Supplements
Editor-in-Chief Melissa Norton, MD
Biology Editor Penelope Webb, PhD
In-house Editor Tim Sands PhD
BMC Bioinformatics publishes selected research, proceedings and collections of thematic reviews as supplements. All articles published in supplements are subject to peer review and are free to access online. The journal also publishes supplements containing meeting abstracts.
Contents of Volume 9 Suppl 6
Symposium of Computations in Bioinformatics and Bioscience (SCBB07)
Research
from Symposium of Computations in Bioinformatics and Bioscience (SCBB07)
Iowa City, Iowa, USA. 13
15 August 2007
Edited by Guoqing Lu, Jun Ni, Thomas L Casavant and Brian Athey
Introduction
Highlighting computations in bioscience and bioinformatics: review of the Symposium of Computations in Bioinformatics and Bioscience (SCBB07) Guoqing Lu, Jun Ni BMC Bioinformatics 2008, 9 (Suppl 6):S1 (28 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
MLIP: using multiple processors to compute the posterior probability of linkage Manika Govil, Alberto M Segre, Veronica J Vieland BMC Bioinformatics 2008, 9 (Suppl 6):S2 (28 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Evolutionary conservation of DNA-contact residues in DNA-binding domains Yao-Lin Chang, Huai-Kuang Tsai, Cheng-Yan Kao, Yung-Chian Chen, Yuh-Jyh Hu, Jinn-Moon Yang BMC Bioinformatics 2008, 9 (Suppl 6):S3 (28 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
A topological transformation in evolutionary tree search methods based on maximum likelihood combining p-ECR and neighbor joining Mao-Zu Guo, Jian-Fu Li, Yang Liu BMC Bioinformatics 2008, 9 (Suppl 6):S4 (28 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Protein structural class prediction based on an improved statistical strategy Fei Gu, Hang Chen, Jun Ni BMC Bioinformatics 2008, 9 (Suppl 6):S5 (28 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
BioGraphE: high-performance bionetwork analysis using the Biological Graph Environment George Chin Jr, Daniel G Chavarria, Grant C Nakamura, Heidi J Sofia BMC Bioinformatics 2008, 9 (Suppl 6):S6 (28 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Asymmetric bagging and feature selection for activities prediction of drug molecules Guo-Zheng Li, Hao-Hua Meng, Wen-Cong Lu, Jack Y Yang, Mary Qu Yang BMC Bioinformatics 2008, 9 (Suppl 6):S7 (28 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Dimension reduction with redundant gene elimination for tumor classification Xue-Qiang Zeng, Guo-Zheng Li, Jack Y Yang, Mary Qu Yang, Geng-Feng Wu BMC Bioinformatics 2008, 9 (Suppl 6):S8 (28 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Comparative analyses of bidirectional promoters in vertebrates Mary Qu Yang, James Taylor, Laura Elnitski BMC Bioinformatics 2008, 9 (Suppl 6):S9 (28 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Application of the Linux cluster for exhaustive window haplotype analysis using the FBAT and Unphased programs Hiroyuki Mishima, Andrew C Lidral, Jun Ni BMC Bioinformatics 2008, 9 (Suppl 6):S10 (28 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Drug interaction prediction using ontology-driven hypothetical assertion framework for pathway generation followed by numerical simulation Takeshi Arikuma, Sumi Yoshikawa, Ryuzo Azuma, Kentaro Watanabe, Kazumi Matsumura, Akihiko Konagaya BMC Bioinformatics 2008, 9 (Suppl 6):S11 (28 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Genetic weighted k-means algorithm for clustering large-scale gene expression data Fang-Xiang Wu BMC Bioinformatics 2008, 9 (Suppl 6):S12 (28 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Quality assessment of peptide tandem mass spectra Fang-Xiang Wu, Pierre Gagn , Arnaud Droit, Guy G Poirier BMC Bioinformatics 2008, 9 (Suppl 6):S13 (28 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Improving the power for detecting overlapping genes from multiple DNA microarray-derived gene lists Xutao Deng, Jun Xu, Charles Wang BMC Bioinformatics 2008, 9 (Suppl 6):S14 (28 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
An improved string composition method for sequence comparison Guoqing Lu, Shunpu Zhang, Xiang Fang BMC Bioinformatics 2008, 9 (Suppl 6):S15 (28 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
MCM-test: a fuzzy-set-theory-based approach to differential analysis of gene pathways Lily R Liang, Vinay Mandal, Yi Lu, Deepak Kumar BMC Bioinformatics 2008, 9 (Suppl 6):S16 (28 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Quantitative analysis of numerical solvers for oscillatory biomolecular system models Chang F Quo, May D Wang BMC Bioinformatics 2008, 9 (Suppl 6):S17 (28 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
ArrayWiki: an enabling technology for sharing public microarray data repositories and meta-analyses Todd H Stokes, JT Torrance, Henry Li, May D Wang BMC Bioinformatics 2008, 9 (Suppl 6):S18 (28 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
A practical comparison of two K-Means clustering algorithms Gregory A Wilkin, Xiuzhen Huang BMC Bioinformatics 2008, 9 (Suppl 6):S19 (28 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
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