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Predicting protein-ATP binding sites from primary sequence through fusing bi-profile sampling of multi-view features
Ya-Nan Zhang, Dong-Jun Yu, Shu-Sen Li, Yong-Xian Fan, Yan Huang, Hong-Bin Shen BMC Bioinformatics 2012, 13:118 (31 May 2012)
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MergeAlign: improving multiple sequence alignment performance by dynamic reconstruction of consensus multiple sequence alignments.
Peter W Collingridge, Steven Kelly BMC Bioinformatics 2012, 13:117 (30 May 2012)
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OLSVis: an Animated, Interactive Visual Browser for Bio-ontologies
Steven Vercruysse, Aravind Venkatesan, Martin Kuiper BMC Bioinformatics 2012, 13:116 (30 May 2012)
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PyMS: a Python toolkit for processing of gas chromatography--mass spectrometry (GC-MS) data. Application and comparative study of selected tools
Sean O'Callaghan, David P DeSouza, Andrew Isaac, Qiao Wang, Luke Hodkinson, Moshe Olshansky, Tim Erwin, Bill Appelbe, Dedreia L Tull, Ute Roessner, Antony Bacic, Malcolm J McConville, Vladimir A Likic BMC Bioinformatics 2012, 13:115 (30 May 2012)
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Detection and correction of probe-level artefacts on microarrays
Tobias Petri, Evi Berchtold, Ralf Zimmer, Caroline C Friedel BMC Bioinformatics 2012, 13:114 (30 May 2012)
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Molecular Ecological Network Analyses
Ye Deng, Yihuei Jiang, Yunfeng Yang, Zhili He, Feng Luo, Jizhong Zhou BMC Bioinformatics 2012, 13:113 (30 May 2012)
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Comprehensive data-driven analysis of the impact of chemoinformatic structure on the genome-wide biological response profiles of cancer cells to 1159 drugs
Suleiman A Khan, Ali Faisal, John P Mpindi, Juuso A Parkkinen, Tuomo Kalliokoski, Antti Poso, Olli P Kallioniemi, Krister Wennerberg, Samuel Kaski BMC Bioinformatics 2012, 13:112 (30 May 2012)
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MetaDisorder: a meta-server for the prediction of intrinsic disorder in proteins
Lukasz P Kozlowski, Janusz M Bujnicki BMC Bioinformatics 2012, 13:111 (24 May 2012)
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TreeSnatcher plus: capturing phylogenetic trees
from images
Thomas Laubach, Arndt von Haeseler, Martin J. Lercher BMC Bioinformatics 2012, 13:110 (24 May 2012)
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Towards the identification of protein complexes and functional modules by integrating PPI network and gene expression
data
Min Li, Xuehong Wu, Jianxin Wang, Yi Pan BMC Bioinformatics 2012, 13:109 (23 May 2012)
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Extracting semantically enriched events from
biomedical literature
Makoto Miwa, Paul Thompson, John McNaught, Douglas B Kell, Sophia Ananiadou BMC Bioinformatics 2012, 13:108 (23 May 2012)
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Learning Sparse Representations for Fruit-Fly Gene Expression Pattern Image Annotation and Retrieval
Lei Yuan, Alexander Woodard, Shuiwang Ji, Yuan Jiang, Zhi-Hua Zhou, Sudhir Kumar, Jieping Ye BMC Bioinformatics 2012, 13:107 (23 May 2012)
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Natural product-likeness score revisited: an open-source,
open-data implementation
Kalai Vanii Jayaseelan, Pablo Moreno, Andreas Truszkowski, Peter Ertl, Christoph Steinbeck BMC Bioinformatics 2012, 13:106 (20 May 2012)
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Multiple structure alignment with msTALI
Paul Shealy, Homayoun Valafar BMC Bioinformatics 2012, 13:105 (20 May 2012)
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Profile-based short linear protein motif discovery.
Niall J Haslam, Denis C Shields BMC Bioinformatics 2012, 13:104 (18 May 2012)
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rCUR:an R package for CUR matrix
decomposition
Andras Bodor, Istvan Csabai, Michael W Mahoney, Norbert Solymosi BMC Bioinformatics 2012, 13:103 (17 May 2012)
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Workflows for microarray data processing in the Kepler
environment
Thomas Stropp, Timothy McPhillips, Bertram Ludaescher, Mark Bieda BMC Bioinformatics 2012, 13:102 (17 May 2012)
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MetaMapp: mapping and visualizing metabolomic
data by integrating information from biochemical
pathways and chemical and mass spectral similarity
Dinesh K Barupal, Pradeep K Haldiya, Gert Wohlgemuth, Tobias Kind, Shanker L Kothari, Kent E Pinkerton, Oliver Fiehn BMC Bioinformatics 2012, 13:99 (16 May 2012)
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MELTING, a flexible platform to predict the melting temperatures
of nucleic acids
Marine Dumousseau, Nicolas Rodriguez, Nick Juty, Nicolas Le Novère BMC Bioinformatics 2012, 13:101 (16 May 2012)
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Handling the data management needs of high-throughput sequencing data: SpeedGene, a compression algorithm for the efficient storage of genetic data
Dandi Qiao, Wai-Ki Yip, Christoph Lange BMC Bioinformatics 2012, 13:100 (16 May 2012)
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The Partitioned LASSO-Patternsearch Algorithm with Application
to Gene Expression Data
Weiliang Shi, Grace Wahba, Rafael A Irizarry, Hector Corrada Bravo, Stephen J Wright BMC Bioinformatics 2012, 13:98 (15 May 2012)
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Exploration of multivariate analysis in microbial coding sequence modeling
Tahir Mehmood, Jon Bohlin, Anja Bråthen Kristoffersen, Solve Sæbø, Jonas Warringer, Lars Snipen BMC Bioinformatics 2012, 13:97 (14 May 2012)
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SIS: a program to generate draft genome sequence
scaffolds for prokaryotes
Zanoni Dias, Ulisses Dias, Joao C Setubal BMC Bioinformatics 2012, 13:96 (14 May 2012)
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3DMolNavi: A web-based retrieval and navigation tool for flexible molecular shape comparison
Yu-Shen Liu, Meng Wang, Jean-Claude Paul, Karthik Ramani BMC Bioinformatics 2012, 13:95 (14 May 2012)
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Integrating biological knowledge into variable selection: an empirical Bayes approach with an application in cancer biology
Steven M Hill, Richard M Neve, Nora Bayani, Wen-Lin Kuo, Safiyyah Ziyad, Paul T Spellman, Joe W Gray, Sach Mukherjee BMC Bioinformatics 2012, 13:94 (11 May 2012)
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