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Construction of recB-recD genetic fusion and functional analysis of RecBDC fusion enzyme in Escherichia coli
Oytun Portakal, Pakize Doğan BMC Biochemistry 2008, 9:27 (10 October 2008)
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Immunoaffinity purification and characterization of mitochondrial membrane-bound D-3-hydroxybutyrate dehydrogenase from Jaculus orientalis
Driss Mountassif, Pierre Andreoletti, Zakaria El Kebbaj, Adnane Moutaouakkil, Mustapha Cherkaoui-Malki, Norbert Latruffe, M'hammed El Kebbaj BMC Biochemistry 2008, 9:26 (30 September 2008)
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The Serine/threonine kinase Stk33 exhibits autophosphorylation and phosphorylates the intermediate filament protein Vimentin
Bastienne Brauksiepe, Alejandro O Mujica, Harald Herrmann, Erwin R Schmidt BMC Biochemistry 2008, 9:25 (23 September 2008)
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Inversion of allosteric effect of arginine on N-acetylglutamate synthase, a molecular marker for evolution of tetrapods
Nantaporn Haskins, Maria Panglao, Qiuhao Qu, Himani Majumdar, Juan Cabrera-Luque, Hiroki Morizono, Mendel Tuchman, Ljubica Caldovic BMC Biochemistry 2008, 9:24 (18 September 2008)
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Editor’s summary
Arginine allosterically inhibits N-acetylglutamate synthase in aquatic organisms but activates it in terrestrial vertebrates because of different conformational dynamics, a change that occurred gradually during the evolution of amphibians from water to land.
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YB-1 promotes microtubule assembly in vitro through interaction with tubulin and microtubules
Konstantin G Chernov, Alain Mechulam, Nadezhda V Popova, David Pastre, Elena S Nadezhdina, Olga V Skabkina, Nina A Shanina, Victor D Vasiliev, Anne Tarrade, Judith Melki, Vandana Joshi, Sonia Baconnais, Flavio Toma, Lev P Ovchinnikov, Patrick A Curmi BMC Biochemistry 2008, 9:23 (15 September 2008)
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Mitochondrial oxidative phosphorylation in autosomal dominant optic atrophy
Vladimir I Mayorov, Angela J Lowrey, Valerie Biousse, Nancy J Newman, Susan D Cline, Michael D Brown BMC Biochemistry 2008, 9:22 (10 September 2008)
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The central proline rich region of POB1/REPS2 plays a regulatory role in epidermal growth factor receptor endocytosis by binding to 14-3-3 and SH3 domain-containing proteins
Laura Tomassi, Anna Costantini, Salvatore Corallino, Elena Santonico, Martina Carducci, Gianni Cesareni, Luisa Castagnoli BMC Biochemistry 2008, 9:21 (22 July 2008)
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Functional and biochemical characterization of the 20S proteasome in a yeast temperature-sensitive mutant, rpt6-1
Aktar Chouduri, Toshinobu Tokumoto, Hideo Dohra, Takashi Ushimaru, Shinpei Yamada BMC Biochemistry 2008, 9:20 (21 July 2008)
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Purification and characterization of recombinant human renin for X-ray crystallization studies
Zhongren Wu, Maria G Cappiello, Boyd B Scott, Yuri Bukhtiyarov, Gerard M McGeehan BMC Biochemistry 2008, 9:19 (26 June 2008)
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Biochemical characterization and cellular imaging of a novel, membrane permeable fluorescent cAMP analog
Daniela Moll, Anke Prinz, Cornelia M Brendel, Marco Berrera, Katrin Guske, Manuela Zaccolo, Hans-Gottfried Genieser, Friedrich W Herberg BMC Biochemistry 2008, 9:18 (25 June 2008)
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Molecular evolution of B6 enzymes: Binding of pyridoxal-5'-phosphate and Lys41Arg substitution turn ribonuclease A into a model B6 protoenzyme
Rosa A Vacca, Sergio Giannattasio, Guido Capitani, Ersilia Marra, Philipp Christen BMC Biochemistry 2008, 9:17 (19 June 2008)
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Modulation of the pharmacological effects of enzymatically-active PLA2 by BTL-2, an isolectin isolated from the Bryothamnion triquetrum red alga
Simone CB Oliveira, Fabiana V Fonseca, Edson Antunes, Enilton A Camargo, Rafael P Morganti, Ricardo Aparício, Daniela O Toyama, Luís OS Beriam, Eudismar V Nunes, Benildo S Cavada, Celso S Nagano, Alexandre H Sampaio, Kyria S Nascimento, Marcos H Toyama BMC Biochemistry 2008, 9:16 (6 June 2008)
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Characterization of Bacillus anthracis arginase: effects of pH, temperature, and cell viability on metal preference
Ryan J Viator, Richard F Rest, Ellen Hildebrandt, David J McGee BMC Biochemistry 2008, 9:15 (3 June 2008)
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Isolation, characterization and molecular cloning of Duplex-Specific Nuclease from the hepatopancreas of the Kamchatka crab
Veronika E Anisimova, Denis V Rebrikov, Dmitry A Shagin, Valery B Kozhemyako, Natalia I Menzorova, Dmitry B Staroverov, Rustam Ziganshin, Laura L Vagner, Valery A Rasskazov, Sergey A Lukyanov, Alex S Shcheglov BMC Biochemistry 2008, 9:14 (21 May 2008)
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The Mycobacterium tuberculosis Rv2540c DNA sequence encodes a bifunctional chorismate synthase
Fernanda Ely, José ES Nunes, Evelyn K Schroeder, Jeverson Frazzon, Mário S Palma, Diógenes S Santos, Luiz A Basso BMC Biochemistry 2008, 9:13 (29 April 2008)
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Regulation of 5'-adenosine monophosphate deaminase in the freeze tolerant wood frog, Rana sylvatica
Christopher A Dieni, Kenneth B Storey BMC Biochemistry 2008, 9:12 (22 April 2008)
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Editor’s summary
In the freeze-tolerant wood frog, Rana sylvatica, long-term viability in frozen muscles requires fine tuning of cellular energetics through modulation of the kinetic parameters and the phosphorylation state of an adenosine deaminase enzyme.
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A new classification system for bacterial Rieske non-heme iron aromatic ring-hydroxylating oxygenases
Ohgew Kweon, Seong-Jae Kim, Songjoon Baek, Jong-Chan Chae, Michael D Adjei, Dong-Heon Baek, Young-Chang Kim, Carl E Cerniglia BMC Biochemistry 2008, 9:11 (3 April 2008)
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Characterization and site-directed mutagenesis of Wzb, an O-phosphatase from Lactobacillus rhamnosus
Gisèle LaPointe, Danièle Atlan, Christophe Gilbert BMC Biochemistry 2008, 9:10 (3 April 2008)
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Pro-protein convertases control the maturation and processing of the iron-regulatory protein, RGMc/hemojuvelin
David Kuninger, Robin Kuns-Hashimoto, Mahta Nili, Peter Rotwein BMC Biochemistry 2008, 9:9 (2 April 2008)
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The pyrroloquinoline quinone biosynthesis pathway revisited: A structural approach
Sandra Puehringer, Moritz Metlitzky, Robert Schwarzenbacher BMC Biochemistry 2008, 9:8 (27 March 2008)
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Editor’s summary
Putative roles for six proteins in the biosynthesis pathway of pyrroloquinoline quinone, a bacterial redox-active cofactor for numerous alcohol and aldose dehydrogenases, have been assigned in Klebsiella by integrating structural, genomic and functional data.
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Prion protein insertional mutations increase aggregation propensity but not fiber stability
Tejas Kalastavadi, Heather L True BMC Biochemistry 2008, 9:7 (17 March 2008)
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Functional role of the additional domains in inulosucrase (IslA) from Leuconostoc citreum CW28
Sandra del Moral, Clarita Olvera, Maria Rodriguez, Agustin Munguia BMC Biochemistry 2008, 9:6 (31 January 2008)
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Thermal dependency of RAG1 self-association properties
Pallabi De, Shuying Zhao, Lori M Gwyn, LeAnn J Godderz, Mandy M Peak, Karla K Rodgers BMC Biochemistry 2008, 9:5 (30 January 2008)
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Components of the ubiquitin-proteasome pathway compete for surfaces on Rad23 family proteins
Amanda M Goh, Kylie J Walters, Suzanne Elsasser, Rati Verma, Raymond J Deshaies, Daniel Finley, Peter M Howley BMC Biochemistry 2008, 9:4 (30 January 2008)
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Blocking binding of Bacillus thuringiensis Cry1Aa to Bombyx mori cadherin receptor results in only a minor reduction of toxicity
Taek H You, Mi K Lee, Jeremy L Jenkins, Oscar Alzate, Donald H Dean BMC Biochemistry 2008, 9:3 (24 January 2008)
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Editor’s summary
Cry1Aa toxin from Bacillus thuringiensis has been successfully engineered to reduce its biological activity against a non-target insect, the silk worm Bombyx mori, while retaining activity against a pest species, the gypsy moth Lymantria dispar.
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The effects of the surface-exposed residues on the binding and hydrolytic activities of Vibrio carchariae chitinase A
Supansa Pantoom, Chomphunuch Songsiriritthigul, Wipa Suginta BMC Biochemistry 2008, 9:2 (21 January 2008)
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Association of SAP130/SF3b-3 with Cullin-RING ubiquitin ligase complexes and its regulation by the COP9 signalosome
Suchithra Menon, Tomohiko Tsuge, Naoshi Dohmae, Koji Takio, Ning Wei BMC Biochemistry 2008, 9:1 (3 January 2008)
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Binding to DPF-motif by the POB1 EH domain is responsible for POB1-Eps15 interaction
Elena Santonico, Simona Panni, Mattia Falconi, Luisa Castagnoli, Gianni Cesareni BMC Biochemistry 2007, 8:29 (21 December 2007)
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The effects of NaCl concentration and pH on the stability of hyperthermophilic protein Ssh10b
Yong-Jin Mao, Xiang-Rong Sheng, Xian-Ming Pan BMC Biochemistry 2007, 8:28 (21 December 2007)
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Downregulation of COP9 signalosome subunits differentially affects the CSN complex and target protein stability
Andreas Peth, Christoph Berndt, Wolfgang Henke, Wolfgang Dubiel BMC Biochemistry 2007, 8:27 (19 December 2007)
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Glutathionylation of beta-actin via a cysteinyl sulfenic acid intermediary
Magnus Johansson, Mathias Lundberg BMC Biochemistry 2007, 8:26 (10 December 2007)
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Metabolic signature of breast cancer cell line MCF-7: profiling of modified nucleosides via LC-IT MS coupling
Dino Bullinger, Hans Neubauer, Tanja Fehm, Stefan Laufer, Christoph H Gleiter, Bernd Kammerer BMC Biochemistry 2007, 8:25 (29 November 2007)
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Membrane binding of the neuronal calcium sensor recoverin – modulatory role of the charged carboxy-terminus
Ivan I Senin, Valeriya A Churumova, Pavel P Philippov, Karl-Wilhelm Koch BMC Biochemistry 2007, 8:24 (22 November 2007)
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The FTO (fat mass and obesity associated) gene codes for a novel member of the non-heme dioxygenase superfamily
Luis Sanchez-Pulido, Miguel A Andrade-Navarro BMC Biochemistry 2007, 8:23 (8 November 2007)
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Recognition of essential purines by the U1A protein
Yulia Benitex, Anne M Baranger BMC Biochemistry 2007, 8:22 (2 November 2007)
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Aminopeptidase B, a glucagon-processing enzyme: site directed mutagenesis of the Zn2+-binding motif and molecular modelling
Viet-Laï Pham, Marie-Sandrine Cadel, Cécile Gouzy-Darmon, Chantal Hanquez, Margery C Beinfeld, Pierre Nicolas, Catherine Etchebest, Thierry Foulon BMC Biochemistry 2007, 8:21 (31 October 2007)
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A study on the two binding sites of hexokinase on brain mitochondria
Abolfazl Golestani, Hassan Ramshini, Mohsen Nemat-Gorgani BMC Biochemistry 2007, 8:20 (20 October 2007)
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The subunit composition of human extracellular superoxide dismutase (EC-SOD) regulate enzymatic activity
Steen V Petersen, Zuzana Valnickova, Tim D Oury, James D Crapo, Niels Chr Nielsen, Jan J Enghild BMC Biochemistry 2007, 8:19 (15 October 2007)
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R7-binding protein targets the G protein β5/R7-regulator of G protein signaling complex to lipid rafts in neuronal cells and brain
Lylia Nini, Abdul A Waheed, Leelamma M Panicker, Meggan Czapiga, Jian-Hua Zhang, William F Simonds BMC Biochemistry 2007, 8:18 (19 September 2007)
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Thiamine diphosphate adenylyl transferase from E. coli: functional characterization of the enzyme synthesizing adenosine thiamine triphosphate
Alexander F Makarchikov, Alain Brans, Lucien Bettendorff BMC Biochemistry 2007, 8:17 (16 August 2007)
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C-terminal processing of yeast Spt7 occurs in the absence of functional SAGA complex
Stephen MT Hoke, Gaoyang Liang, A Irina Mutiu, Julie Genereaux, Christopher J Brandl BMC Biochemistry 2007, 8:16 (8 August 2007)
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Module structure of interphotoreceptor retinoid-binding protein (IRBP) may provide bases for its complex role in the visual cycle – structure/function study of Xenopus IRBP
Federico Gonzalez-Fernandez, Claxton A Baer, Debashis Ghosh BMC Biochemistry 2007, 8:15 (4 August 2007)
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Editor’s summary
Interphotoreceptor retinoid-binding protein of Xenopus contains four similar modules that enable its complex functionality by boosting ligand carrying capacity and retinoid transport between rods, cones and other cells during the visual cycle.
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ExplorEnz: a MySQL database of the IUBMB enzyme nomenclature
Andrew G McDonald, Sinéad Boyce, Gerard P Moss, Henry BF Dixon, Keith F Tipton BMC Biochemistry 2007, 8:14 (27 July 2007)
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Effects of the deletion of the Escherichia coli frataxin homologue CyaY on the respiratory NADH:ubiquinone oxidoreductase
Thomas Pohl, Julia Walter, Stefan Stolpe, Joel Soufo, Peter L Grauman, Thorsten Friedrich BMC Biochemistry 2007, 8:13 (24 July 2007)
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The N-terminal domain of apolipoprotein B-100: structural characterization by homology modeling
Hassan Al-Ali, Hassan M Khachfe BMC Biochemistry 2007, 8:12 (22 July 2007)
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Comparison of interactions between beta-hairpin decapeptides and SDS/DPC micelles from experimental and simulation data
Allison A Langham, Alan J Waring, YN Kaznessis BMC Biochemistry 2007, 8:11 (16 July 2007)
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Presence of thiamine pyrophosphate in mammalian peroxisomes
Patrizia Fraccascia, Mieke Sniekers, Minne Casteels, Paul P Van Veldhoven BMC Biochemistry 2007, 8:10 (27 June 2007)
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Role of the linker region in the expression of Rhizopus oryzae glucoamylase
Shu-Chuan Lin, Wei-Ting Liu, Shi-Hwei Liu, Wei-I Chou, Bor-Kai Hsiung, I-Ping Lin, Chia-Chin Sheu, Margaret Dah-Tsyr Chang BMC Biochemistry 2007, 8:9 (25 June 2007)
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Editor’s summary
Fungal glucoamylase from Rhizopus oryzae, important for industrial glucose production, has a starch binding domain and catalytic module connected by a linker domain that is involved in expression, formation and stabilization of the active enzyme.
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Preferential inhibition of xanthine oxidase by 2-amino-6-hydroxy-8-mercaptopurine and 2-amino-6-purine thiol
Sukirti Kalra, Gopabandhu Jena, Kulbhushan Tikoo, Anup Mukhopadhyay BMC Biochemistry 2007, 8:8 (18 May 2007)
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Revalidation and rationale for high pKa values of unconjugated bilirubin
J Donald Ostrow, Pasupati Mukerjee BMC Biochemistry 2007, 8:7 (2 May 2007)
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