BMC Evolutionary Biology | Genome evolution and evolutionary systems biology section

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Genome evolution and evolutionary systems biology

This section considers studies on genome evolution and systems biology approaches to determining evolutionary processes.

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	1.	Research article Phylogeny, structural evolution and functional diversification of the plant PHOSPHATE1 gene family: a focus on Glycine max Lingli He, Man Zhao, Yan Wang, Junyi Gai, Chaoying He BMC Evolutionary Biology 2013, 13:103 (24 May 2013) Abstract \| Provisional PDF
	2.	Research article Characterisation of the potential function of SVA retrotransposons to modulate gene expression patterns Abigail L Savage, Vivien J Bubb, Gerome Breen, John P Quinn BMC Evolutionary Biology 2013, 13:101 (21 May 2013) Abstract \| Provisional PDF \| PubMed
	3.	Research article Origin, evolution and classification of type-3 copper proteins: lineage-specific gene expansions and losses across the Metazoa Felipe Aguilera, Carmel McDougall, Bernard M Degnan BMC Evolutionary Biology 2013, 13:96 (1 May 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	4.	Research article Evolution and variability of Solanum RanGAP2, a cofactor in the incompatible interaction between the resistance protein GPA2 and the Globodera pallida effector Gp-RBP-1 Jean Carpentier, Eric Grenier, Magalie Esquibet, Louis-Philippe Hamel, Peter Moffett, Maria J Manzanares-Dauleux, Marie-Claire Kerlan BMC Evolutionary Biology 2013, 13:87 (19 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	5.	Research article Convergent evolution of [D-Leucine¹] microcystin-LR in taxonomically disparate cyanobacteria Tânia Shishido, Ulla Kaasalainen, David P Fewer, Leo Rouhiainen, Jouni Jokela, Matti Wahlsten, Marli Fiore, João Yunes, Jouko Rikkinen, Kaarina Sivonen BMC Evolutionary Biology 2013, 13:86 (19 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	6.	Research article An evolutionary perspective on Elovl5 fatty acid elongase: comparison of Northern pike and duplicated paralogs from Atlantic salmon Greta Carmona-Antoñanzas, Douglas R Tocher, John B Taggart, Michael J Leaver BMC Evolutionary Biology 2013, 13:85 (19 April 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	7.	Research article To the beat of a different drum: determinants implicated in the asymmetric sequence divergence of Caenorhabditis elegans paralogs Vaishali Katju BMC Evolutionary Biology 2013, 13:73 (27 March 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	8.	Research article Diversification of Quiescin sulfhydryl oxidase in a preserved framework for redox relay Keren Limor-Waisberg, Shifra Ben-Dor, Deborah Fass BMC Evolutionary Biology 2013, 13:70 (19 March 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	9.	Research article Evolution of S-domain receptor-like kinases in land plants and origination of S-locus receptor kinases in Brassicaceae Shilai Xing, Mengya Li, Pei Liu BMC Evolutionary Biology 2013, 13:69 (19 March 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	10.	Research article Rates of molecular evolution and diversification in plants: chloroplast substitution rates correlate with species-richness in the Proteaceae David Duchene, Lindell Bromham BMC Evolutionary Biology 2013, 13:65 (13 March 2013) Abstract \| Full text \| PDF \| PubMed
	11.	Research article Evidence of recent natural selection on the Southeast Asian deletion (--^SEA) causing α-thalassemia in South China Qin-Wei Qiu, Dong-Dong Wu, Li-Hua Yu, Ti-Zhen Yan, Wen Zhang, Zhe-Tao Li, Yan-Hui Liu, Ya-Ping Zhang, Xiang-Min Xu BMC Evolutionary Biology 2013, 13:63 (11 March 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	12.	Research article A system-level, molecular evolutionary analysis of mammalian phototransduction Brandon M Invergo, Ludovica Montanucci, Hafid Laayouni, Jaume Bertranpetit BMC Evolutionary Biology 2013, 13:52 (23 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	13.	Research article The ancestral activation promiscuity of ADP-glucose pyrophosphorylases from oxygenic photosynthetic organisms Misty L Kuhn, Carlos M Figueroa, Alberto A Iglesias, Miguel A Ballicora BMC Evolutionary Biology 2013, 13:51 (21 February 2013) Abstract \| Full text \| PDF \| PubMed
	14.	Research article Convergent evolution of heat-inducibility during subfunctionalization of the Hsp70 gene family Sascha Krenek, Martin Schlegel, Thomas U Berendonk BMC Evolutionary Biology 2013, 13:49 (21 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	15.	Research article Evolution of a horizontally acquired legume gene, albumin 1, in the parasitic plant Phelipanche aegyptiaca and related species Yeting Zhang, Monica Fernandez-Aparicio, Eric K Wafula, Malay Das, Yuannian Jiao, Norman J Wickett, Loren A Honaas, Paula E Ralph, Martin F Wojciechowski, Michael P Timko, John I Yoder, James H Westwood, Claude W dePamphilis BMC Evolutionary Biology 2013, 13:48 (20 February 2013) Abstract \| Full text \| PDF \| PubMed
	16.	Research article Emergence of novel domains in proteins Macarena Toll-Riera, M Mar Albà BMC Evolutionary Biology 2013, 13:47 (20 February 2013) Abstract \| Full text \| PDF \| PubMed
	17.	Research article Gene make-up: rapid and massive intron gains after horizontal transfer of a bacterial α-amylase gene to Basidiomycetes Jean-Luc Da Lage, Manfred Binder, Aurélie Hua-Van, Štefan Janeček, Didier Casane BMC Evolutionary Biology 2013, 13:40 (13 February 2013) Abstract \| Full text \| PDF \| PubMed
	18.	Research article Horizontal gene transfer of epigenetic machinery and evolution of parasitism in the malaria parasite Plasmodium falciparum and other apicomplexans Sandeep P Kishore, John W Stiller, Kirk W Deitsch BMC Evolutionary Biology 2013, 13:37 (11 February 2013) Abstract \| Full text \| PDF \| PubMed
	19.	Research article Characterization of hairless (Hr) and FGF5 genes provides insights into the molecular basis of hair loss in cetaceans Zhuo Chen, Zhengfei Wang, Shixia Xu, Kaiya Zhou, Guang Yang BMC Evolutionary Biology 2013, 13:34 (9 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	20.	Research article A bioinformatic analysis of ribonucleotide reductase genes in phage genomes and metagenomes Bhakti Dwivedi, Bingjie Xue, Daniel Lundin, Robert A Edwards, Mya Breitbart BMC Evolutionary Biology 2013, 13:33 (7 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	21.	Research article Impact of constitutional copy number variants on biological pathway evolution Maria Poptsova, Samprit Banerjee, Omer Gokcumen, Mark A Rubin, Francesca Demichelis BMC Evolutionary Biology 2013, 13:19 (23 January 2013) Abstract \| Full text \| PDF \| PubMed
	22.	Research article The gain and loss of chromosomal integron systems in the Treponema species Yu-Wei Wu, Thomas G Doak, Yuzhen Ye BMC Evolutionary Biology 2013, 13:16 (22 January 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
	23.	Research article Consistent mutational paths predict eukaryotic thermostability Vera van Noort, Bettina Bradatsch, Manimozhiyan Arumugam, Stefan Amlacher, Gert Bange, Chris Creevey, Sebastian Falk, Daniel R Mende, Irmgard Sinning, Ed Hurt, Peer Bork BMC Evolutionary Biology 2013, 13:7 (10 January 2013) Abstract \| Full text \| PDF \| PubMed
	24.	Research article New approaches for unravelling reassortment pathways Victoria Svinti, James A Cotton, James O McInerney BMC Evolutionary Biology 2013, 13:1 (1 January 2013) Abstract \| Full text \| PDF \| PubMed
	25.	Research article Telomere dynamics in a long-lived bird, the barnacle goose Angela Pauliny, Kjell Larsson, Donald Blomqvist BMC Evolutionary Biology 2012, 12:257 (31 December 2012) Abstract \| Full text \| PDF \| PubMed