Supplements
Editor-in-Chief Melissa Norton, MD
Biology Editor Penelope Webb, PhD
In-house Editor Tim Sands PhD
BMC Bioinformatics publishes selected research, proceedings and collections of thematic reviews as supplements. All articles published in supplements are subject to peer review and are free to access online. The journal also publishes supplements containing meeting abstracts.
Contents of Volume 8 Suppl 4
The Second Automated Function Prediction Meeting
Proceedings
from The Second Automated Function Prediction Meeting
La Jolla, CA, USA. 30 August
1 September 2006
Edited by Ana PC Rodrigues, Barry J Grant, Adam Godzik and Iddo Friedberg
Introduction
The 2006 Automated Function Prediction Meeting Ana PC Rodrigues, Barry J Grant, Adam Godzik, Iddo Friedberg BMC Bioinformatics 2007, 8 (Suppl 4):S1 (22 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
SVM-Fold: a tool for discriminative multi-class protein fold and superfamily recognition Iain Melvin, Eugene Ie, Rui Kuang, Jason Weston, William Stafford Noble, Christina Leslie BMC Bioinformatics 2007, 8 (Suppl 4):S2 (22 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
CORRIE: enzyme sequence annotation with confidence estimates Benjamin Audit, Emmanuel D Levy, Wally R Gilks, Leon Goldovsky, Christos A Ouzounis BMC Bioinformatics 2007, 8 (Suppl 4):S3 (22 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
The AnnoLite and AnnoLyze programs for comparative annotation of protein structures Marc A Marti-Renom, Andrea Rossi, F BMC Bioinformatics 2007, 8 (Suppl 4):S4 (22 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
Using structural motif descriptors for sequence-based binding site prediction Andreas Henschel, Christof Winter, Wan Kyu Kim, Michael Schroeder BMC Bioinformatics 2007, 8 (Suppl 4):S5 (22 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
Gene function prediction based on genomic context clustering and discriminative learning: an application to bacteriophages Jason Li, Saman K Halgamuge, Christopher I Kells, Sen-Lin Tang BMC Bioinformatics 2007, 8 (Suppl 4):S6 (22 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
An improved method for identifying functionally linked proteins using phylogenetic profiles Shawn Cokus, Sayaka Mizutani, Matteo Pellegrini BMC Bioinformatics 2007, 8 (Suppl 4):S7 (22 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
Using indirect protein interactions for the prediction of Gene Ontology functions Hon Nian Chua, Wing-Kin Sung, Limsoon Wong BMC Bioinformatics 2007, 8 (Suppl 4):S8 (22 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
A robust and efficient algorithm for the shape description of protein structures and its application in predicting ligand binding sites Lei Xie, Philip E Bourne BMC Bioinformatics 2007, 8 (Suppl 4):S9 (22 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
Clustering protein environments for function prediction: finding PROSITE motifs in 3D Sungroh Yoon, Jessica C Ebert, Eui-Young Chung, Giovanni De Micheli, Russ B Altman BMC Bioinformatics 2007, 8 (Suppl 4):S10 (22 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
BMC Bioinformatics Volumes
1 September 2006
tima Al-Shahrour, Fred P Davis, Ursula Pieper, Joaqu
n Dopazo, Andrej Sali