Table 2 |
|||||
|
Performance Evaluation of CUDASW++ |
|||||
|
Queries |
Length |
Single-GPU version |
Multi-GPU version |
||
|
|
|||||
|
Time(s) |
GCUPS |
Time(s) |
GCUPS |
||
|
|
|||||
|
P02232 |
144 |
2.33 |
9.039 |
1.97 |
10.660 |
|
P01111 |
189 |
3.01 |
9.163 |
2.47 |
11.194 |
|
P05013 |
189 |
3.01 |
9.163 |
2.40 |
11.513 |
|
P14942 |
222 |
3.48 |
9.333 |
2.87 |
11.304 |
|
P00762 |
246 |
3.82 |
9.402 |
3.10 |
11.591 |
|
P07327 |
375 |
5.80 |
9.453 |
4.21 |
13.034 |
|
P01008 |
464 |
7.08 |
9.582 |
4.67 |
14.532 |
|
P10635 |
497 |
7.66 |
9.483 |
4.99 |
14.566 |
|
P25705 |
553 |
8.61 |
9.390 |
5.49 |
14.711 |
|
P03435 |
567 |
8.72 |
9.507 |
5.52 |
15.022 |
|
P42357 |
657 |
10.11 |
9.496 |
6.50 |
14.777 |
|
P21177 |
729 |
11.16 |
9.552 |
7.00 |
15.225 |
|
Q38941 |
850 |
13.02 |
9.539 |
8.15 |
15.235 |
|
O60341 |
852 |
13.03 |
9.556 |
8.11 |
15.355 |
|
P27895 |
1000 |
15.13 |
9.660 |
9.34 |
15.644 |
|
P07756 |
1500 |
22.74 |
9.642 |
14.02 |
15.640 |
|
P04775 |
2005 |
30.37 |
9.649 |
18.48 |
15.855 |
|
P19096 |
2504 |
37.89 |
9.659 |
22.79 |
16.058 |
|
P28167 |
3005 |
45.54 |
9.644 |
27.41 |
16.027 |
|
P0C6B8 |
3564 |
54.01 |
9.644 |
32.45 |
16.055 |
|
P20930 |
4061 |
61.60 |
9.635 |
36.94 |
16.070 |
|
P08519 |
4548 |
68.98 |
9.637 |
41.45 |
16.039 |
|
Q7TMA5 |
4743 |
71.91 |
9.640 |
43.18 |
16.054 |
|
P33450 |
5147 |
78.13 |
9.629 |
46.83 |
16.066 |
|
Q9UKN1 |
5478 |
83.15 |
9.629 |
49.77 |
16.087 |
|
|
|||||
|
Liu et al. BMC Research Notes 2009 2:73 doi:10.1186/1756-0500-2-73 |
|||||
