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BMC Bioinformatics publishes selected collections of research articles, conference proceedings, reviews and reports as supplements, which are free to access online. All articles published in supplements are subject to peer review; meeting abstracts undergo review and selection by the conference. Find out more about publishing a supplement with BioMed Central.

Volume 13 Supplement 12

UT-ORNL-KBRIN Bioinformatics Summit 2012

Meeting abstracts

11th Annual UT-ORNL-KBRIN Bioinformatics Summit 2012

Louisville, KY, USA

30 March - 1 April 2012

Edited by Eric C Rouchka, Robert M Flight and Hunter NB Moseley

Funding for the UT-ORNL-KBRIN Summit is provided in part by the University of Memphis Office of the Provost, Memphis Research Consortium, Kentucky Biomedical Research Infrastructure Network (KBRIN), University of Tennessee Center for Integrative and Translational Genomics, University of Tennessee Molecular Resource Center, UT-ORNL Science Alliance, and NIH grant P20RR16481.

Conference website

Meeting abstract   Open Access

Proceedings of the Eleventh Annual UT-ORNL-KBRIN Bioinformatics Summit 2012

Eric C Rouchka, Robert M Flight, Hunter NB Moseley BMC Bioinformatics 2012, 13(Suppl 12):A1 (31 July 2012)

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Meeting abstract   Open Access

Comprehensive characterization of an individual’s LINE-1 insertion profile using next generation sequencing data

Alexander Kemper, Musa Hindi, Kenneth S Ramos, Theodore S Kalbfleisch BMC Bioinformatics 2012, 13(Suppl 12):A2 (31 July 2012)

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Meeting abstract   Open Access

Regulation of cell proliferation and apoptosis by growth hormone during zebrafish auditory hair cell regeneration

Gopinath Rajadinakaran, Huifang Sun, Claire Rinehart, Eric Rouchka, Michael Smith BMC Bioinformatics 2012, 13(Suppl 12):A3 (31 July 2012)

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Meeting abstract   Open Access

RNASeq profiling of UTR expression during neuronal plasticity

Benjamin J Harrison, Robert M Flight, Abdallah Eteleeb, Eric C Rouchka, Jeffrey C Petruska BMC Bioinformatics 2012, 13(Suppl 12):A4 (31 July 2012)

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Meeting abstract   Open Access

The influence of sample biases on estimations of marine microbial diversity

Caroline Rempe, Charles R Budinoff, T Effler, Alison Buchan BMC Bioinformatics 2012, 13(Suppl 12):A5 (31 July 2012)

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Meeting abstract   Open Access

Meta-analysis of genes within QTLs of group A streptococcal sepsis and their expression QTLs reveal pathways modulating host differential response to streptococcal sepsis

Nourtan Abdeltawab, Lu Lu, Robert Williams, Malak Kotb BMC Bioinformatics 2012, 13(Suppl 12):A6 (31 July 2012)

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Meeting abstract   Open Access

QTLs for bone mineral density of femurs and tibias in recombinant inbred strains derived from C57BL/6J and DBA/2J inbred strains

Lishi Wang, Wenli Lu, Rachel Scheib, Yue Huang, XiaoYun Liu, Linda Myers, Lu Lu, Robert W Williams, Yan Jiao, Weikuan Gu BMC Bioinformatics 2012, 13(Suppl 12):A7 (31 July 2012)

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Meeting abstract   Open Access

Identification of hearing loss relevant genes in QTL on mouse chromosome 16

Fusheng Zhao, Yonghui Ma, Yan Jiao, Lishi Wang, Yue Huang, Wei Wei, Weikuan Gu BMC Bioinformatics 2012, 13(Suppl 12):A8 (31 July 2012)

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Meeting abstract   Open Access

Building better interdisciplinary scientists: creating graduate level courses to address the communication gap in interdisciplinary research

Denise R Koessler, Elizabeth G Johnson, Jordan M Utley, Harry A Richards, Cynthia B Peterson BMC Bioinformatics 2012, 13(Suppl 12):A9 (31 July 2012)

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Meeting abstract   Open Access

Identifying indispensable proteins of the type III secretion systems of Salmonella enterica serovar Typhimurium strain LT2

Chandrajit Lahiri, Pawar Shrikant, Radhakrishnan Sabarinathan, M Ashraf, Dipshikha Chakravortty BMC Bioinformatics 2012, 13(Suppl 12):A10 (31 July 2012)

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Meeting abstract   Open Access

Evaluation of gene expression in muscle in mouse model lacking of vitamin C synthesis

Yonghui Ma, Yan Jiao, Fusheng Zhao, Weikuan Gu BMC Bioinformatics 2012, 13(Suppl 12):A11 (31 July 2012)

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Meeting abstract   Open Access

Finding long protein products of alternatively spliced genes

Neil Moore, Jerzy W Jaromczyk, Christopher L Schardl BMC Bioinformatics 2012, 13(Suppl 12):A12 (31 July 2012)

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Meeting abstract   Open Access

System dynamics modeling of childhood obesity

Behrouz Madahian, Robert C Klesges, Lisa Klesges, Ramin Homayouni BMC Bioinformatics 2012, 13(Suppl 12):A13 (31 July 2012)

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Meeting abstract   Open Access

The development of a three-frame timeline for clinical concepts extracted from discharge summaries

Christopher Burton, Sujin Kim BMC Bioinformatics 2012, 13(Suppl 12):A14 (31 July 2012)

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Meeting abstract   Open Access

Research Electronic Data Capture (REDCap) - planning, collecting and managing data for clinical and translational research

Paul A Harris BMC Bioinformatics 2012, 13(Suppl 12):A15 (31 July 2012)

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Meeting abstract   Open Access

Temporal and spatial relationship of gene expression in the infarcted rat heart

Wenyuan Zhao, Tieqian Zhao, Yuanjian Chen, Yao Sun BMC Bioinformatics 2012, 13(Suppl 12):A16 (31 July 2012)

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Meeting abstract   Open Access

Evaluation of potential role of Atp5g3 in modulating alcohol preference and obesity

Yue Huang, Lishi Wang, Robert W Willliams, Weikuan Gu, Yan Jiao BMC Bioinformatics 2012, 13(Suppl 12):A17 (31 July 2012)

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Meeting abstract   Open Access

Evaluation of potential role of vitamin C in differential skeletal development between female and male mice using a mouse model

Yan Jiao, Yonghui Ma, Xiaoyun Liu, Weikuan Gu BMC Bioinformatics 2012, 13(Suppl 12):A18 (31 July 2012)

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Meeting abstract   Open Access

The effects of early-life risperidone administration on forebrain neurotrophin expression during adulthood

Matt Gannon, Rachel Stevens, Molly Griffith, Mark Bardgett BMC Bioinformatics 2012, 13(Suppl 12):A19 (31 July 2012)

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Meeting abstract   Open Access

The antibiotic resistance proteome of Acinetobacter baumanii MDR isolate MMC#4

Dana Marshall, Jianan Dong, Leon Dent, Siddharth Pratap BMC Bioinformatics 2012, 13(Suppl 12):A20 (31 July 2012)

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