Table 1

Amino acid sequences

System

PDB code

Sequence


Trp-cage

1L2Y

NLYIQ WLKDG GPSSG RPPPS

E6apn1

1RIJ

Ac-ALQEL LGQWL KDGGP SSGRP PPS-NH2

C

Ac-KETAA AKFER AHA-NH2

EK

Ac-YAEAA KAAEA AKAF-NH2

Fs

Suc-AAAAA AAARA AAARA AAARA A-NH2

GCN4tp

2OVN

NYHLE NEVAR LKKLV GE

HPLC-6

1WFA

DTASD AAAAA ALTAA NAKAA AELTA ANAAA AAAAT AR-NH2

Chignolin

1UAO

GYDPE TGTWG

MBH12

1J4M

RGKWT YNGIT YEGR

GB1p

GEWTY DDATK TFTVT E

GB1m2

GEWTY NPATG KFTVT E

GB1m3

KKWTY NPATG KFTVQ E

trpzip1

1LE0

SWTWE GNKWT WK-NH2

trpzip2

1LE1

SWTWE NGKWT WK-NH2

betanova

RGWSV QNGKY TNNGK TTEGR

LLM

RGWSL QNGKY TLNGK TMEGR

beta3s

TWIQN GSTKW YQNGS TKIYT

AB zipper

1U2U

Ac-EVAQL EKEVA QLEAE NYQLE QEVAQ LEHEG-NH2

Ac-EVQAL KKRVQ ALKAR NYALK QKVQA LRHKG-NH2

Top7-CFR

2GJH

ERVRI SITAR TKKEA EKFAA ILIKV FAELG YNDIN VTWDG DTVTV EGQL

GS-α3 W

1LQ7

GSRVK ALEEK VKALE EKVKA LGGGG RIEEL KKKWE ELKKK IEELG GGGEV KKVEE EVKKL EEEIK KL


Suc stands for succinylic acid.

Irbäck et al. PMC Biophysics 2009 2:2   doi:10.1186/1757-5036-2-2

Open Data