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Wellcome Trust Sanger Institute's Articles

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Page 1 of 43

Research

A graph extension of the positional Burrows–Wheeler transform and its applications

Adam M. Novak, Erik Garrison and Benedict Paten

Algorithms for Molecular Biology 2017 12:18

Published on: 11 July 2017
Research article

Differential gene expression at different stages of mesocarp development in high- and low-yielding oil palm

Yick Ching Wong, Huey Fang Teh, Katharina Mebus, Tony Eng Keong Ooi, Qi Bin Kwong, Ka Loo Koo, Chuang Kee Ong, Sean Mayes, Fook Tim Chew, David R. Appleton and Harikrishna Kulaveerasingam

BMC Genomics 2017 18:470

Published on: 21 June 2017
Research

“Like sugar in milk”: reconstructing the genetic history of the Parsi population

Gyaneshwer Chaubey, Qasim Ayub, Niraj Rai, Satya Prakash, Veena Mushrif-Tripathy, Massimo Mezzavilla, Ajai Kumar Pathak, Rakesh Tamang, Sadaf Firasat, Maere Reidla, Monika Karmin, Deepa Selvi Rani, Alla G. Reddy, Jüri Parik, Ene Metspalu, Siiri Rootsi…

Genome Biology 2017 18:110

Published on: 14 June 2017
Software

Literature evidence in open targets - a target validation platform

Şenay Kafkas, Ian Dunham and Johanna McEntyre

Journal of Biomedical Semantics 2017 8:20

Published on: 6 June 2017
Software

Dead simple OWL design patterns

David Osumi-Sutherland, Melanie Courtot, James P. Balhoff and Christopher Mungall

Journal of Biomedical Semantics 2017 8:18

Published on: 5 June 2017
Research article

Defining the ABC of gene essentiality in streptococci

Amelia R. L. Charbonneau, Oliver P. Forman, Amy K. Cain, Graham Newland, Carl Robinson, Mike Boursnell, Julian Parkhill, James A. Leigh, Duncan J. Maskell and Andrew S. Waller

BMC Genomics 2017 18:426

Published on: 31 May 2017
Research article

Accurate characterization of the IFITM locus using MiSeq and PacBio sequencing shows genetic variation in Galliformes

Irene Bassano, Swee Hoe Ong, Nathan Lawless, Thomas Whitehead, Mark Fife and Paul Kellam

BMC Genomics 2017 18:419

Published on: 30 May 2017
Erratum

Erratum to: DeepCpG: accurate prediction of single-cell DNA methylation states using deep learning

Christof Angermueller, Heather J. Lee, Wolf Reik and Oliver Stegle

Genome Biology 2017 18:90

Published on: 12 May 2017

The original article was published in Genome Biology 2017 18:67
Research

Artemisinin resistance without pfkelch13 mutations in Plasmodium falciparum isolates from Cambodia

Angana Mukherjee, Selina Bopp, Pamela Magistrado, Wesley Wong, Rachel Daniels, Allison Demas, Stephen Schaffner, Chanaki Amaratunga, Pharath Lim, Mehul Dhorda, Olivo Miotto, Charles Woodrow, Elizabeth A. Ashley, Arjen M. Dondorp, Nicholas J. White, Dyann Wirth…

Malaria Journal 2017 16:195

Published on: 12 May 2017
Research article

European Chlamydia abortus livestock isolate genomes reveal unusual stability and limited diversity, reflected in geographical signatures

H. M. B. Seth-Smith, Leonor Sánchez Busó, M. Livingstone, M. Sait, S. R. Harris, K. D. Aitchison, Evangelia Vretou, V. I. Siarkou, K. Laroucau, K. Sachse, D. Longbottom and N. R. Thomson

BMC Genomics 2017 18:344

Published on: 4 May 2017
Research

Asymptomatic Plasmodium vivax infections induce robust IgG responses to multiple blood-stage proteins in a low-transmission region of western Thailand

Rhea J. Longley, Camila T. França, Michael T. White, Chalermpon Kumpitak, Patiwat Sa-angchai, Jakub Gruszczyk, Jessica B. Hostetler, Anjali Yadava, Christopher L. King, Rick M. Fairhurst, Julian C. Rayner, Wai-Hong Tham, Wang Nguitragool, Jetsumon Sattabongkot and Ivo Mueller

Malaria Journal 2017 16:178

Published on: 28 April 2017
Review

The impact of rare and low-frequency genetic variants in common disease

Lorenzo Bomba, Klaudia Walter and Nicole Soranzo

Genome Biology 2017 18:77

Published on: 27 April 2017
Research

Significant heterogeneity in Wolbachia copy number within and between populations of Onchocerca volvulus

Samuel Armoo, Stephen R. Doyle, Mike Y. Osei-Atweneboana and Warwick N. Grant

Parasites & Vectors 2017 10:188

Published on: 18 April 2017
Method

DeepCpG: accurate prediction of single-cell DNA methylation states using deep learning

Christof Angermueller, Heather J. Lee, Wolf Reik and Oliver Stegle

Genome Biology 2017 18:67

Published on: 11 April 2017

The Erratum to this article has been published in Genome Biology 2017 18:90
Research

Multi-tissue DNA methylation age predictor in mouse

Thomas M. Stubbs, Marc Jan Bonder, Anne-Katrien Stark, Felix Krueger, Ferdinand von Meyenn, Oliver Stegle and Wolf Reik

Genome Biology 2017 18:68

Published on: 11 April 2017
Meeting report

Challenges for achieving safe and effective radical cure of Plasmodium vivax: a round table discussion of the APMEN Vivax Working Group

Kamala Thriemer, Benedikt Ley, Albino Bobogare, Lek Dysoley, Mohammad Shafiul Alam, Ayodhia P. Pasaribu, Jetsumon Sattabongkot, Elodie Jambert, Gonzalo J. Domingo, Robert Commons, Sarah Auburn, Jutta Marfurt, Angela Devine, Mohammad M. Aktaruzzaman, Nayeem Sohel, Rinzin Namgay…

Malaria Journal 2017 16:141

Published on: 5 April 2017
Research Highlight

Are cells from a snowman realistic? Cryopreserved tissues as a source for single-cell RNA-sequencing experiments

Felipe A. Vieira Braga, Sarah A. Teichmann and Michael J. T. Stubbington

Genome Biology 2017 18:54

Published on: 24 March 2017
Technical advance

Orchestrating differential data access for translational research: a pilot implementation

Marco Brandizi, Olga Melnichuk, Raffael Bild, Florian Kohlmayer, Benedicto Rodriguez-Castro, Helmut Spengler, Klaus A. Kuhn, Wolfgang Kuchinke, Christian Ohmann, Timo Mustonen, Mikael Linden, Tommi Nyrönen, Ilkka Lappalainen, Alvis Brazma and Ugis Sarkans

BMC Medical Informatics and Decision Making 2017 17:30

Published on: 23 March 2017
Rapid communication

Incorporation of a hinge domain improves the expansion of chimeric antigen receptor T cells

Le Qin, Yunxin Lai, Ruocong Zhao, Xinru Wei, Jianyu Weng, Peilong Lai, Baiheng Li, Simiao Lin, Suna Wang, Qiting Wu, Qiubin Liang, Yangqiu Li, Xuchao Zhang, Yilong Wu, Pentao Liu, Yao Yao…

Journal of Hematology & Oncology 2017 10:68

Published on: 13 March 2017
Software

Reactome pathway analysis: a high-performance in-memory approach

Antonio Fabregat, Konstantinos Sidiropoulos, Guilherme Viteri, Oscar Forner, Pablo Marin-Garcia, Vicente Arnau, Peter D’Eustachio, Lincoln Stein and Henning Hermjakob

BMC Bioinformatics 2017 18:142

Published on: 2 March 2017

Page 1 of 43

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Wellcome Trust Sanger Institute

Wellcome Trust Sanger Institute's Articles

A graph extension of the positional Burrows–Wheeler transform and its applications

Differential gene expression at different stages of mesocarp development in high- and low-yielding oil palm

“Like sugar in milk”: reconstructing the genetic history of the Parsi population

Literature evidence in open targets - a target validation platform

Dead simple OWL design patterns

Defining the ABC of gene essentiality in streptococci

Accurate characterization of the IFITM locus using MiSeq and PacBio sequencing shows genetic variation in Galliformes

Erratum to: DeepCpG: accurate prediction of single-cell DNA methylation states using deep learning

Artemisinin resistance without pfkelch13 mutations in Plasmodium falciparum isolates from Cambodia

European Chlamydia abortus livestock isolate genomes reveal unusual stability and limited diversity, reflected in geographical signatures

Asymptomatic Plasmodium vivax infections induce robust IgG responses to multiple blood-stage proteins in a low-transmission region of western Thailand

The impact of rare and low-frequency genetic variants in common disease

Significant heterogeneity in Wolbachia copy number within and between populations of Onchocerca volvulus

DeepCpG: accurate prediction of single-cell DNA methylation states using deep learning

Multi-tissue DNA methylation age predictor in mouse

Challenges for achieving safe and effective radical cure of Plasmodium vivax: a round table discussion of the APMEN Vivax Working Group

Are cells from a snowman realistic? Cryopreserved tissues as a source for single-cell RNA-sequencing experiments

Orchestrating differential data access for translational research: a pilot implementation

Incorporation of a hinge domain improves the expansion of chimeric antigen receptor T cells

Reactome pathway analysis: a high-performance in-memory approach

Find the right journal

Looking for a suitable journal?

Have a manuscript ready?

Publish Your Manuscript