Table 2

The mean squared errors (MSE) of 10 fold cross validation from Elastic-net of genomics data against clinical stages of CRC
Genomics MSE
Integrative genomics 0.78224
Copy Number alone 0.96308
Mutation alone 0.97295
Methylation alone 0.91856
Gene expression alone 0.79906

Integrative analysis - the combined genomic data – showed the least MSE compared to separate genomics analysis. Therefore, the improvement was observed in integration of genomics data.

Lee et al.

Lee et al. BMC Medical Genomics 2013 6:54   doi:10.1186/1755-8794-6-54

Open Data