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1.
Active Subnetwork Recovery with a Mechanism-Dependent Scoring Function; with application to Angiogenesis and Organogenesis studies
Ilana Lichtenstein, Michael A Charleston, Tiberio S Caetano, Jennifer R Gamble, Mathew A Vadas BMC Bioinformatics 2013, 14 :59 (21 February 2013)
Abstract | Provisional PDF
| PubMed
2.
A survey of protein interaction data and multigenic inherited disorders
Antonio Mora, Katerina Michalickova, Ian M Donaldson BMC Bioinformatics 2013, 14 :47 (11 February 2013)
Abstract | Provisional PDF
| PubMed
3.
Elucidating the crosstalk mechanism between IFN-gamma and IL-6 via mathematical modelling
Yun-feng Qi, Yan-xin Huang, Hong-yan Wang, Yu Zhang, Yong-li Bao, Lu-guo Sun, Yin Wu, Chun-lei Yu, Zhen-bo Song, Li-hua Zheng, Ying Sun, Guan-nan Wang, Yu-xin Li BMC Bioinformatics 2013, 14 :41 (6 February 2013)
Abstract | Provisional PDF
| PubMed
4.
Detecting recurrent gene mutation in interaction network context using multi-scale graph diffusion
Sepideh Babaei, Marc Hulsman, Marcel Reinders, Jeroen de Ridder BMC Bioinformatics 2013, 14 :29 (23 January 2013)
Abstract | Provisional PDF
| PubMed
5.
Genecentric: a package to uncover graph-theoretic structure in high-throughput epistasis data
Andrew Gallant, Mark D.M. Leiserson, Maxim Kachalov, Lenore J. Cowen, Benjamin J. Hescott BMC Bioinformatics 2013, 14 :23 (18 January 2013)
Abstract | Provisional PDF
| PubMed
6.
CySBGN: A Cytoscape plug-in to integrate SBGN maps
Emanuel J V Goncalves, Martijn v Iersel, Julio Saez-Rodriguez BMC Bioinformatics 2013, 14 :17 (16 January 2013)
Abstract | Provisional PDF
| PubMed
7.
Comparison of co-expression measures: mutual information, correlation, and model based indices
Lin Song, Peter Langfelder, Steve Horvath BMC Bioinformatics 2012, 13 :328 (9 December 2012)
Abstract | Full text | PDF
| PubMed
8.
On the contributions of topological features to transcriptional regulatory network robustness
Faiyaz Al Zamal, Derek Ruths BMC Bioinformatics 2012, 13 :318 (30 November 2012)
Abstract | Full text | PDF
| PubMed
9.
An assessment on epitope prediction methods for protozoa genomes
Daniela M Resende, Antônio M Rezende, Nesley JD Oliveira, Izabella CA Batista, Rodrigo Corrêa-Oliveira, Alexandre B Reis, Jeronimo C Ruiz BMC Bioinformatics 2012, 13 :309 (21 November 2012)
Abstract | Full text | PDF
| PubMed
10.
Effects of protein interaction data integration, representation and reliability on the use of network properties for drug target prediction
Antonio Mora, Ian M Donaldson BMC Bioinformatics 2012, 13 :294 (12 November 2012)
Abstract | Full text | PDF
| PubMed
