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Resolution: standard / high Figure 5.
Snapshots of equilibrated MC simulations on a cylinder. Snapshots of equilibrated MC simulations on a cylinder. We use 10000 monomers in
panel (b) and 2400 in all the other panels, which represents a surface density for
FtsZ comparable to the one estimated in vivo [3]. (a-b) The interaction parameters extracted from AFM images on planar surfaces are
directly used on the cylindrical lattice. (c) Symmetric bending energies βU± = 1, and Ua and Ub as in the planar case. (d) Ua, U+ and U- are kept as in the planar model values and a weak off-plane spontaneous curvature
is added (see file 1). (e) Bonding energy Ub decreased by 2.5% away from a central cylindrical segment(see Additional file 1). (f) Similar to (e) but with a central deformation of a cylinder (see text and Additional
file 1). All the observed structures were spontaneously formed from an initial random distribution
of the monomers. The hemispherical caps are plotted to represent the bacterial shape,
but the actual MC simulations were done with toroidal boundary conditions.
Paez et al. PMC Biophysics 2009 2:8 doi:10.1186/1757-5036-2-8 |