutations in Saccharomyces cerevisiae TRA1 Stephanie Kvas, Gregory B Gloor, Christopher J Brandl BMC Genetics 2012, 13:19 (22 March 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Molecular diversity, population structure, and linkage disequilibrium in a worldwide collection of tobacco (Nicotiana tabacum L.) germplasm Agostino Fricano, Nicolas Bakaher, Marcello Corvo, Pietro Piffanelli, Paolo Donini, Alessandra Stella, Nikolai V Ivanov, Carlo Pozzi BMC Genetics 2012, 13:18 (21 March 2012) Abstract \| Full text \| PDF \| PubMed

	All
		Research article Efficiency of genomic selection using Bayesian multimarker models for traits selected to reflect a wide range of heritabilities and frequencies of detected quantitative traits loci in mice Dagmar NRG Kapell, Daniel Sorensen, Guosheng Su, Luc LG Janss, Cheryl J Ashworth, Rainer Roehe BMC Genetics 2012, 13:42 (31 May 2012) Abstract \| Provisional PDF
		Research article Genome-wide linkage analysis of QTL for growth and body composition employing the PorcineSNP60 BeadChip Ana Isabel Fernández, Dafne Pérez-Montarelo, Carmen Barragán, Yuliaxis Ramayo-Caldas, Noelia Ibañez-Escriche, Anna Castelló, Jose Luis Noguera, Luis Silió, Josep María Folch, M Carmen Rodríguez BMC Genetics 2012, 13:41 (20 May 2012) Abstract \| Provisional PDF \| PubMed
		Research article Genome-wide association study identified three major QTL for carcass weight including the PLAG1-CHCHD7 QTN for stature in Japanese Black cattle Shota Nishimura, Toshio Watanabe, Kazunori Mizoshita, Ken Tatsuda, Tatsuo Fujita, Naoto Watanabe, Yoshikazu Sugimoto, Akiko Takasuga BMC Genetics 2012, 13:40 (20 May 2012) Abstract \| Provisional PDF \| PubMed
		Research article Genetic analysis of ancestry, admixture and selection in Bolivian and Totonac populations of the New World W Scott Watkins, Jinchuan Xing, Chad Huff, David J Witherspoon, Yuhua Zhang, Ugo A Perego, Scott R Woodward, Lynn B Jorde BMC Genetics 2012, 13:39 (20 May 2012) Abstract \| Provisional PDF \| PubMed
		Research article Genetic divergence and the genetic architecture of complex traits in chromosome substitution strains of mice Sabrina H Spiezio, Toyoyuki Takada, Toshihiko Shiroishi, Joseph H Nadeau BMC Genetics 2012, 13:38 (18 May 2012) Abstract \| Provisional PDF \| PubMed
		Methodology article Artificial neural networks modeling gene-environment interaction Frauke Günther, Iris Pigeot, Karin Bammann BMC Genetics 2012, 13:37 (14 May 2012) Abstract \| Provisional PDF \| PubMed
		Research article Mcm2 phosphorylation and the response to replicative stress Brent E Stead, Christopher J Brandl, Matthew K Sandre, Megan J Davey BMC Genetics 2012, 13:36 (7 May 2012) Abstract \| Provisional PDF \| PubMed
		Research article Ascertaining gene flow patterns in livestock populations of developing countries: a case study in Burkina Faso goat Amadou Traoré, Isabel Álvarez, Iván Fernández, Lucía Pérez-Pardal, Adama Kaboré, Gisèlle MS Ouédraogo-Sanou, Yacouba Zaré, Hamidou H Tambourá, Félix Goyache BMC Genetics 2012, 13:35 (7 May 2012) Abstract \| Provisional PDF \| PubMed
		Research article Gene diversity, agroecological structure and introgression patterns among village chicken populations across North, West and Central Africa Grégoire Leroy, Boniface B Kayang, Issaka AK Youssao, Chia V Yapi-Gnaoré, Richard Osei-Amponsah, N'Goran E Loukou, Jean-Claude Fotsa, Khalid Benabdeljelil, Bertrand Bed'hom, Michèle Tixier-Boichard, Xavier Rognon BMC Genetics 2012, 13:34 (7 May 2012) Abstract \| Provisional PDF \| PubMed
		Research article Genetic characterization of Plectorhinchus mediterraneus yields important clues about genome organization and evolution of multigene families Manuel A Merlo, Tiziana Pacchiarini, Silvia Portela-Bens, Ismael Cross, Manuel Manchado, Laureana Rebordinos BMC Genetics 2012, 13:33 (30 April 2012) Abstract \| Provisional PDF \| PubMed
		Research article Genome-wide linkage analyses identify Hfhl1 and Hfhl3 with frequency-specific effects on the hearing spectrum of NIH Swiss mice James M Keller, Konrad Noben-Trauth BMC Genetics 2012, 13:32 (27 April 2012) Abstract \| Provisional PDF \| PubMed \| Editor’s summary The identification of two quantitative trait loci (QTL) with frequency-specific effects on the hearing spectrum of NIH Swiss mice supports the hypothesis that frequency-specific hearing loss is the result of regionally specific gene activity in the cochlea.
		Research article The distribution of a germline methylation marker suggests a regional mechanism of LINE-1 silencing by the piRNA-PIWI system Martin I Sigurdsson, Albert V Smith, Hans T Bjornsson, Jon J Jonsson BMC Genetics 2012, 13:31 (24 April 2012) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary Significantly high densities of methylation-associated SNPs flanking clusters of RNAs that interact with regulatory PIWI genes (piRNAs), supports the hypothesis that the piRNA-PIWI system preferentially methylates sequences in close proximity to the piRNA clusters
		Research article Ancient DNA reveals kinship burial patterns of a pre-Columbian Andean community Mateusz Baca, Karolina Doan, Maciej Sobczyk, Anna Stankovic, Piotr Weglenski BMC Genetics 2012, 13:30 (23 April 2012) Abstract \| Provisional PDF \| PubMed \| 1 comment \| Editor’s summary Ancient DNA retrieved from 15-16th Century Andean burial mounds confirms historical and ethnographic evidence that communities were organized into social structures with extended family groups buried in a single grave.
		Methodology article Statistical properties of interval mapping methods on quantitative trait loci location: impact on QTL/eQTL analyses Xiaoqiang Wang, Helene Gilbert, Carole Moreno, Olivier Filangi, Jean-Michel Elsen, Pascale Le Roy BMC Genetics 2012, 13:29 (20 April 2012) Abstract \| Provisional PDF \| PubMed
		Research article Comparative karyotype analysis and chromosome evolution in the genus Aplastodiscus (Cophomantini, Hylinae, Hylidae) Simone Lilian Gruber, Juliana Zina, Hideki Narimatsu, Célio Fernando Baptista Haddad, Sanae Kasahara BMC Genetics 2012, 13:28 (20 April 2012) Abstract \| Provisional PDF \| PubMed
		Software EggLib: processing, analysis and simulation tools for population genetics and genomics Stéphane De Mita, Mathieu Siol BMC Genetics 2012, 13:27 (11 April 2012) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary EggLib (Evolutionary Genetics and Genomics Library) is a new freely available software package providing a wide range of user-friendly computational tools for sequence data management and population genetic analyses on nucleotide sequence data.
		Research article Association between GNRHR, LHR and IGF1 polymorphisms and timing of puberty in male Angus cattle Juan P Lirón, Alberto J Prando, María E Fernández, María V Ripoli, Andrés Rogberg-Muñoz, Daniel E Goszczynski, Diego M Posik, Pilar Peral-García, Andrés Baldo, Guillermo Giovambattista BMC Genetics 2012, 13:26 (5 April 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Putative resistance gene markers associated with quantitative trait loci for fire blight resistance in Malus 'Robusta 5' accessions Susan E Gardiner, John L Norelli, Nihal de Silva, Gennaro Fazio, Andreas Peil, Mickael Malnoy, Mary Horner, Deepa Bowatte, Charmaine Carlisle, Claudia Wiedow, Yizhen Wan, Carole L Bassett, Angela M Baldo, Jean-Marc Celton, Klaus Richter, Herb S Aldwinckle, Vincent G M Bus BMC Genetics 2012, 13:25 (3 April 2012) Abstract \| Provisional PDF \| PubMed
		Software Enhancing the usability and performance of structured association mapping algorithms using automation, parallelization, and visualization in the GenAMap software system Ross E Curtis, Anuj Goyal, Eric P Xing BMC Genetics 2012, 13:24 (3 April 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Categorization of 77 dystrophin exons into 5 groups by a decision tree using indexes of splicing regulatory factors as decision markers Rusdy Malueka, Yutaka Takaoka, Mariko Yagi, Hiroyuki Awano, Tomoko Lee, Ery Dwianingsih, Atsushi Nishida, Yasuhiro Takeshima, Masafumi Matsuo BMC Genetics 2012, 13:23 (31 March 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Estimating demographic parameters from large-scale population genomic data using Approximate Bayesian Computation Sen Li, Mattias Jakobsson BMC Genetics 2012, 13:22 (27 March 2012) Abstract \| Provisional PDF \| PubMed
		Research article Genome-wide associations for milk production and somatic cell score in Holstein-Friesian cattle in Ireland Brian K Meredith, Francis J Kearney, Emma K Finlay, Daniel G Bradley, Alan G Fahey, Donagh P Berry, David J Lynn BMC Genetics 2012, 13:21 (26 March 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Genetic mapping of complex traits by minimizing integrated square errors Song Wu, Guifang Fu, Yunmei Chen, Zhong Wang, Rongling Wu BMC Genetics 2012, 13:20 (23 March 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Loss of nonsense mediated decay suppresses mutations in Saccharomyces cerevisiae TRA1 Stephanie Kvas, Gregory B Gloor, Christopher J Brandl BMC Genetics 2012, 13:19 (22 March 2012) Abstract \| Full text \| PDF \| PubMed
		Research article Molecular diversity, population structure, and linkage disequilibrium in a worldwide collection of tobacco (Nicotiana tabacum L.) germplasm Agostino Fricano, Nicolas Bakaher, Marcello Corvo, Pietro Piffanelli, Paolo Donini, Alessandra Stella, Nikolai V Ivanov, Carlo Pozzi BMC Genetics 2012, 13:18 (21 March 2012) Abstract \| Full text \| PDF \| PubMed