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Nucleic acids Section edited by Jörg Langowski and Sanford Leuba

This section incorporates all aspects of nucleic acid biophysics including: analysis of chromatin, genome biophysics, DNA replication, repair, and transcription.

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1.

Research article   Open Access

Drop drying on surfaces determines chemical reactivity - the specific case of immobilization of oligonucleotides on microarrays

Jens Sobek, Catharine Aquino, Wilfried Weigel, Ralph Schlapbach BMC Biophysics 2013, 6:8 (12 June 2013)

Abstract | Full text | PDF | ePUB | PubMed

2.

Research article   Open Access Highly Accessed

A biophysical model for transcription factories

Ana Z Canals-Hamann, Ricardo das Neves, Joyce E Reittie, Carlos Iñiguez, Shamit Soneji, Tariq Enver, Veronica J Buckle, Francisco J Iborra BMC Biophysics 2013, 6:2 (9 February 2013)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Chromatin can act as a multi-block copolymer with active-inactive monomers that spontaneously self-organize to form microdomains, demonstrating that geometrical constraints alone can potentially yield an organized transcription factory.

3.

Research article   Open Access Highly Accessed

Pulling chromatin apart: Unstacking or Unwrapping?

Jean Marc Victor, Jordanka Zlatanova, Maria Barbi, Julien Mozziconacci BMC Biophysics 2012, 5:21 (27 November 2012)

Abstract | Full text | PDF | PubMed |  Editor’s summary

A zig-zag model of chromatin fiber morphology is able to quantitatively explain the mechanical properties of chromatin under external stress, and provides an alternative explanation to the widespread solenoid model interpretation.

4.

Review   Open Access Highly Accessed

Hierarchies in eukaryotic genome organization: Insights from polymer theory and simulations

Balaji VS Iyer, Martin Kenward, Gaurav Arya BMC Biophysics 2011, 4:8 (15 April 2011)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Gaurav Arya and colleagues review results from state-of-the-art microscopy and chromosome conformation capture techniques that are being used to understand the three dimensional structure of the genome and the physical principles governing its folding.

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