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This article is part of the supplement: Proceedings of the 2011 International Conference on Bioinformatics and Computational Biology (BIOCOMP'11)

Open Access Research

Breast cancer subtyping from plasma proteins

Fan Zhang1 and Jake Y Chen234*

Author Affiliations

1 Department of Academic and Institutional Resources and Technology, University of North Texas Health Science Center, Fort Worth 76107, USA

2 School of Informatics, Indiana University, Indianapolis, IN 46202, USA

3 Department of Computer and Information Science, School of Science, Purdue University, Indianapolis, IN 46202, USA

4 Indiana Center for Systems Biology and Personalized Medicine, Indianapolis, IN 46202, USA

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BMC Medical Genomics 2013, 6(Suppl 1):S6  doi:10.1186/1755-8794-6-S1-S6

Published: 23 January 2013

Additional files

Additional file 1:

pathway protein matrix.

Format: XLSX Size: 72KB Download file

Open Data

Additional file 2:

comparing between the four distance metrics (protein intensity, q-value, pathway profiling, and distance score function) and pathway profiling with traditional permutation.

Format: XLSX Size: 11KB Download file

Open Data