Articles
Volume 5 (2004) - April 2004
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Methodology article
A structural study for the optimisation of functional motifs encoded in protein sequences Allegra Via, Manuela Helmer-Citterich BMC Bioinformatics 2004, 5:50 (30 April 2004) |
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Research article
Christopher S Coffey, Patricia R Hebert, Marylyn D Ritchie, Harlan M Krumholz, J Michael Gaziano, Paul M Ridker, Nancy J Brown, Douglas E Vaughan, Jason H Moore BMC Bioinformatics 2004, 5:49 (30 April 2004) |
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Software
Visualising very large phylogenetic trees in three dimensional hyperbolic space Timothy Hughes, Young Hyun, David A Liberles BMC Bioinformatics 2004, 5:48 (29 April 2004) |
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Methodology article
Hybrid clustering for microarray image analysis combining intensity and shape features Jörg Rahnenführer, Daniel Bozinov BMC Bioinformatics 2004, 5:47 (29 April 2004) |
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Software
Guohui Zhou, Xinyu Wen, Hang Liu, Michael J Schlicht, Martin J Hessner, Peter J Tonellato, Milton W Datta BMC Bioinformatics 2004, 5:46 (29 April 2004) |
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Methodology article
A hybrid clustering approach to recognition of protein families in 114 microbial genomes Timothy J Harlow, J Peter Gogarten, Mark A Ragan BMC Bioinformatics 2004, 5:45 (29 April 2004) |
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Methodology article
Olga V Matveeva, Brian T Foley, Vladimir A Nemtsov, Raymond F Gesteland, Senya Matsufuji, John F Atkins, Aleksey Y Ogurtsov, Svetlana A Shabalina BMC Bioinformatics 2004, 5:44 (29 April 2004) |
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Software
BioBuilder as a database development and functional annotation platform for proteins J Daniel Navarro, Naveen Talreja, Suraj Peri, BM Vrushabendra, BP Rashmi, N Padma, Vineeth Surendranath, Chandra Jonnalagadda, PS Kousthub, Nandan Deshpande, K Shanker, Akhilesh Pandey BMC Bioinformatics 2004, 5:43 (20 April 2004) |
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Research article
Leah Barrera, Chris Benner, Yong-Chuan Tao, Elizabeth Winzeler, Yingyao Zhou BMC Bioinformatics 2004, 5:42 (20 April 2004) |
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Research article
Marc N Offman, Ramil N Nurtdinov, Mikhail S Gelfand, Dmitrij Frishman BMC Bioinformatics 2004, 5:41 (19 April 2004) |
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Software
Pegasys: software for executing and integrating analyses of biological sequences Sohrab P Shah, David YM He, Jessica N Sawkins, Jeffrey C Druce, Gerald Quon, Drew Lett, Grace XY Zheng, Tao Xu, BF Francis Ouellette BMC Bioinformatics 2004, 5:40 (19 April 2004) |
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Software
MolTalk – a programming library for protein structures and structure analysis Alexander V Diemand, Holger Scheib BMC Bioinformatics 2004, 5:39 (19 April 2004) |
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Research article
Predicting co-complexed protein pairs using genomic and proteomic data integration Lan V Zhang, Sharyl L Wong, Oliver D King, Frederick P Roth BMC Bioinformatics 2004, 5:38 (16 April 2004) A probabilistic decision tree approach to the prediction of co-complexed protein pairs in yeast has been developed, validated and shown to have some advantages over other methods.
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Research article
Structural characterization of genomes by large scale sequence-structure threading Artem Cherkasov, Steven JM Jones BMC Bioinformatics 2004, 5:37 (3 April 2004) |
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Methodology article
Ching Yu Huang, Joel Studebaker, Anton Yuryev, Jianping Huang, Kathryn E Scott, Jennifer Kuebler, Shobha Varde, Steven Alfisi, Craig A Gelfand, Mark Pohl, Michael T Boyce-Jacino BMC Bioinformatics 2004, 5:36 (2 April 2004) |
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Database
PASS2: an automated database of protein alignments organised as structural superfamilies Anirban Bhaduri, Ganesan Pugalenthi, Ramanathan Sowdhamini BMC Bioinformatics 2004, 5:35 (2 April 2004) |
