Articles
Volume 14 Supplement 3
Selected proceedings from the Automated Function Prediction Meeting 2011
Proceedings
Automated Function Prediction SIG 2011 featuring the CAFA Challenge: Critical Assessment of Function Annotations
Vienna, Austria
15-16 July 2011
Edited by Iddo Friedberg and Predrag Radivojac
The Automated Function Prediction meeting at ISMB 2011 was supported by a US National Institutes of Health grant R13 HG006079-01A1 awarded to PR and a US Department of Energy, Office of Science grant DE-SC0006807TDD awarded to IF. The meeting organizers gratefully acknowledge the ongoing support of the International Society for Computational Biology to the Automated Function Prediction Special Interest Group.
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Proceedings
Domenico Cozzetto, Daniel WA Buchan, Kevin Bryson, David T Jones BMC Bioinformatics 2013, 14(Suppl 3):S1 (28 February 2013) |
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Proceedings
Meghana Chitale, Ishita K Khan, Daisuke Kihara BMC Bioinformatics 2013, 14(Suppl 3):S2 (28 February 2013) |
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Zheng Wang, Renzhi Cao, Jianlin Cheng BMC Bioinformatics 2013, 14(Suppl 3):S3 (28 February 2013) |
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Proceedings
How to inherit statistically validated annotation within BAR+ protein clusters Damiano Piovesan, Pier Luigi Martelli, Piero Fariselli, Giuseppe Profiti, Andrea Zauli, Ivan Rossi, Rita Casadio BMC Bioinformatics 2013, 14(Suppl 3):S4 (28 February 2013) |
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Protein function prediction using domain families Robert Rentzsch, Christine A Orengo BMC Bioinformatics 2013, 14(Suppl 3):S5 (28 February 2013) |
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Function prediction from networks of local evolutionary similarity in protein structure Serkan Erdin, Eric Venner, Andreas Lisewski, Olivier Lichtarge BMC Bioinformatics 2013, 14(Suppl 3):S6 (28 February 2013) |
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Homology-based inference sets the bar high for protein function prediction Tobias Hamp, Rebecca Kassner, Stefan Seemayer, Esmeralda Vicedo, Christian Schaefer, Dominik Achten, Florian Auer, Ariane Boehm, Tatjana Braun, Maximilian Hecht, Mark Heron, Peter Hönigschmid, Thomas A Hopf, Stefanie Kaufmann, Michael Kiening, Denis Krompass, Cedric Landerer, Yannick Mahlich, Manfred Roos, Burkhard Rost BMC Bioinformatics 2013, 14(Suppl 3):S7 (28 February 2013) |
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MS- Liang Lan, Nemanja Djuric, Yuhong Guo, Slobodan Vucetic BMC Bioinformatics 2013, 14(Suppl 3):S8 (28 February 2013) |
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Proceedings
A domain-centric solution to functional genomics via dcGO Hai Fang, Julian Gough BMC Bioinformatics 2013, 14(Suppl 3):S9 (28 February 2013) |
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Combining heterogeneous data sources for accurate functional annotation of proteins Artem Sokolov, Christopher Funk, Kiley Graim, Karin Verspoor, Asa Ben-Hur BMC Bioinformatics 2013, 14(Suppl 3):S10 (28 February 2013) |
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Functional inference by ProtoNet family tree: the uncharacterized proteome of Daphnia pulex Nadav Rappoport, Michal Linial BMC Bioinformatics 2013, 14(Suppl 3):S11 (28 February 2013) |
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Concomitant prediction of function and fold at the domain level with GO-based profiles Daniel Lopez, Florencio Pazos BMC Bioinformatics 2013, 14(Suppl 3):S12 (28 February 2013) |
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Proceedings
Protein function annotation with Structurally Aligned Local Sites of Activity (SALSAs) Zhouxi Wang, Pengcheng Yin, Joslynn S Lee, Ramya Parasuram, Srinivas Somarowthu, Mary Ondrechen BMC Bioinformatics 2013, 14(Suppl 3):S13 (28 February 2013) |
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Proceedings
Andrew Wong, Hagit Shatkay BMC Bioinformatics 2013, 14(Suppl 3):S14 (28 February 2013) |
