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BMC Bioinformatics publishes selected research, proceedings and collections of thematic reviews as supplements. All articles published in supplements are subject to peer review and are free to access online. The journal also publishes supplements containing meeting abstracts.

Volume 13 Supplement 17

Eleventh International Conference on Bioinformatics (InCoB2012): Bioinformatics

Proceedings

Asia Pacific Bioinformatics Network (APBioNet) Eleventh International Conference on Bioinformatics (InCoB2012)

Bangkok, Thailand

3-5 October 2012

Edited by Shoba Ranganathan, Christian Schönbach, Sissades Tongsima, Jonathan Chan and Tin Wee Tan

The articles in this supplement were supported by funding agencies as detailed in the Acknowledgement section of each article

| Conference website

Introduction   Open Access

InCoB2012 Conference: from biological data to knowledge to technological breakthroughs

Christian Schönbach, Sissades Tongsima, Jonathan Chan, Vladimir Brusic, Tin Tan, Shoba Ranganathan BMC Bioinformatics 2012, 13(Suppl 17):S1 (13 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Proceedings   Open Access

Functional relevance of dynamic properties of Dimeric NADP-dependent Isocitrate Dehydrogenases

Rithvik Vinekar, Chandra Verma, Indira Ghosh BMC Bioinformatics 2012, 13(Suppl 17):S2 (13 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Proceedings   Open Access

Prediction and analysis of protein solubility using a novel scoring card method with dipeptide composition

Hui-Ling Huang, Phasit Charoenkwan, Te-Fen Kao, Hua-Chin Lee, Fang-Lin Chang, Wen-Lin Huang, Shinn-Jang Ho, Li-Sun Shu, Wen-Liang Chen, Shinn-Ying Ho BMC Bioinformatics 2012, 13(Suppl 17):S3 (13 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Proceedings   Open Access

Discovery of a new class of inhibitors for the protein arginine deiminase type 4 (PAD4) by structure-based virtual screening

Chian Teo, Steven Shave, Adam Thean Chor, Abu Salleh, Mohd Basyaruddin Abdul Rahman, Malcolm D Walkinshaw, Bimo A Tejo BMC Bioinformatics 2012, 13(Suppl 17):S4 (13 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Proceedings   Open Access

Multiple virtual screening approaches for finding new Hepatitis c virus RNA-dependent RNA polymerase inhibitors: Structure-based screens and molecular dynamics for the pursue of new poly pharmacological inhibitors

Mahmoud ElHefnawi, Mohammad ElGamacy, Mohamed Fares BMC Bioinformatics 2012, 13(Suppl 17):S5 (13 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Proceedings   Open Access

Large-scale reverse docking profiles and their applications

Minho Lee, Dongsup Kim BMC Bioinformatics 2012, 13(Suppl 17):S6 (13 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Proceedings   Open Access

Sanjeevini: a freely accessible web-server for target directed lead molecule discovery

B Jayaram, Tanya Singh, Goutam Mukherjee, Abhinav Mathur, Shashank Shekhar, Vandana Shekhar BMC Bioinformatics 2012, 13(Suppl 17):S7 (13 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Proceedings   Open Access

An efficient algorithm for de novo predictions of biochemical pathways between chemical compounds

Masaomi Nakamura, Tsuyoshi Hachiya, Yutaka Saito, Kengo Sato, Yasubumi Sakakibara BMC Bioinformatics 2012, 13(Suppl 17):S8 (13 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Proceedings   Open Access

ChemEx: information extraction system for chemical data curation

Atima Tharatipyakul, Somrak Numnark, Duangdao Wichadakul, Supawadee Ingsriswang BMC Bioinformatics 2012, 13(Suppl 17):S9 (13 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Proceedings   Open Access

A hybrid method for the exact planted (l, d) motif finding problem and its parallelization

Mostafa M Abbas, Mohamed Abouelhoda, Hazem M Bahig BMC Bioinformatics 2012, 13(Suppl 17):S10 (13 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Proceedings   Open Access

Mapping small molecule binding data to structural domains

Felix A Kruger, Raghd Rostom, John P Overington BMC Bioinformatics 2012, 13(Suppl 17):S11 (13 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Proceedings   Open Access

A probabilistic coevolutionary biclustering algorithm for discovering coherent patterns in gene expression dataset

Je-Gun Joung, Soo-Jin Kim, Soo-Yong Shin, Byoung-Tak Zhang BMC Bioinformatics 2012, 13(Suppl 17):S12 (13 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Proceedings   Open Access

Prediction of nuclear proteins using nuclear translocation signals proposed by probabilistic latent semantic indexing

Emily Su, Jia-Ming Chang, Cheng-Wei Cheng, Ting-Yi Sung, Wen-Lian Hsu BMC Bioinformatics 2012, 13(Suppl 17):S13 (13 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Proceedings   Open Access

The study of muscle remodeling in Drosophila metamorphosis using in vivo microscopy and bioimage informatics

Rambabu Chinta, Joo Huang Tan, Martin Wasser BMC Bioinformatics 2012, 13(Suppl 17):S14 (13 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Proceedings   Open Access

Improved statistical model checking methods for pathway analysis

Chuan Hock Koh, Sucheendra K Palaniappan, PS Thiagarajan, Limsoon Wong BMC Bioinformatics 2012, 13(Suppl 17):S15 (13 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Proceedings   Open Access

Temporal dynamics of protein complexes in PPI Networks: a case study using yeast cell cycle dynamics

Sriganesh Srihari, Hon Wai Leong BMC Bioinformatics 2012, 13(Suppl 17):S16 (13 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Proceedings   Open Access

CMPF: Class-switching minimized pathfinding in metabolic networks

Kevin Lim, Limsoon Wong BMC Bioinformatics 2012, 13(Suppl 17):S17 (13 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Proceedings   Open Access

An automatic device for detection and classification of malaria parasite species in thick blood film

Saowaluck Kaewkamnerd, Chairat Uthaipibull, Apichart Intarapanich, Montri Pannarut, Sastra Chaotheing, Sissades Tongsima BMC Bioinformatics 2012, 13(Suppl 17):S18 (13 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Proceedings   Open Access

A linear-time algorithm for reconstructing zero-recombinant haplotype configuration on a pedigree

En-Yu Lai, Wei-Bung Wang, Tao Jiang, Kun-Pin Wu BMC Bioinformatics 2012, 13(Suppl 17):S19 (13 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Proceedings   Open Access

B-cell epitope prediction through a graph model

Liang Zhao, Limsoon Wong, Lanyuan Lu, Steven CH Hoi, Jinyan Li BMC Bioinformatics 2012, 13(Suppl 17):S20 (13 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

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