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BMC Bioinformatics publishes selected research, proceedings and collections of thematic reviews as supplements. All articles published in supplements are subject to peer review and are free to access online. The journal also publishes supplements containing meeting abstracts.

Volume 11 Supplement 11

Proceedings of the 21st International Conference on Genome Informatics (GIW2010)

Research

The 21st International Conference on Genome Informatics (GIW2010)

Hangzhou, People's Republic of China

16-18 December 2010

Edited by Yixiang Shi, Luonan Chen, Yong Wang and Yixue Li

| Conference website

Research   Open Access

Association of tissue lineage and gene expression: conservatively and differentially expressed genes define common and special functions of tissues

Yao Yu, Tao Xu, Yongtao Yu, Pei Hao, Xuan Li BMC Bioinformatics 2010, 11(Suppl 11):S1 (14 December 2010)

Abstract | Full text | PDF | PubMed

Research   Open Access

Improved protein surface comparison and application to low-resolution protein structure data

Lee Sael, Daisuke Kihara BMC Bioinformatics 2010, 11(Suppl 11):S2 (14 December 2010)

Abstract | Full text | PDF | PubMed

Research   Open Access

Prior knowledge based mining functional modules from Yeast PPI networks with gene ontology

Liping Jing, Michael K Ng BMC Bioinformatics 2010, 11(Suppl 11):S3 (14 December 2010)

Abstract | Full text | PDF | PubMed

Research   Open Access

Integer programming-based method for grammar-based tree compression and its application to pattern extraction of glycan tree structures

Yang Zhao, Morihiro Hayashida, Tatsuya Akutsu BMC Bioinformatics 2010, 11(Suppl 11):S4 (14 December 2010)

Abstract | Full text | PDF | PubMed

Research   Open Access

TF-centered downstream gene set enrichment analysis: Inference of causal regulators by integrating TF-DNA interactions and protein post-translational modifications information

Qi Liu, Yejun Tan, Tao Huang, Guohui Ding, Zhidong Tu, Lei Liu, Yixue Li, Hongyue Dai, Lu Xie BMC Bioinformatics 2010, 11(Suppl 11):S5 (14 December 2010)

Abstract | Full text | PDF | PubMed

Research   Open Access

Herb network construction and co-module analysis for uncovering the combination rule of traditional Chinese herbal formulae

Shao Li, Bo Zhang, Duo Jiang, Yingying Wei, Ningbo Zhang BMC Bioinformatics 2010, 11(Suppl 11):S6 (14 December 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

Gene-centric association analysis for the correlation between the guanine-cytosine content levels and temperature range conditions of prokaryotic species

Hao Zheng, Hongwei Wu BMC Bioinformatics 2010, 11(Suppl 11):S7 (14 December 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

RecMotif: a novel fast algorithm for weak motif discovery

He Sun, Malcolm Low, Wen Hsu, Jagath C Rajapakse BMC Bioinformatics 2010, 11(Suppl 11):S8 (14 December 2010)

Abstract | Full text | PDF | PubMed

Research   Open Access

Large number of phosphotransferase genes in the Clostridium beijerinckii NCIMB 8052 genome and the study on their evolution

Yixiang Shi, Yi-Xue Li, Yuan-Yuan Li BMC Bioinformatics 2010, 11(Suppl 11):S9 (14 December 2010)

Abstract | Full text | PDF | PubMed

Research   Open Access

Accurate HLA type inference using a weighted similarity graph

Minzhu Xie, Jing Li, Tao Jiang BMC Bioinformatics 2010, 11(Suppl 11):S10 (14 December 2010)

Abstract | Full text | PDF | PubMed

Research   Open Access

MiRenSVM: towards better prediction of microRNA precursors using an ensemble SVM classifier with multi-loop features

Jiandong Ding, Shuigeng Zhou, Jihong Guan BMC Bioinformatics 2010, 11(Suppl 11):S11 (14 December 2010)

Abstract | Full text | PDF | PubMed

Research   Open Access

Detection and reconstruction of tandemly organized de novo copy number variations

Dan He, Nicholas Furlotte, Eleazar Eskin BMC Bioinformatics 2010, 11(Suppl 11):S12 (14 December 2010)

Abstract | Full text | PDF | PubMed

Research   Open Access

Revealing parasite influence in metabolic pathways in Apicomplexa infected patients

Tao Xu, Jie Ping, Yao Yu, Fudong Yu, Yongtao Yu, Pei Hao, Xuan Li BMC Bioinformatics 2010, 11(Suppl 11):S13 (14 December 2010)

Abstract | Full text | PDF | PubMed

Research   Open Access

The utility of mass spectrometry-based proteomic data for validation of novel alternative splice forms reconstructed from RNA-Seq data: a preliminary assessment

Kang Ning, Alexey I Nesvizhskii BMC Bioinformatics 2010, 11(Suppl 11):S14 (14 December 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

A novel parametric approach to mine gene regulatory relationship from microarray datasets

Wanlin Liu, Dong Li, Qijun Liu, Yunping Zhu, Fuchu He BMC Bioinformatics 2010, 11(Suppl 11):S15 (14 December 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

Sorting out inherent features of head-to-head gene pairs by evolutionary conservation

Yun-Qin Chen, Hui Yu, Yi-Xue Li, Yuan-Yuan Li BMC Bioinformatics 2010, 11(Suppl 11):S16 (14 December 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central


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