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1.
Learning smoothing models of copy number
profiles using breakpoint annotations
Toby Dylan Hocking, Gudrun Schleiermacher, Isabelle Janoueix-Lerosey, Valentina Boeva, Julie Cappo, Olivier Delattre, Francis Bach, Jean-Philippe Vert BMC Bioinformatics 2013, 14 :164 (22 May 2013)
Abstract | Provisional PDF
2.
Iterative rank-order normalization of gene expression microarray data
Eric A Welsh, Steven A Eschrich, Anders E Berglund, David A Fenstermacher BMC Bioinformatics 2013, 14 :153 (7 May 2013)
Abstract | Full text | PDF
| ePUB | PubMed
3.
A metadata-aware application for remote scoring and exchange of tissue microarray images
Lorna Morris, Andrew Tsui, Charles Crichton, Steve Harris, Peter H Maccallum, William J Howat, Jim Davies, James D Brenton, Carlos Caldas BMC Bioinformatics 2013, 14 :147 (1 May 2013)
Abstract | Full text | PDF
| PubMed
4.
Empirical Bayesian analysis of paired high-throughput sequencing data with a beta-binomial distribution
Thomas J Hardcastle, Krystyna A Kelly BMC Bioinformatics 2013, 14 :135 (23 April 2013)
Abstract | Full text | PDF
| PubMed
5.
How cyanobacteria pose new problems to old methods: challenges in microarray time series analysis
Robert Lehmann, Rainer Machné, Jens Georg, Manuela Benary, Ilka Axmann, Ralf Steuer BMC Bioinformatics 2013, 14 :133 (21 April 2013)
Abstract | Provisional PDF
| PubMed
6.
The impact of quantile and rank normalization procedures on the testing power of gene differential expression analysis
Xing Qiu, Hulin Wu, Rui Hu BMC Bioinformatics 2013, 14 :124 (11 April 2013)
Abstract | Full text | PDF
| PubMed
7.
Differential expression analysis for paired RNA-seq data
Lisa M Chung, John P Ferguson, Wei Zheng, Feng Qian, Vincent Bruno, Ruth R Montgomery, Hongyu Zhao BMC Bioinformatics 2013, 14 :110 (27 March 2013)
Abstract | Provisional PDF
| PubMed
8.
LASAGNA: A novel algorithm for transcription factor binding site alignment
Chih Lee, Chun-Hsi Huang BMC Bioinformatics 2013, 14 :108 (24 March 2013)
Abstract | Provisional PDF
| PubMed
9.
SMOTE for high-dimensional class-imbalanced data
Rok Blagus, Lara Lusa BMC Bioinformatics 2013, 14 :106 (22 March 2013)
Abstract | Full text | PDF
| ePUB | PubMed
10.
Adaptive filtering of microarray gene expression data based on Gaussian mixture decomposition
Michal Marczyk, Roman Jaksik, Andrzej Polanski, Joanna Polanska BMC Bioinformatics 2013, 14 :101 (20 March 2013)
Abstract | Full text | PDF
| ePUB | PubMed